Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=52991155 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 108556 CAAGCGAACAAGCAATGTAATCCTTCGTCGCGACTTATGAGCTCGTTACTGAACGTCAAA 108615 |||||||| || || |||||||||||||| || |||||||| ||| || || Sbjct 19457521 CAAGCGAAATCACAGTGCAATCCTTCGTCGCGTGAAATAAGCTCGTTTGAGAAGGTTAAT 19457462 Query 108616 CCCGGCATAATACCTTTCGTTTTAATGTAAAATATTGCCGCAAAACTGCCGGaaaaaaaT 108675 |||||||| | ||| | |||| | | || || || || || ||||| ||||| Sbjct 19457461 CCCGGCATTAAACCGCGCTTTTTCAACCAGAAAATCGCACAGAAGCTTCCGGAGAAAAAG 19457402 Query 108676 ATTCCCTCGACAATTGCAAACGCAACCATTCTTTGTGCCAA 108716 ||||| || ||| ||||||||||| ||||||| ||| || Sbjct 19457401 ATTCCTTCAACACAAGCAAACGCAACGATTCTTTCTGCAAA 19457361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424923073771944