Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq156471 93.3 4e-14 seq119584 89.7 4e-13 seq37023 87.8 2e-12 seq55212 82.4 6e-11 >seq156471 Length=3476 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || | || ||| | ||| || || ||||||||||||||||||||||| || Sbjct 2126 CCACCTCTCAATCGCAGCACAAGATGAAGGGTCGATTCTTTTTGTATGTTGTAATCCGCC 2067 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | ||| || | ||||||||| ||| |||| | || || ||||| || Sbjct 2066 AGTGTTCTGCCATCCTCGAGTTGTTTGCCTGCAAAAATCAATCTTTGCTGATCCGGAGGG 2007 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGT-TCCGT 20160 | ||||| ||||| |||||| ||||| | | | || | ||| || | || Sbjct 2006 ATACCTTCCTTGTCTTGGATTTTTGCCTTCACATTGTCGACTGTGTCG-GAGCTCTCAAC 1948 Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || ||||| || || ||||| || || |||||||| ||||| Sbjct 1947 CTCCAAAGTGATGGTCTTCCCCGTCAAGGTCTTCACAAAAATCTGCAT 1900 >seq119584 Length=3068 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/146 (74%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| ||||||| | | |||||| || | || || || ||||||||||| || Sbjct 2395 TTGATCATCGTTCCTCCCCTGAGCCTCAAAACAAGGTGAAGAGTTGATTCTTTTTGGATA 2336 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 |||||||| ||| |||| | ||||||||||||||| || ||| | || |||||||| Sbjct 2335 TTGTAATCCGCCAAAGTTCTGCCATCTTCCAATTGTTTACCAGCAAATATCAGCCTCTGC 2276 Query 20090 TGATCGACGGGCACGCCTTCTTTGTC 20115 || || || | |||||||| || Sbjct 2275 TGGTCAGGAGGGATTCCTTCTTTATC 2250 >seq37023 Length=9928 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/125 (76%), Gaps = 1/125 (1%) Strand=Plus/Minus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| ||||||| | | |||||| || | || || || ||||||||||| || Sbjct 351 TTGATCATCGTTCCTCCCCTGAGCCTCAAAACAAGGTGAAGAGTTGATTCTTTTTGGATA 292 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 |||||||| ||| |||| | ||||||||||||||| || ||| | || |||||||| Sbjct 291 TTGTAATCCGCCAAAGTTCTGCCATCTTCCAATTGTTTACCAGCAAATATCAGCCTCTGC 232 Query 20090 TGATC 20094 || || Sbjct 231 TGGTC 227 >seq55212 Length=5247 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| |||||||| |||| |||||| || ||||| || || || |||||||| | Sbjct 2983 CCACCTCTCAACCTCAAAACCAGATGTAGGGTCGATTCCTTCTGGATATTGTAATCAGCT 2924 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | || || | ||| || || ||| | || | | ||| || || || Sbjct 2923 AGGGTTCGACCGTCCTCGAGTTGCTTCCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 2864 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGT-TCCGT 20160 | |||||| ||||| ||| || || || | | | | | ||| | || | || Sbjct 2863 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTATC-CGAGCTCTCAAC 2805 Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||| | ||| |||||||| ||||| | |||||| ||||||||||||||| Sbjct 2804 TTCAAGGGTGATGGTTTTTCCGGTGAGCGTTTTCACAAAAATTTGCATT 2756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418611113772156