Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq1013 122 3e-23 >seq1013 Length=3469 Score = 122 bits (134), Expect = 3e-23 Identities = 225/329 (68%), Gaps = 11/329 (3%) Strand=Plus/Minus Query 7282 GTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCC 7341 || |||||||| || || || || || |||| | || |||||| || | |||| Sbjct 324 GTGAACAAAGTGATCCTCGTCGGCAATCTCGGCGCAGATCCGGAAGTGCGACATCTGCCG 265 Query 7342 AACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAA-GCA 7400 | |||| | ||||| | ||||| ||||| || | ||| ||| |||||||| ||| Sbjct 264 AGCGGCGACGCGGTCGCGAACATTCGTCTCGCGACGACCGATCGCTACAAGGACAAAGCA 205 Query 7401 GACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTGGC 7460 | ||| | | || | |||||| || || || | ||||| || ||||| || Sbjct 204 T-CAGGCGACTTCAAAGAGATCACCGAGTGGCATCGTGTCGCCTTCTTTGGCCGCCTTGC 146 Query 7461 GGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTGCG 7520 |||||||| | || |||| ||| ||||| || |||||| |||||||| || | || Sbjct 145 GGAGATCGTCAGCCAGTATCTGAAAAAGGGATCTTCCGTCTACATCGAAGGCCGCATCCG 86 Query 7521 CACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCGTCGA 7580 ||| || || ||||||| || ||||||||||| || ||| | |||||| | ||| || Sbjct 85 CACGCGGAAATGGCAGGGGCAAGACGGCCAGGATCGCTACTCGACCGAGATTGTCGCTGA 26 Query 7581 CATGCACGGACAGATGCAGATGCTTGGCG 7609 | || ||||||||||| |||| Sbjct 25 C---------CAAATGCAGATGCTCGGCG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194814140423614