Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_031281.1 Length=43516 Score E Sequences producing significant alignments: (Bits) Value seq1130 109 2e-19 >seq1130 Length=2756 Score = 109 bits (120), Expect = 2e-19 Identities = 112/144 (78%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 37854 ATTGGGTGATCGTCGGCGGCGAGAGCGGGCCCGGCGCTCGGCCGATGCACCCGGCCTGGG 37913 |||||||||| ||||||||| ||||||| | ||| || |||||||| || | |||| Sbjct 2472 ATTGGGTGATTTGCGGCGGCGAAAGCGGGCATGCCGCGCGCCCGATGCATCCCGATTGGG 2531 Query 37914 CGCGCTCACTCCGCGACCAATGCACGGCGGCCGATGTGCCGTTCCTGTTCAAGCAGTGGG 37973 ||| | || ||||| || ||||||||||| | || ||||| |||||||||| |||| Sbjct 2532 TTCGCGCGCTGCGCGATCAGTGCACGGCGGCAGGCGTCCCGTTTTTGTTCAAGCAATGGG 2591 Query 37974 GTGAATGGGGCACCGC-CGCGCCG 37996 | |||||| || |||| || |||| Sbjct 2592 GCGAATGGTGC-CCGCGCGGGCCG 2614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139125986717332