Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq156471 113 5e-20 seq38015 98.7 1e-15 seq162968 95.1 1e-14 seq21302 93.3 4e-14 seq169900 89.7 5e-13 seq53616 87.8 2e-12 seq38014 86.0 6e-12 seq1864 86.0 6e-12 seq63669 84.2 2e-11 seq119584 82.4 8e-11 >seq156471 Length=3476 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || |||| || | ||||| || ||||||||||||||||||||||| | Sbjct 2126 CCACCTCTCAATCGCAGCACAAGATGAAGGGTCGATTCTTTTTGTATGTTGTAATCCGCC 2067 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || || ||||||||||| || ||| | |||| | ||||||||| ||||| Sbjct 2066 AGTGTTCTGCCATCCTCGAGTTGTTTGCCTGCAAAAATCAATCTTTGCTGATCCGGAGGG 2007 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| |||||| || | | || || ||||| | | || || Sbjct 2006 ATACCTTCCTTGTCTTGGATTTTTGCCTTCACATTGTCGACTGTGTCGGAGCTCTCAACC 1947 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | ||||| || ||||| || || || || || ||||| Sbjct 1946 TCCAAAGTGATGGTCTTCCCCGTCAAGGTCTTCACAAAAATCTGCAT 1900 >seq38015 Length=2403 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031 || ||| ||||| | ||| || || || || |||||||| || || ||| || || Sbjct 2187 CAGAACCAAATGCAATGTCGACTCCTTCTGAATGTTGTAGTCCGCCAATGTCCTTCCATC 2246 Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 ||| || ||||| || ||| | ||||| | |||||||||||||| || |||||||| || Sbjct 2247 TTCCAGCTGTTTGCCTGCAAAAATCAGCCTCTGCTGATCGGGAGGGATTCCTTCTTTATC 2306 Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151 ||| || || | | || | ||||| | | || ||||| | ||| | ||| Sbjct 2307 CTGAATCTTCGCCTTCACATTGTCGATTGTGTCGGAGCTCTCGACTTCCAGAGTGATCGT 2366 Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| || || | ||||| ||||| ||||||||| Sbjct 2367 CTTCCCAGTTAGGGTTTTGACGAAGATTTGCATA 2400 >seq162968 Length=322 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 142956 GGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGC 143015 ||||||| || | || | ||| | || | || || || ||||| ||||| || || Sbjct 44 GGCCTCCACGAAGGCGAAGAACAAGGTGCAGAGTGGACTCCTTTTGGATGTTATATCTGC 103 Query 143016 TCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | ||| | | ||||| || || || |||||| |||| || | || ||||| |||| Sbjct 104 G-AGTGTTCGCCCATCTTCTAGCTGCTTTCCAGCAAAGATTAGCCTCTGTTGATCAGGAG 162 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | || ||||| ||||| ||||||| ||| | | ||| | || |||| | ||||| Sbjct 163 GAATCCCTTCCTTGTCTTGAATTTTTGCTTTGACGTTTTCAATTGTATCCGAGCTTTCTA 222 Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||| ||| | ||||| || || | ||||| || ||||| ||||| Sbjct 223 CTTCAAGAGTAATGGTCTTCCCTGTTAGGGTTTTGACAAATATCTGCAT 271 >seq21302 Length=5313 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||| || | ||||| || ||||| ||||||||||||||||| || || || Sbjct 4210 CGCAGCACAAGATGAAGGGTCGATTCCTTTTGTATGTTGTAATCCGCCAGCGTTCTGCCA 4151 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| || ||||| || ||| |||||| | |||||||| ||||| || ||||| ||| Sbjct 4150 TCTTCAAGCTGTTTGCCTGCAAAGATCAACCTCTGCTGATCCGGAGGGATCCCTTCCTTG 4091 Query 143090 TC-GGTAATTTTTTGTTTTAGC-TGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCA 143147 || ||| |||| | ||| | | || || ||||| | | || || || | ||| | Sbjct 4090 TCTTGTA--TTTTCGCCTTAACATTGTCGACTGTGTCGGAGCTCTCAACCTCCAAAGTGA 4033 Query 143148 CCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| || ||||| || || || || || ||||| Sbjct 4032 TGGTCTTTCCAGTCAAGGTCTTCACAAAAATCTGCAT 3996 >seq169900 Length=516 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || || |||||||| ||||| || || | || | |||||||| ||| Sbjct 1 TGAAGAGTTGACTCTTTTTGGATGTTATAGTCAGCAAGAGTACGACCATCTTCGAGCTGT 60 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 ||||||||| |||| || || ||||| || || || || ||||||||||| |||||| Sbjct 61 TTACCAGCAAAGATGAGGCGCTGCTGGTCAGGCGGGATCCCTTCTTTGTCTTGAATTTTG 120 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | ||||| | | ||| ||||||| ||| | || || || || Sbjct 121 GCCTTCACGTTGTCGATAGTGTCGGAGCTTTCCACTTCAAGAGTGATGGTTTTTCCAGTT 180 Query 143162 AATGTTTTTACGAATATTTGCATA 143185 | || || |||||||| |||||| Sbjct 181 AGGGTCTTGACGAATATCTGCATA 204 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | || || |||| || || |||||||| |||||||| || Sbjct 205 CCACCACGGAGACGGAGCACCAAGTGAAGAGTTGACTCTTTTTGAATGTTGTAGTCAGCA 264 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||||| || || || || || ||||||||||||| || || || || Sbjct 265 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATCAGACGTTGTTGGTCAGGGGGG 324 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||||||||| |||||| || | | || | || || | | ||| ||| Sbjct 325 ATGCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTATCAATAGTATCGGAGCTTTCGACT 384 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | || || ||||| | ||||| ||||| ||||||||| Sbjct 385 TCGAGGGTGATGGTTTTTCCGGTTAGGGTTTTAACGAAGATTTGCATA 432 >seq53616 Length=2978 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 143034 ||| ||||| | ||| || || ||||| |||||||| || || || || ||||| Sbjct 1734 AACCAAATGCAATGTCGACTCCTTTTGAATGTTGTAGTCCGCCAAAGTCCTTCCATCTTC 1675 Query 143035 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 143094 || || || || || | ||||| | |||||||||||||| || ||||| || || Sbjct 1674 CAGCTGCTTGCCTGCGAAAATCAGTCTCTGCTGATCGGGAGGGATTCCTTCCTTATCCTG 1615 Query 143095 AATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTT 143154 ||| || || | | || | |||||| | | || ||||| | ||| | |||||| Sbjct 1614 AATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCGACTTCCAGAGTGATCGTCTT 1555 Query 143155 GCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || | ||||| ||||| ||||||||| Sbjct 1554 CCCAGTTAGGGTTTTGACGAAGATTTGCATA 1524 >seq38014 Length=3548 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || ||||| | ||| || || ||||| |||||||| || || || || ||||| Sbjct 1001 ACCAAATGCAATGTCGACTCCTTTTGAATGTTGTAGTCCGCCAAAGTCCTTCCATCTTCC 1060 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || || ||| | ||||| | |||||||||||||| || ||||| || || Sbjct 1061 AGCTGCTTGCCTGCAAAAATCAGCCTCTGCTGATCGGGAGGGATTCCTTCCTTATCCTGG 1120 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || | | || | |||||| | | || ||||| | ||| | |||||| Sbjct 1121 ATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCGACTTCCAGAGTGATCGTCTTC 1180 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185 || || | ||||| ||||| ||||||||| Sbjct 1181 CCAGTTAGGGTTTTGACGAAGATTTGCATA 1210 >seq1864 Length=9564 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || |||| || | ||||| |||||||||||||| || |||||||| | Sbjct 3606 CCACCTCTCAAGCGCAGCACGAGATGAAGGGTAGATTCTTTTTGGATATTGTAATCAGCC 3665 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| || || || || ||| |||||| | |||||||| ||||| Sbjct 3666 AGTGTCCTGCCATCTTCAAGCTGCTTGCCTGCAAAGATCAATCTCTGCTGATCCGGAGGG 3725 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||| ||| || | | || | |||| | || || Sbjct 3726 ATACCTTCCTTGTCTTGAATCTTTGCCTTCACATTATCGATGGTGTTTGAACTCTCAACC 3785 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | ||||| || ||||| || || || || || ||||| Sbjct 3786 TCCAAAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAAATCTGCAT 3832 >seq63669 Length=360 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||| | || || |||| || || |||||||| |||||||| || Sbjct 331 GCCACCACGGAGACGGAGCACCAAGTGAAGGGTTGACTCTTTTTGAATGTTGTAGTCAGC 272 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | |||||| || || || || ||| |||| |||||||||||||| || || Sbjct 271 AAGAGTACGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGGGG 212 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || ||||||| |||| | || | || |||| ||| || Sbjct 211 GATTCCTTCCTTATCTTGAATTTTTGCCTTTACATTGTCAATAGTATCCGAACTTTCAAC 152 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||| | || | || || || || | ||||| ||||| || |||||| Sbjct 151 TTCGAGGGTGATGGTTTTTCCAGTTAGGGTTTTCACGAAGATCTGCATA 103 >seq119584 Length=3068 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031 |||||| | |||| || ||||||||||| || |||||||| || || || || Sbjct 2369 CAAAACAAGGTGAAGAGTTGATTCTTTTTGGATATTGTAATCCGCCAAAGTTCTGCCATC 2310 Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091 ||| | ||||||||||||| | ||||| | ||||| || ||||| || |||||||| || Sbjct 2309 TTCCAATTGTTTACCAGCAAATATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTATC 2250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505804688992320