Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq8 109 5e-19 seq1 102 8e-17 seq4 98.7 9e-16 seq7 96.9 3e-15 seq6 93.3 4e-14 >seq8 Length=45569985 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | || ||||| || || ||||||||| ||||| || || | Sbjct 33775198 CCACCACGTAGACGGAGGACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCA 33775139 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||||||||| |||||||| |||| | ||| |||||| |||| Sbjct 33775138 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCAGGGGA 33775079 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| ||| || | || |||| ||| | | | |||||| || || Sbjct 33775078 ATTCCTTCCTTATCC-TGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCGAC 33775020 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || | || || || || || ||||| ||||| ||||||||| Sbjct 33775019 CTCAAGGGTGGTGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATG 33774971 Score = 109 bits (120), Expect = 5e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||| ||||||||||| || || | || || || | || ||||||||||| || || || Sbjct 34999947 CTCTTTCTGAATGTTGTAATCAGCAAGAGTCCGGCCATCTTCGAGCTGCTTTCCAGCAAA 35000006 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| || || ||||| | ||||| || |||||||||| ||| |||| || | || Sbjct 35000007 AATCAATCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATTTTAGCCTTCACAT 35000065 Query 41791 CGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCT 41846 | | | |||||| ||| ||| ||||||| || || ||||| || || || |||| Sbjct 35000066 TGTCAATAGTGTCTGAGCT---CTCTACCTCCAAAGTAATTGTTTTGCCAGTAAGAGTCT 35000122 Query 41847 TTACGAAAATCTGCAT 41862 | |||||||||||||| Sbjct 35000123 TCACGAAAATCTGCAT 35000138 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||| || ||| ||||| || |||||||| || | Sbjct 6167939 CCACCACGGAGACGGAGCACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCA 6167880 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| ||| | || || ||||||||||| || || ||||| ||||| ||||| | || Sbjct 6167879 AGGGTACGCCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGG 6167820 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||| | ||| ||||||| | ||| | | | || || ||| || Sbjct 6167819 ATTCCTTCCTTGT-CTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAAC 6167761 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || || || ||||| ||||| || ||||| Sbjct 6167760 TTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 6167713 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || ||| || ||||| |||||||| || | | ||| | | || || Sbjct 6168605 ACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCTGCCAAGGTTCTGCCATCTTCA 6168546 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| || || || |||| | || ||||| | ||||| || ||||||||| || Sbjct 6168545 AGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCC-TG 6168487 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCCACCTCCACCGTTATCGTT 41830 | | || || | || | || | ||| || || ||||||||||| || |||||| Sbjct 6168486 AATCTTAGCCTTTACATTGTCA-ATTGTGTCT-GAGCTCTCCACCTCCAAAGTAATCGTT 6168429 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| || ||||||||||| Sbjct 6168428 TTTCCAGTTAGGGTCTTAACAAAAATCTGCAT 6168397 Score = 86.0 bits (94), Expect = 6e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 41649 GTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGT 41708 ||||||| || || || ||||| |||||||||||||| || || | ||||| | |||| Sbjct 33775413 GTAACACAAGGTGAAGAGTGCTTTCCTTCTGAATGTTGTAATCAGCTAGGGTTCTTTCGT 33775354 Query 41709 CGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGT 41768 | || | |||||| |||||||| || || | ||| ||||| | ||| | ||||||| Sbjct 33775353 CTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCTATGTGAATTCCTTCCTTGT 33775294 Query 41769 CCATGATTTT 41778 || ||| || Sbjct 33775293 CCTGGATCTT 33775284 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || || || || || ||||||||||||||| ||||| | Sbjct 6169307 CCACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCA 6169248 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || | ||||| || || || |||| | ||| || || | || Sbjct 6169247 AGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 6169188 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGAC--TCCA 41813 | | ||||||||| ||||||| ||||| | | | ||| || || || | Sbjct 6169187 ATTCCTTCCTTGTCCTGGATTTTTGCCTTCA--CATTATCAATTGTGTCTGAACTTTCTA 6169130 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || ||||| |||| ||||||||| || |||||||| Sbjct 6169129 CCTCTAAGGTGATGGTCTTACCGGTCAACGTCTTTACAAAGATCTGCAT 6169081 >seq1 Length=52991155 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || |||||| ||| ||||| || || || || | Sbjct 28610591 GCCACCACGGAGACGGAGAACAAGGTGAAGCGTGGACTCTTTCTGGATATTGTAATCCGC 28610532 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || | |||| || ||||| || |||||||| || || || |||||||| | || Sbjct 28610531 AAGAGTTCTACCGTCTTCTAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCAGGTGG 28610472 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | || ||||| |||||| |||| ||| | | | |||||| || || | Sbjct 28610471 AATTCCTTCTTTGTCTTGGATTTTG-GCTTTGACGTTGTCGATTGTGTCGGATGATTCTA 28610413 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | ||||| ||||| || |||| || || ||||||||||||||| Sbjct 28610412 CCTCTAGGGTTATTGTTTTGCCGGTCAAGGTTTTCACGAAAATCTGCATG 28610363 >seq4 Length=56582383 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || || |||| ||| || ||| |||||| |||||||| || || | | Sbjct 31287761 CCACCACGAAGCCGCAAAACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCG 31287820 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| |||| || | ||||| |||||||| || || | ||| || || | || Sbjct 31287821 AGCGTGCGCCCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGAGGG 31287880 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814 | | |||||| || ||| | || |||| || || ||| || |||||| Sbjct 31287881 ATACCCTCCTTATCT-TGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCCAC 31287939 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || |||| |||||||| ||||||||||| Sbjct 31287940 CTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 31287987 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| |||||| || || ||||| || ||||| || | || || || | || Sbjct 31287092 AAAACCAAATGCAGAGTAGATTCTTTCTGGATATTATAATCAGCCAGAGTACGGCCATCT 31287151 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | ||||||||| ||||| || || | ||| ||||| | |||| || ||| |||||| Sbjct 31287152 TCCAACTGCTTGCCCGCGAAAATTAGCCTCTGCTGGTCTGGAGGAATGCCCTCTTTGTCC 31287211 Query 41771 ATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACT--CCACCTCCACCGTTATCG 41828 ||| | ||||||| ||| | || | ||| | ||| | ||||||| ||||| | Sbjct 31287212 -TGAATCTTTGCTTTCACGTTGTCA-ATTGTATCAGAACTTTCAACCTCCAAAGTTATTG 31287269 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || || ||||| || ||||||||||| Sbjct 31287270 TCTTTCCGGTAAGAGTCTTCACAAAAATCTGCAT 31287303 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| || || || || || || ||| ||||| ||||| || || | Sbjct 35109547 CCACCGCGAAGACGCAAGACAAGGTGAAGAGTCGACTCTTTCTGGATGTTGTAATCAGCA 35109606 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || |||||||| || || || || || | ||| ||||| | |||| Sbjct 35109607 AGAGTTCTGCCATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGA 35109666 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGA---CTC 41811 | || |||||||||| ||| | || || | || | || ||||| ||| ||| Sbjct 35109667 ATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACATTGTCAATCGTGTC---CGAGCTCTC 35109722 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || |||||||| ||||||||||| Sbjct 35109723 AACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35109773 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||| || ||| |||||| || |||||||| || | Sbjct 35111143 CCACCACGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCA 35111202 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 ||||| ||| || || ||||||||||| || || ||||| ||||| ||||| | ||| Sbjct 35111203 AGGGTACGCCTATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGGG 35111262 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || || |||| | ||| | || || | ||| | | | || ||| ||||| Sbjct 35111263 ATCCCT-TCTTTGT-CTTGAATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCCA 35111320 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| || || || ||||| Sbjct 35111321 CCTCAAGGGTGATTGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 35111369 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || || |||||||| |||||||| || || | ||| | Sbjct 36295000 AGACGAAGGACAAGATGAAGGGTTGATTCCTTCTGGATGTTATAATCTGACAAGGTCCTT 36294941 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || || || |||| | || ||||| | |||| || |||| Sbjct 36294940 CCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGAATGCCCTCC 36294881 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCCACCTCCACC 41821 ||||||| || | || || | || | || | ||| || || ||| ||||||| Sbjct 36294880 TTGTCCA-GAATCTTAGCCTTTACATTGTCA-ATTGTGTCT-GAGCTCTCAACCTCCAAA 36294824 Query 41822 GTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||||||| || || || ||||| || ||||||||||| Sbjct 36294823 GTAATCGTTTTTCCAGTTAGGGTCTTAACAAAAATCTGCAT 36294783 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || || || || || ||| ||||| ||||| || || | Sbjct 35109775 CCACCACGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCA 35109834 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || ||||| || || || || || || | ||| ||||| | |||| Sbjct 35109835 AGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGA 35109894 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGA---CTC 41811 | || |||||||||| ||| | || || | || | || ||||| ||| ||| Sbjct 35109895 ATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACATTGTCAATCGTGTC---CGAGCTCTC 35109950 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || |||||||| ||||||||||| Sbjct 35109951 AACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35110001 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || || || || || ||| ||||| ||||| || || | Sbjct 35110003 CCACCACGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCA 35110062 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || ||||| || || || || || || | ||| ||||| | |||| Sbjct 35110063 AGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGA 35110122 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGA---CTC 41811 | || |||||||||| ||| | || || | || | || ||||| ||| ||| Sbjct 35110123 ATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACATTGTCAATCGTGTC---CGAGCTCTC 35110178 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || |||||||| ||||||||||| Sbjct 35110179 AACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35110229 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || || || || || ||| ||||| ||||| || || | Sbjct 35110231 CCACCACGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCA 35110290 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || ||||| || || || || || || | ||| ||||| | |||| Sbjct 35110291 AGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGA 35110350 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGA---CTC 41811 | || |||||||||| ||| | || || | || | || ||||| ||| ||| Sbjct 35110351 ATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACATTGTCAATCGTGTC---CGAGCTCTC 35110406 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || |||||||| ||||||||||| Sbjct 35110407 AACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35110457 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || || || || || ||| ||||| ||||| || || | Sbjct 35110459 CCACCACGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCA 35110518 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || ||||| || || || || || || | ||| ||||| | |||| Sbjct 35110519 AGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGA 35110578 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGA---CTC 41811 | || |||||||||| ||| | || || | || | || ||||| ||| ||| Sbjct 35110579 ATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACATTGTCAATCGTGTC---CGAGCTCTC 35110634 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || |||||||| ||||||||||| Sbjct 35110635 AACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35110685 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || || || || || ||| ||||| ||||| || || | Sbjct 35110687 CCACCACGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCA 35110746 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || ||||| || || || || || || | ||| ||||| | |||| Sbjct 35110747 AGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGA 35110806 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGA---CTC 41811 | || |||||||||| ||| | || || | || | || ||||| ||| ||| Sbjct 35110807 ATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACATTGTCAATCGTGTC---CGAGCTCTC 35110862 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || |||||||| ||||||||||| Sbjct 35110863 TACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35110913 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || || || || || ||||||||||||||| ||||| | Sbjct 36295465 CCACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCA 36295406 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || | ||||| || || || |||| | ||| || || | ||| Sbjct 36295405 AGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGGG 36295346 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC--TC 41811 | | |||||||||| ||||||| ||| || || | ||||| || || || Sbjct 36295345 ATTCCCTCCTTGTCCTGGATTTTTGCCTTGACATTATCG--ATAGTGT--CTGAACTTTC 36295290 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| | || || || || || |||| ||||| || || |||||||| Sbjct 36295289 CACCTCTAAGGTGATGGTCTTTCCGGTCAATGTCTTCACAAAGATCTGCAT 36295239 >seq7 Length=49172423 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| |||||| || ||||| || || | Sbjct 47989848 CCACCACGAAGACGGAGCACCAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAATCTGCA 47989789 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 ||||| ||| |||| || |||||||||||||| || || || ||||| ||||| | ||| Sbjct 47989788 AGGGTACGCCCGTCTTCCAGCTGCTTGCCGGCAAAAATTAGACGCTGCTGGTCTGGAGGG 47989729 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || ||||||| | ||| | || || | ||| | | | || ||| ||||| Sbjct 47989728 ATCCCT-TCCTTGT-CTTGAATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCCA 47989671 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| || || || ||||| Sbjct 47989670 CCTCAAGGGTGATTGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 47989622 >seq6 Length=35275713 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||| || ||| |||||| || ||||| || || | Sbjct 24039310 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCA 24039251 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| ||| | || || ||||||||||| || || ||||| ||||| ||||| | || Sbjct 24039250 AGGGTACGCCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGG 24039191 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||| | ||| ||||||| | ||| | | | || || ||| || Sbjct 24039190 ATTCCTTCCTTGT-CTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAAC 24039132 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || || || ||||| ||||| || ||||| Sbjct 24039131 TTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACGAATATTTGCAT 24039084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462291361764400