Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq156471 87.8 1e-12 >seq156471 Length=3476 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| || ||||| || || || || || || | || || || |||| Sbjct 1900 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACCATCACTTTGGAGGTTGA---GAGC 1956 Query 24892 ---GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGAC 24948 |||| || || | ||| |||| |||||| | || ||||| | || || Sbjct 1957 TCCGACACAGTCGACAATGTGAAGGCAAAAATCCAAGACAAGGAAGGTATCCCTCCGGAT 2016 Query 24949 CAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTAC 25008 |||||| | || || | ||| ||||||||||| || ||| || || || |||||| Sbjct 2017 CAGCAAAGATTGATTTTTGCAGGCAAACAACTCGAGGATGGCAGAACACTGGCGGATTAC 2076 Query 25009 AGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 | |||||| ||||| | || |||||| | ||| | |||||| | || || Sbjct 2077 AACATACAAAAAGAATCGACCCTTCATCTTGTGCTGCGATTGAGAGGTGG 2126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417330898881920