Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq276 158 2e-33 seq7 158 2e-33 seq4 129 9e-25 seq8 116 5e-21 seq1 116 5e-21 seq6 95.1 2e-14 >seq276 Length=24472 Score = 158 bits (174), Expect = 2e-33 Identities = 374/559 (67%), Gaps = 9/559 (2%) Strand=Plus/Minus Query 18149 TATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTA 18208 ||||| ||||| ||||||||| ||| | |||||| || | || || | ||||| Sbjct 23019 TATAACAAACAAGCAAAATCACAGTGCAGACCTTCGTCACGTGAAATAAGCTCGTTTGAG 22960 Query 18209 AACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAA-CTACT 18267 || |||||||| ||||||| ||| | ||||| | ||| || |||| || ||| || | Sbjct 22959 AATGTTAACCCTGGCATTAAACCGCGCTTTTTCAACCAGAAAATCGC-GCAAAAGCTTCC 22901 Query 18268 AGAAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTT 18327 || ||||| || || || || || || || || | | ||||||||||||| | || Sbjct 22900 GGAGAAGAAAATTCCTTCTACACAAGCAAATGCAACGATTCTTTCAGCAAAA--GAATCG 22843 Query 18328 ATTG-CTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCT 18386 ||| ||| |||||||| |||||| || | | ||||| || || ||| Sbjct 22842 CTTGAATCA--ATCCATTTCATTGCCCAATCAGCCTTTTTCGCGATACATGGAATTGTCT 22785 Query 18387 CTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACA 18446 | || |||| ||| || || ||||| ||||| ||||||| || || || | | Sbjct 22784 CAATTGCATGAAATAAGCGATTCTTTTCAGCAGAATCGCTTATATATGTTTCAATGAGAA 22725 Query 18447 AAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAG 18506 || ||||| |||||||| ||| |||| || || || || |||| ||| || | | | Sbjct 22724 GGGAGTACATCTCAGAATGGATGTTTTCAATTGCAATTTGGAAACCATAGAAGGCACGTG 22665 Query 18507 CCTCGG-GATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCG 18565 | |||| ||| ||| | || | |||||| | | | ||| ||| || || ||| Sbjct 22664 CTTCGGAGAT-TTGGACTTCTTTCATGAATCTTCCGGCAAGATTTTCAAGGACAATTCCG 22606 Query 18566 TCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGA 18625 || | | ||||| || || | ||| | ||||| || ||| || |||| Sbjct 22605 TCTGAGGCGGCGAAGAAGGCAAGAACGTGAGAGATGAAGTGGCGTTCGCCGTCTGTGAGG 22546 Query 18626 TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGAT 18685 |||||||| | | | ||| || |||||||||||||| | ||||| || || | | Sbjct 22545 TTGTTCCAGTGCTTGAGATCGGAGGAAAGATCAACTTCTTCGGCGGTCCAGAATGAGGCT 22486 Query 18686 TCGGCCTGTTTGTACATTT 18704 ||||| | ||||||||||| Sbjct 22485 TCGGCTTTTTTGTACATTT 22467 >seq7 Length=49172423 Score = 158 bits (174), Expect = 2e-33 Identities = 374/559 (67%), Gaps = 9/559 (2%) Strand=Plus/Plus Query 18149 TATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTA 18208 ||||| ||||| ||||||||| ||| | |||||| || | || || | ||||| Sbjct 10197069 TATAACAAACAAGCAAAATCACAGTGCAGACCTTCGTCACGTGAAATAAGCTCGTTTGAG 10197128 Query 18209 AACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAA-CTACT 18267 || |||||||| ||||||| ||| | ||||| | ||| || |||| || ||| || | Sbjct 10197129 AATGTTAACCCTGGCATTAAACCGCGCTTTTTCAACCAGAAAATCGC-GCAAAAGCTTCC 10197187 Query 18268 AGAAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTT 18327 || ||||| || || || || || || || || | | ||||||||||||| | || Sbjct 10197188 GGAGAAGAAAATTCCTTCTACACAAGCAAATGCAACGATTCTTTCAGCAAAA--GAATCG 10197245 Query 18328 ATTG-CTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCT 18386 ||| ||| |||||||| |||||| || | | ||||| || || ||| Sbjct 10197246 CTTGAATCA--ATCCATTTCATTGCCCAATCAGCCTTTTTCGCGATACATGGAATTGTCT 10197303 Query 18387 CTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACA 18446 | || |||| ||| || || ||||| ||||| ||||||| || || || | | Sbjct 10197304 CAATTGCATGAAATAAGCGATTCTTTTCAGCAGAATCGCTTATATATGTTTCAATGAGAA 10197363 Query 18447 AAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAG 18506 || ||||| |||||||| ||| |||| || || || || |||| ||| || | | | Sbjct 10197364 GGGAGTACATCTCAGAATGGATGTTTTCAATTGCAATTTGGAAACCATAGAAGGCACGTG 10197423 Query 18507 CCTCGG-GATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCG 18565 | |||| ||| ||| | || | |||||| | | | ||| ||| || || ||| Sbjct 10197424 CTTCGGAGAT-TTGGACTTCTTTCATGAATCTTCCGGCAAGATTTTCAAGGACAATTCCG 10197482 Query 18566 TCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGA 18625 || | | ||||| || || | ||| | ||||| || ||| || |||| Sbjct 10197483 TCTGAGGCGGCGAAGAAGGCAAGAACGTGAGAGATGAAGTGGCGTTCGCCGTCTGTGAGG 10197542 Query 18626 TTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGAT 18685 |||||||| | | | ||| || |||||||||||||| | ||||| || || | | Sbjct 10197543 TTGTTCCAGTGCTTGAGATCGGAGGAAAGATCAACTTCTTCGGCGGTCCAGAATGAGGCT 10197602 Query 18686 TCGGCCTGTTTGTACATTT 18704 ||||| | ||||||||||| Sbjct 10197603 TCGGCTTTTTTGTACATTT 10197621 >seq4 Length=56582383 Score = 129 bits (142), Expect = 9e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| |||| || || ||||||||||||||||| || || || || ||| Sbjct 31260253 AATGCAAATTTTTGTTAAGACTTTAACTGGAAAAACTATTACTTTGGAGGTTGAGAGTTC 31260194 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| |||| || |||||| ||| || |||||||| || || || ||||| || || Sbjct 31260193 AGATACTATTGATAATGTGAAAGCTAAGATTCAAGATAAGGAGGGTATCCCTCCTGATCA 31260134 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| || | || | ||| ||||||||||| |||||| || || | | |||||||| Sbjct 31260133 ACAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACACTTGCCGATTATAA 31260074 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037 || || ||| | || || ||||| || || || Sbjct 31260073 CATCCAGAAGGAGTCCACTCTCCATTTGGTTTTGAG 31260038 Score = 122 bits (134), Expect = 1e-22 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| |||||| |||| || ||||||||||| |||||||| || || || || ||| Sbjct 31306453 AATGCAGATATTTGTTAAGACTTTGACTGGAAAGACTATTACTTTGGAGGTTGAGAGTTC 31306394 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| |||| || |||||| ||| || ||||| || || || || ||||| || || Sbjct 31306393 AGATACTATTGATAATGTGAAAGCTAAGATTCAAGACAAGGAGGGTATCCCTCCCGATCA 31306334 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||| | || | ||||||||||| | ||||| | || | ||||| || Sbjct 31306333 ACAAAGGCTTATCTTCGCCGGTAAGCAATTGGAAGACGGGCGCACACTTGGCGATTACAA 31306274 Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || ||| ||| | || |||||||| ||| | ||||| ||||| || Sbjct 31306273 CAT-TCAAAAGGAGTCCACCCTTCATTTGGTGCTTAGATTGAGAGGTGG 31306226 Score = 113 bits (124), Expect = 7e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || | || |||||||||||||| || || || || ||| Sbjct 31287531 ATGCAAATTTTTGTAAAGACCCTTACCGGAAAAACTATTACTTTGGAGGTTGAGAGTTCA 31287472 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || |||||| ||| || |||||||| || || || ||||| || || Sbjct 31287471 GATACTATTGATAATGTGAAAGCTAAGATTCAAGATAAGGAGGGTATCCCTCCCGATCAG 31287412 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| ||||||||||| |||||| || || | | |||||||| Sbjct 31287411 CAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACCCTTGCTGATTATAAC 31287352 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAG 156037 || || ||| || |||| || ||||| || || || Sbjct 31287351 AT-TCAAAAGGAATCGACCCTCCATTTGGTTTTGAG 31287317 Score = 107 bits (118), Expect = 3e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | || ||| | ||||| || |||||||| || || || ||| ||| Sbjct 31259796 ATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTGGAGGTGGAAAGCTCT 31259737 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || |||||| || ||||||||||| || || || || ||||| || Sbjct 31259736 GATACTATTGATAATGTGAAAGCAAAGATACAAGATAAGGAGGGTATTCCCCCAGATCAG 31259677 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | |||| ||| || |||||| | || ||| | ||| | ||||||| ||| Sbjct 31259676 CAGAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTCTGGCAGATTACAAT 31259617 Query 156003 AT 156004 || Sbjct 31259616 AT 31259615 Score = 107 bits (118), Expect = 3e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | || |||||||| |||||||| || || | || || ||| ||| Sbjct 31288215 ATGCAGATATTTGTGAAGACATTGACCGGAAAAACAATCACCCTTGAGGTTGAATCATCT 31288156 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || ||||| ||||| || || ||||| || || Sbjct 31288155 GATACAATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGTATCCCTCCTGATCAG 31288096 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| || || |||||||| ||| ||||| || | |||||||| Sbjct 31288095 CAGAGGCTTATCTTTGCAGGGAAACAGCTCGAGGATGGAAGAACCCTAGCTGATTATAAC 31288036 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || || | || |||||| | ||| | ||||||||||| || Sbjct 31288035 ATCCAGAAGGAATCTACCCTTCATCTGGTGCTTAGATTAAGAGGTGG 31287989 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| ||||| | || || |||||||||||||| || || ||||| || ||| || Sbjct 31260481 AATGCAGATATTCGTAAAGACTTTGACTGGAAAAACCATCACCTTAGAGGTTGAATCCTC 31260422 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| || || || || ||||| || ||||| || || ||||| || || Sbjct 31260421 GGATACCATTGATAATGTCAAGGCCAAGATACAGGACAAAGAGGGTATCCCTCCTGATCA 31260362 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || | || | ||| || || || || |||||| || || || | |||||||| Sbjct 31260361 GCAGAGGCTTATCTTTGCAGGGAAACAACTAGAAGATGGAAGGACCCTAGCTGATTATAA 31260302 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || || | || |||||||| ||| | ||||| |||||||| Sbjct 31260301 CATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGCGG 31260254 Score = 105 bits (116), Expect = 1e-17 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || | || |||||||||||||| || || || || ||| Sbjct 31287759 ATGCAAATTTTTGTAAAGACCCTTACCGGAAAAACTATTACTTTGGAGGTTGAGAGTTCA 31287700 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || |||||| ||| || || ||||| |||||||| ||||| || || Sbjct 31287699 GATACTATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAAGGCATCCCTCCTGATCAG 31287640 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | || | ||| || || || || |||||| || || | | ||||||| Sbjct 31287639 CAGAGACTTATCTTTGCAGGGAAACAACTTGAAGATGGAAGGACCCTTGCTGATTATA-- 31287582 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034 ||||||||| || | || || ||||| || || Sbjct 31287581 ATATCCAAAAGGAATCCACTCTGCATTTGGTTTT 31287548 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | || || | || || || |||||||| || || || ||| ||| Sbjct 31287075 ATGCAAATATTTGTGAAGACTCTTACCGGGAAGACTATTACCTTGGAGGTGGAAAGCTCT 31287016 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||||||||| || ||||| ||||| || || || || ||||| || Sbjct 31287015 GATACGATTGATAACGTGAAAGCGAAGATACAGGATAAGGAGGGTATTCCACCAGACCAG 31286956 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| | |||| ||| || |||||| | || ||| | ||||| ||||||| ||| Sbjct 31286955 CAAAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTACAAT 31286896 Query 156003 AT 156004 || Sbjct 31286895 AT 31286894 Score = 104 bits (114), Expect = 3e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | || || ||||||||||| |||||||| || || || || ||| Sbjct 31287988 AATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACTATTACTTTGGAGGTGGAGAGTTC 31287929 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| |||| || |||||| ||| || |||||||| || || || |||||||| || Sbjct 31287928 AGATACTATTGATAATGTGAAAGCTAAGATTCAAGATAAGGAGGGTATCCCTCCAGATCA 31287869 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 || || | || | ||||||||||| | ||||| | || | | ||||| || Sbjct 31287868 GCAGAGGCTTATCTTCGCCGGTAAGCAATTGGAAGACGGGCGCACGCTCGCTGATTACAA 31287809 Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTT 156034 || || ||| ||| | || |||||||| || || Sbjct 31287808 CAT-TCAAAAGGAGTCCACCCTTCATTTGGTTTT 31287776 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||||||||| |||||||| || || | || || || ||| Sbjct 31306680 ATGCAGATCTTTGTGAAAACATTGACAGGAAAAACCATCACTCTTGAGGTAGAGAGTTCC 31306621 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || ||||| ||||| || || ||||| || || Sbjct 31306620 GATACAATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAGGGTATCCCTCCTGATCAG 31306561 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| ||||| |||||||| ||| |||| || | |||||||| Sbjct 31306560 CAGAGGCTTATCTTTGCAGGTAAACAGCTCGAGGATGGAAGAATCCTAGCTGATTATAAC 31306501 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || || | || |||||||| ||| | ||||| ||||| || Sbjct 31306500 ATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGG 31306454 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || | ||||||||||| ||||| || || || || || Sbjct 36294783 ATGCAGATTTTTGTTAAGACCCTAACTGGAAAAACGATTACTTTGGAGGTTGAGAGCTCA 36294842 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || ||| || | || || || ||||| |||||||| || Sbjct 36294843 GACACAATTGACAATGTAAAGGCTAAGATTCTGGACAAGGAGGGCATTCCTCCAGACCAG 36294902 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| ||||||| ||| || |||||||| |||||| || || || ||||||||||| Sbjct 36294903 CAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACCTTGTCAGATTATAAC 36294962 Query 156003 AT 156004 || Sbjct 36294963 AT 36294964 Score = 102 bits (112), Expect = 1e-16 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | |||||||||||||| |||||||| || | || || || |||| Sbjct 31288443 ATGCAAATCTTTGTGAAAACATTGACTGGCAAAACTATCACCCTCGAGGTGGAGAGTTCT 31288384 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||||| ||| ||| || ||||| || ||||| || ||||| || || Sbjct 31288383 GATACCATAGACAACGTTAAAGCTAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAG 31288324 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| | || | ||| ||||| || | |||||| | | || | | ||||| | Sbjct 31288323 CAAAGGCTTATATTTGCTGGTAAACAATTGGAAGATGGCCGCACCCTTGCGGATTACA-- 31288266 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 | ||||||| || | || ||||| | ||| | |||| ||||| || Sbjct 31288265 ACATCCAAAAGGAATCCACCCTTCACCTTGTGCTGCGATTGAGAGGTGG 31288217 Score = 100 bits (110), Expect = 4e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || ||||| || || || || || || ||| |||| Sbjct 31287303 ATGCAGATTTTTGTGAAGACTCTTACCGGAAAGACAATAACTTTGGAGGTTGAAAGTTCT 31287244 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||||||||| || || || || ||||| ||||| |||||||| || Sbjct 31287243 GATACAATTGACAACGTGAAAGCAAAGATTCAGGACAAAGAGGGCATTCCTCCAGACCAG 31287184 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | |||| || || |||||| | |||||| | | ||| | | ||||||||| Sbjct 31287183 CAGAGGCTAATTTTCGCGGGCAAGCAGTTGGAAGATGGCCGTACTCTGGCTGATTATAAT 31287124 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037 || ||||| | || || ||||| || || || Sbjct 31287123 ATCCAGAAAGAATCTACTCTGCATTTGGTTTTGAG 31287089 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || | |||||||| || || || || || || || |||| Sbjct 31260024 ATGCAGATTTTTGTTAAGACCCTTACTGGAAAGACCATAACTTTGGAGGTTGAGAGTTCT 31259965 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || ||||| ||||| || |||||||| ||||| ||||| || || Sbjct 31259964 GATACAATTGATAATGTGAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCTGACCAG 31259905 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||| | |||| ||| || |||||| | || ||| | ||||| | ||||||||| Sbjct 31259904 CAGAGACTAATTTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTATAAT 31259845 Query 156003 AT 156004 || Sbjct 31259844 AT 31259843 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | |||||||||||||| ||||| || || | || || ||| || Sbjct 31260708 ATGCAAATCTTCGTGAAAACATTGACTGGTAAAACCATCACCCTTGAGGTGGAATCATCA 31260649 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || ||||| ||||| || || ||||| || || Sbjct 31260648 GATACAATTGATAATGTCAAGGCCAAGATTCAAGACAAAGAGGGAATCCCTCCTGATCAG 31260589 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| || || || ||||| ||| ||||| || | |||||||| Sbjct 31260588 CAGAGGCTTATCTTTGCTGGGAAACAACTCGAGGATGGAAGAACCCTAGCTGATTATAAC 31260529 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || || | || |||||||| ||| | ||||| ||||| || Sbjct 31260528 ATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGG 31260482 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | || || | |||||||| || || || | || || || ||| Sbjct 35111141 ATGCAAATATTTGTGAAGACTCTCACTGGAAAGACAATCACCCTTGAGGTGGAGAGCTCT 35111082 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || |||||||| ||||| || || || ||||| || Sbjct 35111081 GATACCATTGACAATGTTAAGGCCAAGATACAAGACAAAGAGGGTATCCCACCAGACCAG 35111022 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| || || ||||| |||||| |||||| || | |||||||| Sbjct 35111021 CAGAGGCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCAGAACATTGGCCGATTATAAC 35110962 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034 || |||||| | || |||||| | || || Sbjct 35110961 ATCCAGAAAGAGTCAACTCTTCATCTCGTTTT 35110930 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | ||||| || || ||||| || || || || || Sbjct 36294555 ATGCAGATTTTTGTGAAGACTCTTACTGGCAAGACAATTACTTTGGAGGTAGAGAGCTCG 36294614 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| || |||||||| || || || || || ||||| || Sbjct 36294615 GACACAATTGACAATGTGAAGGCCAAGATACAAGACAAGGAGGGTATTCCCCCAGACCAG 36294674 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| ||||||| ||| || ||||| || ||||| ||||| | | ||||||||| Sbjct 36294675 CAAAGGTTGATTTTTGCTGGAAAGCAACTTGAAGACGGTCGAACTCTGGCTGATTATAAT 36294734 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034 || |||||| |||| |||||| | || || Sbjct 36294735 ATCCAGAAAGAGTCGACTCTTCATCTTGTCTT 36294766 >seq8 Length=45569985 Score = 116 bits (128), Expect = 5e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || | ||||||||||| ||||| || || || || || Sbjct 6168397 ATGCAGATTTTTGTTAAGACCCTAACTGGAAAAACGATTACTTTGGAGGTGGAGAGCTCA 6168456 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || ||| || || || || |||||||| || ||||| || Sbjct 6168457 GACACAATTGACAATGTAAAGGCTAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCAG 6168516 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| ||||||| ||| || |||||||| |||||| |||||| || |||||||||| Sbjct 6168517 CAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCAGAACCTTGGCAGATTATAAC 6168576 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || ||||| | || |||||| Sbjct 6168577 ATCCAGAAAGAATCCACTCTTCAT 6168600 Score = 100 bits (110), Expect = 4e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || | ||||| ||||| ||||| || || || || || Sbjct 35000138 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAAACAATTACTTTGGAGGTAGAGAGCTCA 35000079 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| || ||||| |||||| || || || || ||||| || ||||| || Sbjct 35000078 GACACTATTGACAATGTGAAGGCTAAAATTCAGGACAAGGAGGGCATTCCCCCAGACCAG 35000019 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| ||||||||| ||| || ||||||||||||||| | | ||| | | ||||| || Sbjct 35000018 CAACGATTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCCGGACTCTTGCTGATTACAAC 34999959 Query 156003 ATATCCAAAGAGGCGACGCTTCA 156025 || |||||| | || ||||| Sbjct 34999958 ATTCAGAAAGAGTCTACCCTTCA 34999936 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || ||||| || ||||| || || || || || Sbjct 35000366 ATGCAGATTTTTGTGAAGACCCTTACAGGAAAGACAATTACTTTGGAGGTAGAGAGCTCG 35000307 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| ||| ||||| || ||||| || || || ||||| || Sbjct 35000306 GACACAATTGACAATGTGAAGGCTAAGATACAGGACAAAGAGGGTATCCCCCCAGACCAG 35000247 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | |||| ||| || ||||||||||||||| ||||||| | | ||||| || Sbjct 35000246 CAGAGGCTCATTTTTGCTGGAAAGCAGCTCGAAGATGGCAGAACTCTTGCTGATTACAAC 35000187 Query 156003 ATATCCAAAGAGGCGACGCTTCA 156025 || |||||| | || ||||| Sbjct 35000186 ATCCAGAAAGAGTCAACTCTTCA 35000164 Score = 89.7 bits (98), Expect = 8e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | || || | |||||||| || ||||| | || || || ||| Sbjct 6167941 ATGCAAATATTTGTGAAGACTCTCACTGGAAAGACGATTACCCTTGAGGTGGAGAGCTCT 6168000 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || |||||||| ||||| || || || ||||| || Sbjct 6168001 GATACCATTGACAATGTTAAGGCCAAGATACAAGACAAAGAGGGTATCCCACCAGACCAG 6168060 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| || || ||||| |||||| |||||| || | ||||| || Sbjct 6168061 CAGAGGCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCAGAACCTTGGCTGATTACAAC 6168120 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034 || || ||| | || || ||| | ||||| Sbjct 6168121 ATCCAGAAGGAGTCAACTCTCCATCTTGTGTT 6168152 Score = 89.7 bits (98), Expect = 8e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | || || | || ||||| || ||||| | || || || ||| Sbjct 35000594 ATGCAAATATTTGTGAAGACTCTCACAGGAAAGACAATTACCCTTGAGGTGGAGAGCTCT 35000535 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || || |||||||| ||||| || || || ||||| || Sbjct 35000534 GACACCATTGACAATGTCAAGGCCAAGATACAAGACAAAGAGGGTATCCCACCAGATCAG 35000475 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| || || ||||| |||||| |||||| || | |||||||| Sbjct 35000474 CAGAGGCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCAGAACCTTGGCTGATTATAAC 35000415 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034 || |||||| | || || ||| | ||||| Sbjct 35000414 ATTCAGAAAGAGTCAACTCTCCATCTTGTGTT 35000383 >seq1 Length=52991155 Score = 116 bits (128), Expect = 5e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | ||||| | || || ||||| || || | ||||| ||| |||| Sbjct 28610592 ATGCAAATCTTTGTCAAAACCCTAACAGGGAAAACCATAACCCTGGAAGTTGAATCTTCT 28610651 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || |||||||| || || ||||| || |||||||| || || || || Sbjct 28610652 GACACAATCGACAACGTGAAGGCGAAGATTCAAGACAAGGAAGGCATTCCACCGGATCAG 28610711 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| ||||||| | ||| || |||||| | |||||| |||||| | | ||||||||| Sbjct 28610712 CAACGATTGATCTTTGCAGGGAAGCAGTTGGAAGATGGAAGAACTCTTGCGGATTATAAT 28610771 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || |||||| ||||||||| |||| Sbjct 28610772 ATCCAGAAAGAGAGTACGCTTCATCTAGT 28610800 Score = 107 bits (118), Expect = 3e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | || || ||||| || || || ||||| |||| || || |||| Sbjct 28610820 ATGCAGATATTTGTGAAGACGTTGACCGGGAAGACAATTACTCTAGAGGTGGAGAGTTCT 28610879 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| |||||||| || || || ||||| || ||||| || || || || Sbjct 28610880 GATACTATTGATAACGTGAAGGCCAAGATTCAGGATAAGGAGGGCATTCCACCGGATCAG 28610939 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||||||| | ||| || || || || || ||| || ||| | | ||||||||| Sbjct 28610940 CAGCGATTGATCTTTGCTGGAAAACAACTTGAGGATGGGAGGACTCTCGCTGATTATAAT 28610999 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || |||||| | ||||||||| Sbjct 28611000 ATTCAGAAAGAGTCTACGCTTCAT 28611023 >seq6 Length=35275713 Score = 95.1 bits (104), Expect = 2e-14 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || |||||||| ||||| || || || || || Sbjct 24039540 ATGCAGATTTTTGTGAAGACCCTCACCGGAAAAACAATTACTTTGGAGGTAGAGAGCTCA 24039599 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || ||||| || ||||| || || || || || || ||||| || Sbjct 24039600 GATACTATTGACAATGTGAAGGCCAAGATACAGGACAAGGAGGGTATCCC-CCAGACCAG 24039658 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||| ||||||| || || |||||||| |||||| ||| || || | ||||||||| Sbjct 24039659 CAAAGGTTGATTTTCGCTGGAAAGCAGCTTGAAGATGGCAGGACATTGGCTGATTATAAT 24039718 Query 156003 AT 156004 || Sbjct 24039719 AT 24039720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731851992449200