Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq979 149 4e-31 seq8 114 8e-21 seq4 107 1e-18 seq7 102 5e-17 seq6 87.8 1e-12 >seq979 Length=3763 Score = 149 bits (164), Expect = 4e-31 Identities = 385/568 (68%), Gaps = 24/568 (4%) Strand=Plus/Plus Query 5689 AGCTTCCTCGACTCGACGCTCTGATTTAGCAGACGCCT-GACGGAAAAATCGGTCGTGTA 5747 |||||| ||| ||||||| ||| ||||| ||||| || || ||||||||||| Sbjct 833 AGCTTCTTCGGATCGACGCCCTGCGCAAGCAG-CGCCTTGATCGAGTTGTCGGTCGTGTA 891 Query 5748 CGTTTCGCCTGGGTTCCACGATGGAGCGAACAGAGGTGTCTGGTGTCCCAGATCCGTCAA 5807 | | | | || ||||||| || ||| ||| | |||||||| ||||| ||||||| Sbjct 892 CTTGGTGTCCGGTTTCCACGCGGGCGCGTGCAGCGCCGTCTGGTGACCCAGCTCCGTCAG 951 Query 5808 CGACCAGGCACCCTTGTAATCGTACGTCATGACAAATATGTGATCAAGGTATTTTTGTGC 5867 | ||||| | ||| |||||||||||| | || |||| || | ||| || ||| Sbjct 952 GCTGAACGCACCGTAGTAGTCGTACGTCATGTCGAAGATGTAGTCCATGTA-CTTCGTG- 1009 Query 5868 GGTGGC--GTAGTCGACGACGTCGATCTTGTCGTGTCCCGCGCCGACGGCGCTCGTCAAC 5925 | | | ||||| || |||||||||||||| | |||||||||| || ||||| | Sbjct 1010 GCTTCCTTGTAGTTCACCACGTCGATCTTGTCCTTGCCCGCGCCGATCGCCGACGTCAGC 1069 Query 5926 T-GTAGCCGTCTACCCCGCTTCTCGCCCA-ACTC-ATCAAGCATCACGCGAAGTTCCCGC 5982 | |||| |||| || | || |||| | || | || |||||| || |||||| | Sbjct 1070 TCGTAG--GTCTTGCCGGTGTC-CGCCGACACGCGGTCGAGCATCTGCCGCAGTTCCTTC 1126 Query 5983 AGCAAAAGAGT---GTAGGTGTTGCGATCCACCTCGGCATTACCCAACACAGAATTGGCA 6039 | | || || || || ||| || | ||| || | | | || || Sbjct 1127 ATC---AGCGTCACATACAGCGCGCCGTCCGTCTGCGGATTGCCGATCGCGCCGTTCGCG 1183 Query 6040 CCCTTTCCACCCGGAAACTCCCAGTCGATGTCCACTCCGTCAAAGAACTTCCAGGTCTCC 6099 ||||| || ||||| || |||||||||||||| || ||||| |||||||||||||| | Sbjct 1184 CCCTTGCCGCCCGGGAATTCCCAGTCGATGTCGACACCGTCGAAGAACTTCCAGGTGCGC 1243 Query 6100 AGAAACT-CGCGGACGCTTGTGACGAACACCTCACGCTTAGAGTCATCGTTCA--TGAAA 6156 || |||| | ||| || | ||||||||||| ||||| | |||| || || | Sbjct 1244 AGCAACTGCTCGGTCGAAT-CGACGAACACCTTGCGCTTGGCCGGGTCGTGCAGCTGGA- 1301 Query 6157 TAAAACGGATCGCTCAACGTCCACCCCCCTATGGATGGTAGGACCGTCAACGAGGGGTTG 6216 | ||||||||| || |||||| || || || || || |||| | | | ||| ||| Sbjct 1302 -AGAACGGATCGGACAGCGTCCAGCCGCCGATCGACGGCAGGATCTTGAGGTCGGGATTG 1360 Query 6217 TGACGTTTGATGGCCATCAGCTGGCCAA 6244 | || |||||||| |||||||| Sbjct 1361 CGCTTCTTCGCGGCCATCATCTGGCCAA 1388 >seq8 Length=45569985 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| ||| ||||||||| ||||| || || | ||| |||| | || Sbjct 33775183 AGGACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCGTCC 33775124 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||||| | |||||||| | || | || ||||| || Sbjct 33775123 TCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCAGGGGAATTCCTTCCTTATCC 33775064 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||||| | || | || | ||||| |||| ||| ||||| Sbjct 33775063 TGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCGACCTCAAGGGTGGTGGTC 33775004 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||||||||| || |||||||||||| Sbjct 33775003 TTGCCGGTGAGGGTCTTAACGAAGATCTGCATG 33774971 Score = 109 bits (120), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| |||||||| ||||| ||||| | || |||| | || Sbjct 36460070 AGGACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGTCCGTCT 36460011 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||||||||||| || ||||||||||| | || | || ||||| || Sbjct 36460010 TCCAACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTATCC 36459951 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || |||||| || | ||||| || | ||| || || | |||||| Sbjct 36459950 TGGATCTTGGCTTTGAC--AT--TGTCGATTGTGTCGGAAGACTCAACCTCGAGGGTTAT 36459895 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || ||||| || || ||||||||||| Sbjct 36459894 CGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 36459859 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| ||||| |||||||||||||| || || | |||| | | || || ||| Sbjct 33775408 ACAAGGTGAAGAGTGCTTTCCTTCTGAATGTTGTAATCAGCTAGGGTTCTTTCGTCTTCC 33775349 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||||||||||||||||| || | ||||||||| | | || |||||||| | Sbjct 33775348 AACTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCTATGTGAATTCCTTCCTTGTCCTGG 33775289 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || ||||| | || | ||| | | || |||| || ||||||||| Sbjct 33775288 ATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTTTACACCTCAAGGGGGATGGTCTTT 33775229 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || |||||||| | |||||||||||| Sbjct 33775228 CCGGTAAGGGTCTTGATAAAGATCTGCAT 33775200 Score = 105 bits (116), Expect = 4e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | ||||| ||||||| ||| ||| ||||||||||| || || | Sbjct 34999912 CCTCCCCTCAAACGAAGGACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGCA 34999971 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || || |||||||| || || |||| ||||||||||||| | || Sbjct 34999972 AGAGTCCGGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAATCGTTGCTGGTCTGGGGGA 35000031 Query 34871 ACCCCCTCCTTGTCGTTTATTTT 34893 | ||||||||||| | ||||| Sbjct 35000032 ATGCCCTCCTTGTCCTGAATTTT 35000054 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || |||||||| || | ||| | ||| |||| ||||| ||||| || || || Sbjct 6167903 TCCTTTTGGATGTTATAATCAGCAAGGGTACGCCCATCCTCCAGCTGCTTGCCAGCAAAA 6167844 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||||||| ||||||||| | || | || |||||||| | |||||| || || Sbjct 6167843 ATCAGTCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGAATTTTTGCCTTAACATTG 6167784 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | || ||| || || | || |||||||| || ||||||||||| || Sbjct 6167783 TCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACG 6167724 Query 34967 AAGATCTGCAT 34977 ||||| ||||| Sbjct 6167723 AAGATTTGCAT 6167713 Score = 102 bits (112), Expect = 5e-17 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | ||||| ||||||| |||| ||| ||||||||||| || || | Sbjct 6168851 CCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCC 6168792 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | || |||| || || ||||| || || ||||||| | ||||| || | || Sbjct 6168791 AAAGTCCGGCCATCTTCAAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCAGGTGGA 6168732 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | |||||||| || | ||||||| || || || ||||||| || | || Sbjct 6168731 ATTCCCTCCTTATCCTGTATTTTTGCCTTAAC--AT--TATCGATGGTGTCTGAGCTTTC 6168676 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || | || ||||||||||| || | ||||| ||||||||||||||| Sbjct 6168675 CACCTCCAATGTAATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCATG 6168624 Score = 96.9 bits (106), Expect = 2e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | ||||| ||||||| |||| ||| ||||||||||| || || | Sbjct 6169079 CCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCC 6169020 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | || |||| || || ||||| || || ||||||| | ||||| ||| | || Sbjct 6169019 AAAGTCCGGCCATCTTCAAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 6168960 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT--TCATTGGCC--TC 34926 | || |||||||| | |||||| || || || |||| || | || | || Sbjct 6168959 ATTCCTTCCTTGTCCTGGATTTTTGCCTTCAC--AT--TATCAATTGTGTCTGAACTTTC 6168904 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || | ||| |||||||| || || | ||||| ||||||||||||||| Sbjct 6168903 TACCTCTAAGGTGATGGTCTTACCGGTCAACGTCTTCACAAAGATCTGCATG 6168852 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || ||||||||||||||| ||||| | ||| | | |||| || Sbjct 34999702 ACAAGGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCT 34999761 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||||| || || ||||||| | ||||| ||| | || | ||||||||||| | | Sbjct 34999762 AACTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGT 34999821 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCC--TCGACATCAACGGTTATGGTCT 34946 |||||| || ||| | || | || || | || || || | ||| ||||||| Sbjct 34999822 ATTTTTGCCTTTACGTTATCAATTGTGTC--TGAACTTTCTACCTCTAGGGTAATGGTCT 34999879 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || | ||||| |||||||||||||| Sbjct 34999880 TTCCGGTCAATGTCTTCACAAAGATCTGCAT 34999910 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || ||||||||||||||| ||||| | ||| | | |||| ||| Sbjct 6169289 ACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCC 6169230 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || ||||||| | ||||| ||| | || | || |||||||| | Sbjct 6169229 AATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGG 6169170 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT--TCATTGGCC--TCGACATCAACGGTTATGGT 34944 |||||| || || || |||| || | || | || || || | ||| ||||| Sbjct 6169169 ATTTTTGCCTTCAC--AT--TATCAATTGTGTCTGAACTTTCTACCTCTAAGGTGATGGT 6169114 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || | |||||||||||||||||||| Sbjct 6169113 CTTACCGGTCAACGTCTTTACAAAGATCTGCAT 6169081 Score = 87.8 bits (96), Expect = 1e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||||| |||||||| ||||| ||||| | |||| | || | || Sbjct 33774955 AGGACAAGGTGAAGGGTGCTTTCCTTCTGGATGTTGTAGTCAGCTAGGGTACGACCGTCC 33774896 Query 34826 TCCAGTTGCTTTCCGGCGAAGAT 34848 || |||||||||||||||||||| Sbjct 33774895 TCGAGTTGCTTTCCGGCGAAGAT 33774873 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| |||||||||||||| || | | | | | |||| || || || ||||| || || Sbjct 35000403 CTCTTTCTGAATGTTATAATCAGCCAAGGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAA 35000462 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || | ||||| ||| | || | ||||| ||||| | ||| || ||||| Sbjct 35000463 GATGAGCCTCTGCTGATCTGGTGGGATACCCTCTTTGTCTTGTATCTTGGCCTTGACATT 35000522 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| | ||| || |||| ||| || |||||||| ||||| ||||| || Sbjct 35000523 GTCAATGGTGTCAGAGCTCTCCACCTCAAGGGTAATTGTCTTTCCTGTGAGAGTCTTCAC 35000582 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 35000583 AAATATTTGCAT 35000594 >seq4 Length=56582383 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||||||| |||||||| || | ||| | ||| |||| Sbjct 36294082 AGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCAAGGGTACGCCCATCC 36294023 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||| || || ||||| || |||||||| | || | || |||||||| Sbjct 36294022 TCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGGATTCCTTCCTTGTCT 36293963 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || || |||| | || ||| || || | || |||||| Sbjct 36293962 TGAATCTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTC 36293903 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||||||||| || ||||| ||||| Sbjct 36293902 TTTCCAGTGAGGGTCTTAACGAAGATTTGCAT 36293871 Score = 107 bits (118), Expect = 1e-18 Identities = 154/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || ||||||||||||||| ||||| | ||| | | |||| ||| Sbjct 36295447 ACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCC 36295388 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || ||||||| | ||||| ||| | || | ||||||||||| | Sbjct 36295387 AATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGG 36295328 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT--TCATTGGCC--TCGACATCAACGGTTATGGT 34944 |||||| ||||| || ||||||| | || | || || || | ||| ||||| Sbjct 36295327 ATTTTTGCCTTGAC--AT--TATCGATAGTGTCTGAACTTTCCACCTCTAAGGTGATGGT 36295272 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || | ||||| |||||||||||||| Sbjct 36295271 CTTTCCGGTCAATGTCTTCACAAAGATCTGCAT 36295239 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | ||||| ||||||| |||| ||| |||||||||||||| || | Sbjct 36295237 CCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCAGCC 36295178 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | || |||| || || ||||| || || ||||||| | ||||| ||| | || Sbjct 36295177 AAAGTCCGGCCATCTTCAAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 36295118 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | |||||||| || | |||||| || || || |||| || ||| | || Sbjct 36295117 ATTCCCTCCTTATCCTGTATTTTAGCCTTAAC--AT--TATCAATGGTGTCAGAGCTTTC 36295062 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || | || ||||||||||| || | ||||| ||||||||||||||| Sbjct 36295061 CACCTCCAATGTAATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCATG 36295010 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/234 (70%), Gaps = 14/234 (6%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGT---CC 34807 ||||||||||| | || || || |||| ||| ||||||||||||||||| | || Sbjct 35109319 CCTCCCCTCAAACGAAGAACAAGATGAAGGGTTGATTCCTTCTGAATGTTATAATCAGCC 35109378 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || |||| |||| || || |||||||| || || |||| | |||||||||| | Sbjct 35109379 AATGTCCTGC---CATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGG 35109435 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGC 34923 || | ||||||||||| | ||| || ||||| || |||| || || | Sbjct 35109436 GGGATACCCTCCTTGTCCTGTATCTTGGCCTTGAC--AT--TATCAATAGTGTCCGAGCT 35109491 Query 34924 CTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || | || || || || || ||||| ||||| ||||| |||||||| Sbjct 35109492 CTCTACCTCCAAAGTAATTGTTTTGCCTGTGAGTGTCTTAACAAAAATCTGCAT 35109545 Score = 95.1 bits (104), Expect = 8e-15 Identities = 162/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || ||||| || || |||| |||| |||| |||||| |||||||| || || Sbjct 31306224 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCGC 31306283 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 || ||||| | || |||| |||||| ||||||||||| || | ||| || || | | Sbjct 31306284 CAAGTGTGCGCCCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTTTGTTGATCGGGAG 31306343 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCC 34924 | | ||||||||||| | || || ||| || || |||| || || | Sbjct 31306344 GGATACCCTCCTTGTCTTGAATCTTAGCTTTCAC--AT--TATCAATAGTATCTGAACTC 31306399 Query 34925 TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | || || |||||||| || | ||||| ||||| |||||||| Sbjct 31306400 TCAACCTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTAACAAATATCTGCAT 31306452 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||||| || |||||||| || | ||| | ||| |||| Sbjct 35101817 AGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGCCCATCC 35101876 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || || || ||||| || ||||||||| | || | || |||||||| Sbjct 35101877 TCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCT 35101936 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | |||||| || || |||| | || ||| || || | || |||||| Sbjct 35101937 TGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTC 35101996 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||| ||||| Sbjct 35101997 TTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 35102028 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 34743 AATCAT--TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTT 34800 |||||| |||||||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct 27909664 AATCATGGTTCCTCCCCTGAGCCTCAGGACCAAGTGAAGAGTTGATTCCTTTTGTATGTT 27909605 Query 34801 ATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTG 34860 || || | || |||| |||| ||||||||||| || ||||| |||| | ||||| Sbjct 27909604 GTAATCAGCAAGAGTGCGACCATCTTCCAGTTGCTTACCAGCGAAAATCAACCTCTGCTG 27909545 Query 34861 GTCTTGCGGCACCCCCTCCTTGTC 34884 ||| | || | || |||||||| Sbjct 27909544 GTCAGGAGGGATGCCTTCCTTGTC 27909521 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || ||||||||||||||| ||||| | ||| | | |||| ||| Sbjct 35100489 ACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCC 35100548 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || ||||||| | ||||| ||| | || | || |||||||| | Sbjct 35100549 AATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGG 35100608 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT--TCATTGGCC--TCGACATCAACGGTTATGGT 34944 |||||| || || || |||| || | || | || || || | ||| ||||| Sbjct 35100609 ATTTTTGCCTTCAC--AT--TATCAATTGTGTCTGAACTTTCTACCTCTAAGGTGATGGT 35100664 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || | ||||| |||||||||||||| Sbjct 35100665 CTTACCGGTCAACGTCTTCACAAAGATCTGCAT 35100697 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || ||||||||||||||| ||||| | ||| | | |||| ||| Sbjct 35108881 ACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCC 35108940 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || ||||||| | ||||| ||| | || | || |||||||| | Sbjct 35108941 AATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGG 35109000 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT--TCATTGGCC--TCGACATCAACGGTTATGGT 34944 |||||| || || || |||| || | || | || || || | ||| ||||| Sbjct 35109001 ATTTTTGCCTTCAC--AT--TATCAATTGTGTCTGAACTTTCTACCTCTAAGGTGATGGT 35109056 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || | ||||| |||||||||||||| Sbjct 35109057 CTTACCGGTCAACGTCTTCACAAAGATCTGCAT 35109089 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | ||||| || |||| ||| |||||||| |||||||| || || Sbjct 36295009 CCTCCCCTCAGACGAAGGACAAGATGAAGGGTTGATTCCTTCTGGATGTTATAATCTGAC 36294950 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | | |||| || || |||||||| || || |||| | |||||||||| | || Sbjct 36294949 AAGGTCCTTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGA 36294890 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| || || || || | || | || | ||| || Sbjct 36294889 ATGCCCTCCTTGTCCAGAATCTTAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCAACC 36294830 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || || ||||| || |||||||| ||||| |||||||| Sbjct 36294829 TCCAAAGTAATCGTTTTTCCAGTTAGGGTCTTAACAAAAATCTGCAT 36294783 Score = 86.0 bits (94), Expect = 4e-12 Identities = 161/233 (69%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || ||||| || || |||| |||| ||| |||||||| |||||||| || | Sbjct 31306452 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCAG 31306511 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| | | |||| || || || || || || ||||| || | ||||| || | | Sbjct 31306512 CTAGGATTCTTCCATCCTCGAGCTGTTTACCTGCAAAGATAAGCCTCTGCTGATCAGGAG 31306571 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTC-ATTGGC---C 34924 | | ||||| ||||| | || || ||||| || |||| ||| || || | Sbjct 31306572 GGATACCCTCTTTGTCTTGGATCTTGGCCTTGAC--AT--TATCAATTGTATCGGAACTC 31306627 Query 34925 TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || |||| || ||||| ||||| || | || || |||||||||||||| Sbjct 31306628 TCTACCTCAAGAGTGATGGTTTTTCCTGTCAATGTTTTCACAAAGATCTGCAT 31306680 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||| ||||||| || ||| ||||| ||||| || || | || | | |||| Sbjct 35109561 CAAGACAAGGTGAAGAGTCGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATC 35109620 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || |||||||| || || || || | ||||||||| | || | ||||||||||| Sbjct 35109621 TTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 35109680 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || || | |||| || | ||| || || | || || || Sbjct 35109681 CTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTAATTGT 35109740 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || |||||||||||||| |||||||| Sbjct 35109741 CTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35109773 >seq7 Length=49172423 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || ||||||||||||||| ||||| | ||| | | |||| ||| Sbjct 47990286 ACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCC 47990227 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || ||||||| | ||||| ||| | || | ||||||||||| | | Sbjct 47990226 AATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGT 47990167 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| || || | |||| || | ||| || || | || || |||||| Sbjct 47990166 ATTTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCTACCTCCAAAGTAATTGTCTTT 47990107 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| |||||||| |||||||| Sbjct 47990106 CCTGTAAGGGTTTTTACAAAAATCTGCAT 47990078 >seq6 Length=35275713 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||| ||||||| || ||| || || ||||| || || | || | | |||| Sbjct 24039524 CAAGACAAGGTGAAGAGTTGACTCTTTTTGGATGTTGTAATCGGCAAGAGTTCTGCCATC 24039465 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || |||||||| || || || || | ||||||||| | || | ||||||||||| Sbjct 24039464 TTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTC 24039405 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || |||||| || |||| || ||| | ||| || |||| ||| | Sbjct 24039404 CTGAATCTTGGCTTTGAC--AT--TATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGA 24039349 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||||||| ||||| ||||| || ||||| ||||| Sbjct 24039348 TTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 24039312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325684118963753