Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq2187 533 4e-147 seq7 533 4e-147 seq4 533 4e-147 seq10 513 4e-141 seq1 511 1e-140 seq3 199 1e-46 seq2 114 4e-21 >seq2187 Length=124033 Score = 533 bits (590), Expect = 4e-147 Identities = 699/961 (73%), Gaps = 8/961 (1%) Strand=Plus/Plus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 122566 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 122624 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || ||||| || || || ||||| || |||||||| || || || Sbjct 122625 TTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATTCGTGA 122684 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 ||||| ||||| ||| || || |||||||| || || || || ||| | | || | Sbjct 122685 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 122744 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || || ||||| | ||||| ||||| || ||||||||| || |||||||| Sbjct 122745 TTCGGCG--GCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAA 122802 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | |||||||| || || | |||| | || | |||||| | |||| || | Sbjct 122803 TGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 122862 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || |||||||||||||| | ||| || || ||| | || |||||| | Sbjct 122863 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCT 122922 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || |||| |||||| | |||||||| | ||| Sbjct 122923 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGT 122982 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| || | |||||| | || || || || || ||||||| ||| | Sbjct 122983 CAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCCGGTACTTTCAACTTTATGATT 123042 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || || || || || ||||| ||||| ||||| || || |||||| | || || ||||| Sbjct 123043 GTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGT 123102 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || ||||| || || ||||||||||| ||||||||||| | || || || | | ||| Sbjct 123103 GTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTAACTTC-TAGTTTGAT 123161 Query 29257 C-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | | || || || ||| | ||| || | ||||||| || || ||||| ||||| Sbjct 123162 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGA 123221 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 || ||||| || ||||| ||||| ||||| ||||| || |||||||||||||||||| Sbjct 123222 AACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 123281 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||| ||| |||||| |||| |||||||| ||||| ||||| || ||||| || || Sbjct 123282 TTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 123341 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 ||| | || || || | || ||||| || || | || ||||| ||||||||||| Sbjct 123342 GTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAACTTTAACCA 123401 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | |||||||| ||||| || ||||||||| || | || || || Sbjct 123402 ATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGTGC 123461 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||||| || | ||||| |||||||| |||||||||||||||||||| || || || || Sbjct 123462 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 123521 Query 29616 T 29616 | Sbjct 123522 T 123522 >seq7 Length=49172423 Score = 533 bits (590), Expect = 4e-147 Identities = 699/961 (73%), Gaps = 8/961 (1%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 6942851 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 6942793 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || ||||| || || || ||||| || |||||||| || || || Sbjct 6942792 TTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6942733 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 ||||| ||||| ||| || || |||||||| || || || || ||| | | || | Sbjct 6942732 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 6942673 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || | | ||||| | ||||| ||||| || ||||||||| || |||||||| Sbjct 6942672 TTCGGCGA--CTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAA 6942615 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | |||||||| || || | |||| | || | |||||| | |||| || | Sbjct 6942614 TGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 6942555 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || |||||||||||||| | ||| || || ||| | || |||||| | Sbjct 6942554 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCT 6942495 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || |||| |||||| | |||||||| | ||| Sbjct 6942494 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGT 6942435 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| || | |||||| | || || || || || ||||||| ||| | Sbjct 6942434 CAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCCGGTACTTTCAACTTTATGATT 6942375 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || || || || || ||||| ||||| ||||| || || |||||| | || || ||||| Sbjct 6942374 GTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGT 6942315 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || ||||| || || ||||||||||| ||||||||||| | || || || | | ||| Sbjct 6942314 GTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTAACTTC-TAGTTTGAT 6942256 Query 29257 C-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | | || || || ||| | ||| || | ||||||| || || ||||| ||||| Sbjct 6942255 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGA 6942196 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 || ||||| || ||||| ||||| ||||| ||||| || |||||||||||||||||| Sbjct 6942195 AACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 6942136 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||| ||| |||||| |||| |||||||| ||||| ||||| || ||||| || || Sbjct 6942135 TTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 6942076 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 ||| | || || || | || ||||| || || | || ||||| ||||||||||| Sbjct 6942075 GTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAACTTTAACCA 6942016 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | |||||||| ||||| || ||||||||| || | || || || Sbjct 6942015 ATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGTGC 6941956 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||||| || | ||||| |||||||| |||||||||||||||||||| || || || || Sbjct 6941955 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 6941896 Query 29616 T 29616 | Sbjct 6941895 T 6941895 Score = 268 bits (296), Expect = 3e-67 Identities = 464/669 (69%), Gaps = 8/669 (1%) Strand=Plus/Minus Query 28936 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 28995 |||||| | |||| || | || ||| || || ||||||||||| | | ||| || Sbjct 5597326 CACTTCTTACTTGGTGTAGCTTGTTCCATCGGTCGTGAGTGGGAACT--GTTTTCGTCTG 5597269 Query 28996 GGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTT 29055 || ||| | || |||||| | | ||||| |||| ||| || ||||| || ||| ||| Sbjct 5597268 GGTATGCGCCCTTGGATTGTTATTGCATATTCAGTTCCTGTTGCAGCTGCTAGTGCAGTT 5597209 Query 29056 TTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCA 29115 ||| | |||||||| | |||||||| ||| || | |||||| | || || | Sbjct 5597208 TTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTAT 5597149 Query 29116 GGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 29175 || || ||||||| | | | || || || | || ||||| ||||| ||||| | || Sbjct 5597148 GGTACTTTCAACTTTACGATTGTATTTCAGGTTGAGCATAATATTCTTATGCATTCATTT 5597089 Query 29176 CACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCG 29235 |||||| | || || ||||| || || | || || ||||||||| ||||| ||| Sbjct 5597088 CACATGTTAGGTGTAGCTGGTGTATTTGACGGTTCCCTATTTAGTAATATGCATTCTTC- 5597030 Query 29236 CTTGTCACGTCCTCGCTTGTGCGTGAGACGACTGAAGACATCTCTCAGAACTATGGTTAC 29295 ||||| | | || | | || || | || | ||| || | |||||| Sbjct 5597029 CTTGTTAACTTCTAA-TAATCAAGGAAACCATAAAAAATGAATCTGCTAATGAAGGTTAC 5596971 Query 29296 AAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGT 29355 | || || ||||| ||||| || ||||| || |||| ||| | ||||| ||||| | Sbjct 5596970 AGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGTTGCTTATGGTTATTTTGGCTGA 5596911 Query 29356 TTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCC 29415 |||||||||||||||||| |||||| ||| |||||| |||| |||||||| ||||| Sbjct 5596910 TTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCT 5596851 Query 29416 TGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACA--ATGGCGTTTAATC 29473 ||||| | ||||| || | ||| | || | || | || ||| || || || ||| Sbjct 5596850 TGGCCTATAGTAGGTATCTAGTTTACCGCGTAAGG--TATCAACACTATAGCTTTCAATT 5596793 Query 29474 TGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTT 29533 | || ||||| || ||| |||| || | | || | | ||| |||| ||||| || | Sbjct 5596792 TAAATGGTTTCAATTTTTACCAATCAGTAGTTGATAGTCAAGGTTGTGTAATTAACACCT 5596733 Query 29534 GGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTC 29593 |||||||| || | | || | |||||| || | ||||| |||||||| |||||||||| Sbjct 5596732 GGGCTGATATTGTTGACCGTGTTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 5596673 Query 29594 ATAACTTCC 29602 ||||||||| Sbjct 5596672 ATAACTTCC 5596664 >seq4 Length=56582383 Score = 533 bits (590), Expect = 4e-147 Identities = 699/961 (73%), Gaps = 8/961 (1%) Strand=Plus/Plus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 18304235 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 18304293 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || ||||| || || || ||||| || |||||||| || || || Sbjct 18304294 TTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATTCGTGA 18304353 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 ||||| ||||| ||| || || |||||||| || || || || ||| | | || | Sbjct 18304354 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 18304413 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || || ||||| | ||||| ||||| || ||||||||| || |||||||| Sbjct 18304414 TTCGGCG--GCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAA 18304471 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | |||||||| || || | |||| | || | |||||| | |||| || | Sbjct 18304472 TGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 18304531 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || |||||||||||||| | ||| || || ||| | || |||||| | Sbjct 18304532 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCT 18304591 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || |||| |||||| | |||||||| | ||| Sbjct 18304592 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGT 18304651 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| || | |||||| | || || || || || ||||||| ||| | Sbjct 18304652 CAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCCGGTACTTTCAACTTTATGATT 18304711 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || || || || || ||||| ||||| ||||| || || |||||| | || || ||||| Sbjct 18304712 GTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGT 18304771 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || ||||| || || ||||||||||| ||||||||||| | || || || | | ||| Sbjct 18304772 GTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTAACTTC-TAGTTTGAT 18304830 Query 29257 C-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | | || || || ||| | ||| || | ||||||| || || ||||| ||||| Sbjct 18304831 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGA 18304890 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 || ||||| || ||||| ||||| ||||| ||||| || |||||||||||||||||| Sbjct 18304891 AACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 18304950 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||| ||| |||||| |||| |||||||| ||||| ||||| || ||||| || || Sbjct 18304951 TTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 18305010 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 ||| | || || || | || ||||| || || | || ||||| ||||||||||| Sbjct 18305011 GTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAACTTTAACCA 18305070 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | |||||||| ||||| || ||||||||| || | || || || Sbjct 18305071 ATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGTGC 18305130 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||||| || | ||||| |||||||| |||||||||||||||||||| || || || || Sbjct 18305131 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 18305190 Query 29616 T 29616 | Sbjct 18305191 T 18305191 Score = 114 bits (126), Expect = 4e-21 Identities = 180/253 (71%), Gaps = 6/253 (2%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 18031084 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 18031026 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 || | || ||||| || ||||| || || || ||||| || |||||||| || || || Sbjct 18031025 TTCCGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATTCGTGA 18030966 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 ||||| ||||| ||| || || |||||||| || || || || ||| | | || | Sbjct 18030965 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 18030906 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || || ||||| | ||||| |||||||| ||||||||| || |||||||| Sbjct 18030905 TTCTGCG--GCTATCGGTTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGATGAA 18030848 Query 28897 TGGCTCTACAACG 28909 ||| | ||||||| Sbjct 18030847 TGGTTATACAACG 18030835 Score = 86.0 bits (94), Expect = 2e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 29515 GGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTA 29574 |||||| | |||| | ||||||||| || | ||||| |||||||| || | |||| Sbjct 37891826 GGTCGTTTATTTAACATCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGTAAGTT 37891885 Query 29575 ATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 |||||||| |||||||||||||||||| | || || || ||| Sbjct 37891886 ATGCATGAACGTAATGCTCATAACTTCTCTCTAGACCTTGCT 37891927 >seq10 Length=496089 Score = 513 bits (568), Expect = 4e-141 Identities = 703/975 (72%), Gaps = 8/975 (1%) Strand=Plus/Minus Query 28639 AACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATT 28698 |||||| | ||| || | || |||||||| | || ||||| || ||||||| Sbjct 201340 AACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATC 201281 Query 28699 CCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGT 28757 || | || ||| || | |||| || ||||| || ||||| || || || ||||| Sbjct 201280 CC-TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGT 201222 Query 28758 TGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCAT 28817 || |||||||| || ||||| ||||| |||| | | || ||||||||||| || || Sbjct 201221 AGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTAT 201162 Query 28818 ATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 28875 || || || | | || | | || || |||||| | ||||| |||||||||||| Sbjct 201161 CTCTGGTGCTATTATTCCTACTTCTGCG--GCGATCGGATTGCACTTTTACCCAATTTGG 201104 Query 28876 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 28935 |||||| || ||||||| ||| | ||||| || || || | | || | || | Sbjct 201103 GAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 201044 Query 28936 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 28995 |||||| | |||| || | ||| ||||| || |||||||||||||| | || || Sbjct 201043 CACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 200984 Query 28996 GGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTT 29055 || ||| | || |||||| ||| ||||| |||||||| || ||||| || |||| ||| Sbjct 200983 GGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTT 200924 Query 29056 TTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCA 29115 ||| | | ||||| | |||||||| ||| || | |||||||| || || || Sbjct 200923 TTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAATCTCT 200864 Query 29116 GGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTC 29175 || || ||||||| ||| | || ||||| || || || ||||| || ||||| || ||| Sbjct 200863 GGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTC 200804 Query 29176 CACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCG 29235 |||||| | || || ||||| || ||||| || || ||||| ||||| ||||| ||||| Sbjct 200803 CACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCC 200744 Query 29236 CTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTA 29294 | || || || | | ||| | | || || |||||| | ||| || | ||||| Sbjct 200743 TTGGTAACCTC-TAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTA 200685 Query 29295 CAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACG 29354 ||| ||||| ||||| |||||||||||||| || || || ||||| ||||| ||||| || Sbjct 200684 CAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCG 200625 Query 29355 TTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGC 29414 || ||||||||||||||| |||||| || |||||| ||||||||||| | ||||| Sbjct 200624 ATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGC 200565 Query 29415 CTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCT 29474 ||||| || ||||| || |||||| |||| || || || ||| ||||| || || || Sbjct 200564 TTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACCT 200505 Query 29475 GAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTG 29534 || ||||| || || ||||| || | | || | | |||||||| ||||| || || Sbjct 200504 AAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTG 200445 Query 29535 GGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCA 29594 ||||||| || | || || |||||||| || | ||||||||||| || ||||||||||| Sbjct 200444 GGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGCTCA 200385 Query 29595 TAACTTCCCACTTGA 29609 |||||||| || || Sbjct 200384 CAACTTCCCTCTAGA 200370 >seq1 Length=52991155 Score = 511 bits (566), Expect = 1e-140 Identities = 692/957 (72%), Gaps = 8/957 (1%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 38651342 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 38651284 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || ||||| || || || ||||| || |||||||| || || || Sbjct 38651283 TTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATTCGTGA 38651224 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 ||||| ||||| ||| || | |||||||| || || || || ||| | | || | Sbjct 38651223 GCCTGTTTCTGGATCTCTACTTTCCGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 38651164 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || || ||||| | ||||| ||||| || ||||||||| || |||||||| Sbjct 38651163 TTCTGCG--GCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAA 38651106 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | |||||||| || || | |||| | || | |||||| | |||| || | Sbjct 38651105 TGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 38651046 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || |||||||||||||| | ||| || || ||| | || |||||| | Sbjct 38651045 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGTT 38650986 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || |||| |||||| | |||||||| | ||| Sbjct 38650985 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGT 38650926 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| || | |||||| | || || || || || ||||||| ||| | Sbjct 38650925 CAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATT 38650866 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || || || || || ||||| ||||| ||||| || || |||||| | || || ||||| Sbjct 38650865 GTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGT 38650806 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-T 29255 || ||||| || || ||||||||||| ||||||||||| |||| | | || | ||| | Sbjct 38650805 GTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTC-CTTGGTAACTTCTAGTTTGAT 38650747 Query 29256 GCGTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | || || || ||| | ||| || | ||||||| || || ||||| ||||| Sbjct 38650746 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGA 38650687 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 || ||||| || ||||| ||||| ||||| ||||| || || ||||||||||||||| Sbjct 38650686 AACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 38650627 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||| ||| |||||| |||| |||||||| ||||| ||||| || ||||| || || Sbjct 38650626 TTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTG 38650567 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 || | || || || | || ||||| || || | || ||||| ||||||||||| Sbjct 38650566 ATTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAACTTTAACCA 38650507 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | |||||||| ||||| || ||||||||| || | || || || Sbjct 38650506 ATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGTGC 38650447 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCT 29612 |||||| || | ||||| |||||||| ||||||||||||||||| || || || || Sbjct 38650446 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTTCCTCTAGACCT 38650390 Score = 118 bits (130), Expect = 3e-22 Identities = 183/257 (71%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 25175168 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 25175110 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || ||||| || || || ||||| || |||||||| || || || Sbjct 25175109 TTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATTCGTGA 25175050 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 ||||| ||||| ||| || || |||||||| || || || || ||| | | || | Sbjct 25175049 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 25174990 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || | | ||||| | ||||| ||||| || ||||||||| || |||||||| Sbjct 25174989 TTCGGCGA--CTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAA 25174932 Query 28897 TGGCTCTACAACGGGGG 28913 ||| | |||||||| || Sbjct 25174931 TGGTTATACAACGGCGG 25174915 >seq3 Length=55515152 Score = 199 bits (220), Expect = 1e-46 Identities = 208/273 (76%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 29344 TACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTC 29403 || ||||| || |||||||||||||||||| |||||| ||| |||||| |||| ||| Sbjct 40133064 TATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTTTCGTTCTTTACATTTC 40133123 Query 29404 TTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATG 29463 ||||| ||||| ||||| || ||||| || ||||| | || || || | || ||| Sbjct 40133124 TTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATG 40133183 Query 29464 GCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTC 29523 || || || | || ||||| ||||||||||| || | | || | | |||||||| Sbjct 40133184 GCTTTCAACTTAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTA 40133243 Query 29524 ATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAG 29583 ||||| || ||||||||| || | ||||| |||||||| || | |||| |||||||| Sbjct 40133244 ATTAACACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGAAAGTTATGCATGAA 40133303 Query 29584 CGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 |||||||||||||||||||| || || || ||| Sbjct 40133304 CGTAATGCTCATAACTTCCCTCTAGACCTAGCT 40133336 >seq2 Length=45729672 Score = 114 bits (126), Expect = 4e-21 Identities = 180/253 (71%), Gaps = 6/253 (2%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||| | ||||||| || | || ||| || | Sbjct 37873719 AACCGTCTTTACATTGGATGGTTTTGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 37873661 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || ||||| || || || ||||| || |||||||| || || || Sbjct 37873660 TTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATTCGTGA 37873601 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 ||||| ||||| ||| || || |||||||| || || || || ||| | | || | Sbjct 37873600 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 37873541 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || || ||||| | ||||| |||||||| ||||||||| || |||||||| Sbjct 37873540 TTCTGCG--GCTATCGGTTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTTGATGAA 37873483 Query 28897 TGGCTCTACAACG 28909 ||| | ||||||| Sbjct 37873482 TGGTTATACAACG 37873470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146661791002702