Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7 107 1e-18 seq4 107 1e-18 seq6 105 4e-18 seq8 102 5e-17 seq5 100 2e-16 seq1 82.4 5e-11 >seq7 Length=49172423 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||| || || ||| ||| ||||| ||||||||||| | Sbjct 47989848 CCACCACGAAGACGGAGCACCAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAATCTGCA 47989789 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| |||| || || ||||||||||| | ||||||||| ||| | || Sbjct 47989788 AGGGTACGCCCGTCTTCCAGCTGCTTGCCGGCAAAAATTAGACGCTGCTGGTCTGGAGGG 47989729 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||| || | | ||||| ||| | || ||| ||||| Sbjct 47989728 ATCCCTTCCTTGTCTTGAATCTT-GGCCTTAACATTGTCAATTGTATCGGAGCTCTCCAC 47989670 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || ||||| | || || |||||||| ||||| Sbjct 47989669 CTCAAGGGTGATTGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 47989622 >seq4 Length=56582383 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| || | ||| | || || ||| || ||||| ||||||||||| | Sbjct 31288217 CCACCTCTCAATCGCAGCACAAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAATCCGCA 31288276 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || ||||||||||| || ||||| || | | |||||||| | || Sbjct 31288277 AGGGTGCGGCCATCTTCCAATTGTTTACCAGCAAATATAAGCCTTTGCTGATCGGGAGGA 31288336 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| ||| || | || ||| | ||| | ||| || ||||| Sbjct 31288337 ATACCTTCCTTGTCTTGAATCTT-AGCTTTAACGTTGTCTATGGTATCAGAACTCTCCAC 31288395 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| ||||| || || || ||||| |||||||| ||||| Sbjct 31288396 CTCGAGGGTGATAGTTTTGCCAGTCAATGTTTTCACAAAGATTTGCAT 31288443 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||||||| || ||| ||| ||||| ||||| ||||| | Sbjct 35111142 ACCACCACGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGC 35111201 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || || |||| || || || |||||||||| ||||||||| ||| | || Sbjct 35111202 AAGGGTACGCCTATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGG 35111261 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||| || | | ||||| ||| | || ||| |||| Sbjct 35111262 GATCCCTTCTTTGTCTTGAATCTT-GGCCTTAACATTGTCAATTGTATCGGAGCTCTCCA 35111320 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| || || ||||| | || || |||||||| ||||| Sbjct 35111321 CCTCAAGGGTGATTGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 35111369 Score = 102 bits (112), Expect = 5e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || || |||||||| || ||| ||| ||||| ||||||||||| | Sbjct 31287760 ACCACCACGAAGCCGCAAAACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGC 31287819 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| |||||||| || ||||| || || | | |||||||||| | || Sbjct 31287820 GAGCGTGCGCCCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGAGG 31287879 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TT 33697 | ||| || || || ||| || |||| |||| || | || || ||| | Sbjct 31287880 GATACCCTCCTTATCTTGAATCTTAGCTTTC-ACATTATCAATAGTATC---TGAACTCT 31287935 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || | || || || || || || || || |||||||| |||||||| Sbjct 31287936 CCACCTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 31287987 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| | | ||||||||| || || || || || ||||| ||||| | Sbjct 31260482 CCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCAGCT 31260541 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || || | |||||| || ||||| || | | ||||||||| | || Sbjct 31260542 AGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCAAAGATAAGCCTCTGCTGATCAGGAGGG 31260601 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||| || | | |||| || | || || ||||||||| Sbjct 31260602 ATTCCCTCTTTGTCTTGAATCTT-GGCCTTGACATTATCAATTGTATCTGATGATTCCAC 31260660 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| |||||||| || || ||||| || ||||| ||||| Sbjct 31260661 CTCAAGGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATTTGCAT 31260708 Score = 96.9 bits (106), Expect = 2e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| || || | || ||||| ||| || || |||||||| || | Sbjct 35100471 CCACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCA 35100530 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || |||||||| || || ||||| ||||| | |||||||||| | || Sbjct 35100531 AGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 35100590 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGA---TTC 33698 | ||||| ||||| ||||| |||| ||| ||| ||||| ||| ||| Sbjct 35100591 ATTCCTTCCTTGTCCTGGATTTTTGCCTTCA-CATTATCAATTGTGTC---TGAACTTTC 35100646 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| || ||||| || ||||| || ||||||||||||||| Sbjct 35100647 TACCTCTAAGGTGATGGTCTTACCGGTCAACGTCTTCACAAAGATCTGCATA 35100698 Score = 96.9 bits (106), Expect = 2e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| || || | || ||||| ||| || || |||||||| || | Sbjct 35108863 CCACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCA 35108922 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || |||||||| || || ||||| ||||| | |||||||||| | || Sbjct 35108923 AGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 35108982 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGA---TTC 33698 | ||||| ||||| ||||| |||| ||| ||| ||||| ||| ||| Sbjct 35108983 ATTCCTTCCTTGTCCTGGATTTTTGCCTTCA-CATTATCAATTGTGTC---TGAACTTTC 35109038 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| || ||||| || ||||| || ||||||||||||||| Sbjct 35109039 TACCTCTAAGGTGATGGTCTTACCGGTCAACGTCTTCACAAAGATCTGCATA 35109090 Score = 95.1 bits (104), Expect = 8e-15 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| | | ||||||||| || ||| ||| ||||| |||||||||||| Sbjct 31306226 CCACCTCTCAATCTAAGCACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCGCCA 31306285 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| |||| |||||||| || ||||| || || | | || ||||| | || Sbjct 31306286 AGTGTGCGCCCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTTTGTTGATCGGGAGGG 31306345 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTC 33698 | ||| || ||||| ||| || |||| |||| || | || || ||| || Sbjct 31306346 ATACCCTCCTTGTCTTGAATCTTAGCTTTC-ACATTATCAATAGTATC---TGAACTCTC 31306401 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || || || || || || || ||||| |||||||| Sbjct 31306402 AACCTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTAACAAATATCTGCAT 31306452 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| || || | || ||||| ||| || || |||||||| || | Sbjct 36295465 CCACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCA 36295406 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || |||||||| || || ||||| ||||| | |||||||||| | || Sbjct 36295405 AGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGGG 36295346 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTC 33698 | || || ||||| ||||| || | |||| || | ||||| ||| ||| Sbjct 36295345 ATTCCCTCCTTGTCCTGGATTTT-TGCCTTGACATTATCGATAGTGTC---TGAACTTTC 36295290 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || | ||||| || || || || || || || ||||||||||||||| Sbjct 36295289 CACCTCTAAGGTGATGGTCTTTCCGGTCAATGTCTTCACAAAGATCTGCATA 36295238 >seq6 Length=35275713 Score = 105 bits (116), Expect = 4e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | |||||| || | || ||||| |||||| || |||||||| || | Sbjct 24039993 CCACCACGAAGACGTAAAACAAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAGTCAGCA 24039934 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || |||||||| || || ||||| ||||| | ||| |||||| | || Sbjct 24039933 AGGGTTCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGTTGATCTGGTGGG 24039874 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGA---TTC 33698 | ||||| ||||| ||||| || | ||||| ||| |||||| ||| ||| Sbjct 24039873 ATTCCTTCCTTGTCCTGGATTTT-TGCCTTAACATTATCAATGGTGTC---TGAACTTTC 24039818 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || | || || || || ||||| || || || ||||||||||||||| Sbjct 24039817 CACCTCCAATGTAATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCATA 24039766 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||||||||| || ||| ||| ||||| ||||||||||| | Sbjct 24039310 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCA 24039251 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||| || || || |||||||||| ||||||||| || | || Sbjct 24039250 AGGGTACGCCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGG 24039191 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTC 33698 | ||||| ||||| |||||| || | ||||| ||| | ||| || ||| || Sbjct 24039190 ATTCCTTCCTTGTCTTGAATTTT-TGCCTTAACATTGTCTATGGTATC---TGAACTCTC 24039135 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || || || || | || || || || || ||||| Sbjct 24039134 AACTTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACGAATATTTGCAT 24039084 >seq8 Length=45569985 Score = 102 bits (112), Expect = 5e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| || || | || ||||| ||| || || |||||||| || | Sbjct 6169307 CCACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCA 6169248 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || |||||||| || || ||||| ||||| | |||||||||| | || Sbjct 6169247 AGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 6169188 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGA---TTC 33698 | ||||| ||||| ||||| |||| ||| ||| ||||| ||| ||| Sbjct 6169187 ATTCCTTCCTTGTCCTGGATTTTTGCCTTCA-CATTATCAATTGTGTC---TGAACTTTC 6169132 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| || ||||| || ||||| |||||||||||||||||| Sbjct 6169131 TACCTCTAAGGTGATGGTCTTACCGGTCAACGTCTTTACAAAGATCTGCATA 6169080 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||||| || | || |||||| || || || |||||||| |||| | Sbjct 36460085 CCACCACGAAGACGTAGGACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCG 36460026 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||||| |||| ||||| || |||||||| || || | ||| ||||| || | || Sbjct 36460025 AGAGTGCGTCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGA 36459966 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || || || ||| | ||| ||| | |||||| || || || Sbjct 36459965 ATTCCTTCCTTATCCTGGATCTTGGCTTTGA-CATTGTCGATTGTGTCGGAAGACTCAAC 36459907 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || ||||| || ||||||| ||||| || ||||||||||| Sbjct 36459906 CTCGAGGGTTATCGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 36459859 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || |||| ||| | || | || || ||| |||||| || ||||||||||| | Sbjct 6169080 ACCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGC 6169021 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || || | || || || ||||| ||||| | |||||||||| | || Sbjct 6169020 CAAAGTCCGGCCATCTTCAAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGG 6168961 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TT 33697 | ||||| ||||| ||||| || | |||| || | ||||| ||| || Sbjct 6168960 GATTCCTTCCTTGTCCTGGATTTT-TGCCTTCACATTATCAATTGTGTC---TGAACTTT 6168905 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||||| || ||||| || ||||| || |||||||||||||| Sbjct 6168904 CTACCTCTAAGGTGATGGTCTTACCGGTCAACGTCTTCACAAAGATCTGCAT 6168853 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||||||| || || ||| ||||| ||||| ||||| | Sbjct 35000595 ACCACCACGGAGACGGAGCACCAAATGAAGGGTAGACTCCTTTTGGATGTTATAATCCGC 35000654 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || |||| |||||| || |||||||| | |||||||||||| | || Sbjct 35000655 AAGGGTACGCCCATCCTCCAGTTGTTTGCCAGCAAAAATGAGACGCTGCTGATCAGGTGG 35000714 Query 33642 CACACCTTCTTTGTC 33656 | ||||| ||||| Sbjct 35000715 GATCCCTTCCTTGTC 35000729 Score = 82.4 bits (90), Expect = 5e-11 Identities = 152/219 (69%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 33536 GTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGT 33595 ||||||| | || |||||||| || || || ||||||||||| | || || | ||||| Sbjct 33775413 GTAACACAAGGTGAAGAGTGCTTTCCTTCTGAATGTTGTAATCAGCTAGGGTTCTTTCGT 33775354 Query 33596 CGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGT 33655 | ||||| || |||||||| || || | | |||||| ||| | | ||||| |||| Sbjct 33775353 CTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCTATGTGAATTCCTTCCTTGT 33775294 Query 33656 CGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTG 33711 | || || | | |||| ||| | |||||| ||| || ||| |||| | | Sbjct 33775293 CCTGGATCTT-GGCCTTGACATTGTCAATGGTGTCAGAGCT---TTACACCTCAAGGGGG 33775238 Query 33712 ATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || || || | || || | ||||||||||||| Sbjct 33775237 ATGGTCTTTCCGGTAAGGGTCTTGATAAAGATCTGCATA 33775199 >seq5 Length=43630510 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| || || || |||||||| |||| ||| ||||| |||| |||| ||| Sbjct 14677244 TGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCCAGCTGT 14677185 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | ||| || || || | || | ||||||||||| || || Sbjct 14677184 TTTCCGGCGAAGATGAGACGTTGTTGGTCCGGTGGGATTCCTTCTTTGTCTTGGATCTTG 14677125 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| |||| ||| | |||||| ||||| || || | || || || || || || Sbjct 14677124 GCTTTC-ACATTGTCGATGGTGTCTGAAGATTCAACTTCGAGGGTTATTGTCTTCCCGGT 14677066 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || ||||| || ||||||||||| Sbjct 14677065 TAGGGTTTTCACGAAGATCTGCAT 14677042 >seq1 Length=52991155 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| |||||| || || |||||||| | || || | |||| || | ||| Sbjct 28610566 TGAAGCGTGGACTCTTTCTGGATATTGTAATCCGCAAGAGTTCTACCGTCTTCTAGCTGT 28610507 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 |||||||| || || | ||| || || || | || | ||||||||||| ||||| Sbjct 28610506 TTTCCGGCGAAGATGAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTGTCTTGGATTTT- 28610448 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | || || | ||| | |||||| |||||| || || | || || ||||| || || Sbjct 28610447 GGCTTTGACGTTGTCGATTGTGTCGGATGATTCTACCTCTAGGGTTATTGTTTTGCCGGT 28610388 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || ||||| || || |||||||| Sbjct 28610387 CAAGGTTTTCACGAAAATCTGCAT 28610364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328695238703040