Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq162968 120 5e-22 seq169900 104 4e-17 seq156471 104 4e-17 seq38015 104 4e-17 seq119584 98.7 1e-15 seq55212 98.7 1e-15 seq1864 98.7 1e-15 seq63669 95.1 2e-14 seq21302 91.5 2e-13 seq51605 86.0 9e-12 seq38014 84.2 3e-11 seq37023 84.2 3e-11 >seq162968 Length=322 Score = 120 bits (132), Expect = 5e-22 Identities = 149/203 (73%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| |||||| | || || |||||||| || || || ||| | || | ||| Sbjct 271 ATGCAGATATTTGTCAAAACCCTAACAGGGAAGACCATTACTCTTGAAGTAGAAAGCTCG 212 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| || | ||| ||||||||||| || ||||| || || ||||||||| Sbjct 211 GATACAATTGAAAACGTCAAAGCAAAAATTCAAGACAAGGAAGGGATTCCTCCTGATCAA 152 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || ||||| ||||| || |||| ||| | |||||| | | ||| ||||| Sbjct 151 CAGAGGCTAATCTTTGCTGGAAAGCAGCTAGAAGATGGGCGAACACTCGCAGA-TATAAC 93 Query 124719 ATTCAAAAAGAATCAACTTTGCA 124741 || ||||| || || ||| |||| Sbjct 92 ATCCAAAAGGAGTCCACTCTGCA 70 >seq169900 Length=516 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || ||||| || ||||| || || | || | ||| Sbjct 431 ATGCAAATCTTCGTTAAAACCCTAACCGGAAAAACCATCACCCTCGAAGTCGAAAGCTCC 372 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || ||||||||||| |||||||| || || ||||| ||| Sbjct 371 GATACTATTGATAACGTGAAGGCCAAAATTCAAGACAAAGAAGGCATCCCCCCTGACCAA 312 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || || || || ||||| || | || ||| | || || | | || || || Sbjct 311 CAACGTCTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTGCTGACTACAAC 252 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| |||||| | || ||||| | ||| | || |||||||| Sbjct 251 ATTCAAAAAGAGTCAACTCTTCACTTGGTGCTCCGTCTCCGTGGTGGTAT 202 >seq156471 Length=3476 Score = 104 bits (114), Expect = 4e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| | || || || || || ||| | ||| |||| ||| Sbjct 1900 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 1959 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||| | ||| | || ||||| ||||| || |||||||| || || ||||| Sbjct 1960 -GACACAGTCGACAATGTGAAGGCAAAAATCCAAGACAAGGAAGGTATCCCTCCGGATCA 2018 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| | ||||||||||| |||||| | |||||| | ||||| | | ||||| || Sbjct 2019 GCAAAGATTGATTTTTGCAGGCAAACAACTCGAGGATGGCAGAACACTGGCGGATTACAA 2078 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||| || | ||| | || | || || ||||||| || Sbjct 2079 CATACAAAAAGAATCGACCCTTCATCTTGTGCTGCGATTGAGAGGTGGGAT 2129 >seq38015 Length=2403 Score = 104 bits (114), Expect = 4e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| || | || || ||||| || || || || ||| | || | || ||| Sbjct 2399 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTCC 2340 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| | || ||| ||||| ||||||||||| || || || ||||| Sbjct 2339 -GACACAATCGACAATGTGAAGGCGAAGATTCAGGATAAAGAAGGAATCCCTCCCGATCA 2281 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| ||||||||||| ||||| | || ||| | | ||||| | || || || Sbjct 2280 GCAGAGGCTGATTTTTGCAGGCAAACAGCTGGAAGATGGAAGGACATTGGCGGACTACAA 2221 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 ||||| || || || || |||||||||||| Sbjct 2220 CATTCAGAAGGAGTCGACATTGCATTTGGTT 2190 >seq119584 Length=3068 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688 || ||||||||||| || || ||||| || || ||||| || ||||| || |||||||| Sbjct 2247 CAGGATAAAGAAGGAATCCCTCCTGACCAGCAGAGGCTGATATTTGCTGGTAAACAATTG 2306 Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 || ||| | |||| || | ||||| ||||| ||||||||||||||| | || | ||| Sbjct 2307 GAAGATGGCAGAACTTTGGCGGATTACAATATCCAAAAAGAATCAACTCTTCACCTTGTT 2366 Query 124749 TT 124750 || Sbjct 2367 TT 2368 >seq55212 Length=5247 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| ||||| ||||| || || ||| | ||| | || Sbjct 2529 ATGCAGATCTTTGTCAAGACTCTAACTGGCAAGACGATTACTCTTGAGGTCGAGAGTTCC 2588 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || |||| | || || ||||||||||| ||||| || ||||| ||||| Sbjct 2589 GATACCATCGATAATGTTAAGGCTAAGATTCAAGATAAGGAAGGAATCCCACCAGATCAG 2648 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || ||||| |||||||| | || ||| || | || ||| ||||| ||| Sbjct 2649 CAGAGGCTGATCTTTGCCGGAAAACAGCTCGAAGATGGTAGGACCCTAGCGGATTACAAT 2708 Query 124719 ATTCAAAAAGAATCAAC 124735 || || || || || || Sbjct 2709 ATCCAGAAGGAGTCCAC 2725 >seq1864 Length=9564 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| |||||| | ||||| | || || || || || ||| | ||| |||| || | Sbjct 3604 ATGCAGATATTTGTGAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGAGTTCA 3545 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || || |||| | || || |||||||| || |||||||| || || ||||| Sbjct 3544 -GACACCATCGATAATGTGAAGGCAAAGATTCAAGACAAGGAAGGTATCCCTCCGGATCA 3486 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| | || |||||||| ||||| | |||||| | ||||| | | || || || Sbjct 3485 GCAAAGATTGATCTTTGCAGGCAAACAGCTTGAGGATGGCAGAACACTGGCGGACTACAA 3426 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| || || || | ||| | || | || || ||||||| || Sbjct 3425 TATTCAAAAGGAGTCGACCCTCCATCTCGTGCTGCGATTGAGAGGTGGGAT 3375 Score = 87.8 bits (96), Expect = 3e-12 Identities = 161/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AG--CA 124595 ||||| || ||| | ||||| | ||||| || || || ||| | ||| |||| || || Sbjct 3832 ATGCAGATTTTTGTGAAGACCTTGACAGGAAAGACCATCACTTTGGAGGTTGAGAGTTCA 3773 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 || || || |||| | || || |||||||| || |||||||| || || ||| Sbjct 3772 AAC---ACCATCGATAATGTGAAGGCAAAGATTCAAGACAAGGAAGGTATCCCTCCGGAT 3716 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || || || | || |||||||| || || | || ||| | | ||| | | ||||| Sbjct 3715 CAGCAGAGATTGATCTTTGCAGGCAAGCAGCTTGAAGATGGCAGGACACTGGCTGATTAC 3656 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||||||||| || | ||| | || | || || ||||||| || Sbjct 3655 AATATCCAAAAAGAATCTACCCTTCATCTCGTGCTGCGCTTGAGAGGTGGGAT 3603 >seq63669 Length=360 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || ||||| || ||||| || || | || ||||| Sbjct 104 ATGCAGATCTTCGTGAAAACCCTAACTGGAAAAACCATCACCCTCGAAGTTGAAAGTTCG 163 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| |||| |||||||||||||| ||||| || || || ||||| Sbjct 164 GATACTATTGACAATGTAAAGGCAAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAG 223 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || || ||||| ||||| || | || || | || || | | || || || Sbjct 224 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAAGACGGCCGTACTCTTGCTGACTACAAC 283 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| ||||| | || ||||| | ||| | || ||||| || Sbjct 284 ATTCAAAAAGAGTCAACCCTTCACTTGGTGCTCCGTCTCCGTGGTGGCAT 333 >seq21302 Length=5313 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || ||||| || || || | ||| | || Sbjct 3312 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATTACCCTCGAGGTCGAGAGTTCC 3371 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| || |||||||| || || || || || || ||||| Sbjct 3372 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAGGAGGGAATCCCTCCAGATCAG 3431 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || || || ||||||||| | || ||| | || || | | ||||| ||| Sbjct 3432 CAGAGGCTAATCTTCGCTGGAAAACAACTTGAAGATGGACGTACCCTGGTGGATTACAAT 3491 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||||||||| | ||| | || | || | || ||||| || Sbjct 3492 ATCCAGAAAGAATCAACCCTCCATCTTGTCCTCCGCCTTCGTGGTGGAAT 3541 >seq51605 Length=8292 Score = 86.0 bits (94), Expect = 9e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688 || ||||||||||| || || ||||| || || ||||| || ||||| || ||||| || Sbjct 6694 CAGGATAAAGAAGGCATTCCTCCTGACCAGCAGAGGCTAATATTTGCCGGTAAACAGTTG 6635 Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAAC 124735 || ||| || | || || | |||||| || || || ||||||||||| Sbjct 6634 GAAGATGGTAGGACCTTGGCAGATTACAACATCCAGAAAGAATCAAC 6588 >seq38014 Length=3548 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 124622 GAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAA 124681 ||| || || ||||| ||||| || || || ||||| || ||||| ||||||||||| || Sbjct 1126 GAAGATCCAGGATAAGGAAGGAATCCCTCCCGATCAGCAGAGGCTGATTTTTGCAGGCAA 1067 Query 124682 ACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCA 124741 || | || ||| | | || || | || || || |||||||| || || || ||||| Sbjct 1066 GCAGCTGGAAGATGGAAGGACTTTGGCGGACTACAACATTCAAAAGGAGTCGACATTGCA 1007 Query 124742 TTTGGT 124747 |||||| Sbjct 1006 TTTGGT 1001 >seq37023 Length=9928 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 ||| || || ||||| || || ||||| || ||||| || |||||||| || ||| | | Sbjct 214 AGGAATCCCTCCTGACCAGCAGAGGCTGATATTTGCTGGTAAACAATTGGAAGATGGCAG 273 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 ||| || | ||||| ||||| ||||||||||||||| | || | ||||| Sbjct 274 AACTTTGGCGGATTACAATATCCAAAAAGAATCAACTCTTCACCTTGTTTT 324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753653519756800