Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_031097.1 Length=52077 Score E Sequences producing significant alignments: (Bits) Value seq1130 111 5e-20 >seq1130 Length=2756 Score = 111 bits (122), Expect = 5e-20 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 45894 GATTGGGTGATCGTCGGCGGCGAGTCTGGCCACGGCGCACGGCCGATGCATCCCGACTGG 45953 ||||||||||| ||||||||| || || | ||| || |||||||||||||| ||| Sbjct 2471 GATTGGGTGATTTGCGGCGGCGAAAGCGGGCATGCCGCGCGCCCGATGCATCCCGATTGG 2530 Query 45954 GCGCGATCCCTGCGTGACCAGTGCGTCGCGGCTGGGGTGCCGTTCATGTTCAAGCAGTGG 46013 | || | ||||| || |||||| ||||| || || ||||| |||||||||| ||| Sbjct 2531 GTTCGCGCGCTGCGCGATCAGTGCACGGCGGCAGGCGTCCCGTTTTTGTTCAAGCAATGG 2590 Query 46014 GGCGAGTGGGCGCCGCGGGGGCCGGA 46039 ||||| ||| ||||| |||||||| Sbjct 2591 GGCGAATGGTGCCCGCGCGGGCCGGA 2616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166520475246866