Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 4e-11 >seq4 Length=56582383 Score = 84.2 bits (92), Expect = 4e-11 Identities = 105/146 (72%), Gaps = 11/146 (8%) Strand=Plus/Plus Query 81637 CAAACACAGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTA- 81695 |||| |||||| ||||||| || ||||||||||||| || || || | ||||| | Sbjct 31287553 CAAATGCAGAGTGGATTCCTTTTGGATATTATAATCAGCAAGGGTCCTTCCATCTTCAAG 31287612 Query 81696 ----------ACAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAAT 81745 ||||||| ||||| || ||| | ||| | || |||||||||| ||||| Sbjct 31287613 TTGTTTCCCTGCAAAGATAAGTCTCTGCTGATCAGGAGGGATGCCTTCCTTATCCTGAAT 31287672 Query 81746 CTTTGCTTTTATATTTTCAATCGTAT 81771 ||| ||||| | ||| ||||| |||| Sbjct 31287673 CTTAGCTTTCACATTATCAATAGTAT 31287698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903386502996320