Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq63777 168 1e-37 seq17337 145 1e-30 seq46100 138 2e-28 seq29178 129 9e-26 seq66650 122 1e-23 seq25531 113 7e-21 seq590 109 9e-20 seq140618 95.1 2e-15 seq59732 91.5 2e-14 seq738 87.8 3e-13 seq19181 86.0 1e-12 seq112919 82.4 1e-11 seq176693 80.6 4e-11 >seq63777 Length=340 Score = 168 bits (186), Expect = 1e-37 Identities = 174/225 (77%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct 230 GCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 172 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 171 CCGTCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAGGAGAC 112 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| |||||| |||||| || || |||| ||| || || || || || Sbjct 111 CCGTGGTGTTCTGAAGACCTTCCTTGAGGGTGTCATCCGTGACGCCGTCACATACACTGA 52 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||| || || ||||||||||| || | ||| | ||||| || Sbjct 51 GCACGCCAAGCGCAAGACTGTCACTTCTCTCGATGTTGTCTACGC 7 >seq17337 Length=1863 Score = 145 bits (160), Expect = 1e-30 Identities = 172/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 ||||||||||| || ||||| ||||| || ||||| ||||||||||| ||||| || || Sbjct 668 GATAACATCCAGGGGATCACGAAGCCGGCCATCCGCCGTCTGGCTCGCCGTGGCGGCGTG 727 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || || | |||| || |||| ||| | || | |||||||| | || Sbjct 728 AAGCGTATCAGCGGCCTCATCTACGAGGAGACTCGCGGCGTGCTCAAGATCTTTTTGGAG 787 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||||||| ||| ||| | ||| || ||||||||| | |||||||||||| || Sbjct 788 AATGTTATCCGTGACGCTGTGACCTACACTGAGCACGCTCGGAGGAAGACTGTCACCGCC 847 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 |||||| | || ||||| |||| | || ||||||| | |||||||| || Sbjct 848 ATGGATGTGGTTTATGCTCTGAAGAGGCAGGGCCGTACTCTCTATGGTTTCGG 900 >seq46100 Length=8837 Score = 138 bits (152), Expect = 2e-28 Identities = 179/245 (73%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || || || |||||||||||||| ||||| ||||| || || Sbjct 7507 GCGAAGCGCCATCGCAAGGTC-CTCCGCGATAACATCCAAGGCATCACAAAGCCGGCCAT 7449 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || |||||||| ||||| || ||||||||| || ||| | |||||||||||| Sbjct 7448 TCGCCGCCTGGCTCGCCGTGGCGGCGTCAAGCGTATCAGTGGGCTAATCTATGAAGAGAC 7389 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||||| || || ||| || |||| || || || ||| ||||| Sbjct 7388 GCGCGGAGTGCTGAAGATTTTTCTTGAGAATGTCATCCGCGACGCCGTCACCTACACCGA 7329 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| ||| || ||||| || || ||||||| | || || || |||| | || || Sbjct 7328 GCATGCTCGTCGCAAGACGGTGACGGCCATGGACGTGGTGTACGCTCTGAAGAGGCAGGG 7269 Query 16672 CCGTA 16676 ||||| Sbjct 7268 CCGTA 7264 >seq29178 Length=5719 Score = 129 bits (142), Expect = 9e-26 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| |||||||| ||||| || ||||| || ||||| || | || Sbjct 3294 CTCCGGGACAACATCCAGGGAATCACGAAGCCGGCGATCCGCCGCCTGGCCCGCAGGGGC 3235 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||||| || || || | || ||||| | ||| | ||||||||||||||| Sbjct 3234 GGCGTCAAGCGCATCAGCGGCCTGATTTACGAAGAAACTCGCGGCGTTTTGAAGATCTTC 3175 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| ||| ||| || ||| ||||||||||| || || || || Sbjct 3174 CTCGAGAACGTCATCCGTGACGCTGTCACCTACACCGAGCACGCCCGCCGGAAAACGGTG 3115 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 || | |||||| |||| || || | || | || ||||| Sbjct 3114 ACGGCGATGGATGTCGTTTACGCTCTCAAGAGGCAGGGCCG 3074 >seq66650 Length=757 Score = 122 bits (134), Expect = 1e-23 Identities = 160/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 16455 TTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTG 16514 |||||||||||||||| || ||||||| || || ||| | | || || |||||||||| Sbjct 130 TTCGAGATAACATCCAGGGCGTCACCAAACCTGCCATCAGAAGGCTTGCCCGTCGTGGTG 189 Query 16515 GAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTT--TGAAGATCTT 16572 | || ||| | ||||||| | |||||||||| | | ||| || | | || ||||| Sbjct 190 GTGTTAAGAGCATCTCTGGTCTCATCTATGAAGAAA--CCTGAGGTATCCTCAAAATCTT 247 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 | | | | |||||| |||||| || ||| || ||||| || || |||| ||| Sbjct 248 CTTGGAAAATGTTATCAGAGATGCTGTCACCTACACAGAGCATCCTCGTCGGAAGATTGT 307 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||| |||||||| ||||||||||| | || | |||||| Sbjct 308 CACTGCCATGGATGTCGTCTATGCACTCAAGAGGCAAGGC 347 >seq25531 Length=8842 Score = 113 bits (124), Expect = 7e-21 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| | || | || |||||||| || ||||||||||| || || Sbjct 3257 CGCCAAGCGCCACCGCAAAGTGCTGAGGGACAACATCCAGGGCATCACCAAGCCGGCCAT 3316 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || || || || || || ||||||||| || || | |||| || |||| Sbjct 3317 CCGCCGCCTCGCGCGGCGCGGCGGCGTCAAGCGTATCAGCGGCCTCATCTACGAGGAGAC 3376 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | |||||||||||| ||| ||| |||| || || || ||| ||||| Sbjct 3377 GCGCGGCGTCCTCAAGATCTTCCTCGAGAACGTCATCCGCGACGCCGTCACCTACACCGA 3436 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||| || ||||| || || | ||||| ||||||| || Sbjct 3437 GCACGCCCGCCGGAAGACCGTGACGGCGATGGACGTCGTCTACGC 3481 >seq590 Length=9497 Score = 109 bits (120), Expect = 9e-20 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || ||||| ||||| || ||||| || || || || ||| | Sbjct 705 CTCCGCGACAACATCCAGGGCATCACGAAGCCGGCCATCCGCCGCCTAGCCCGCCGTTGC 764 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || |||||||| || || | |||| || |||| ||| | || | ||||| ||| Sbjct 765 GGCGTCAAGCGCATCAGCGGTCTCATCTACGAGGAGACTCGCGGCGTCCTCAAGATATTC 824 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| ||| || || ||| ||||||||||| || ||||| || Sbjct 825 CTCGAGAACGTCATCCGTGACGCCGTCACCTACACCGAGCACGCCCGCCGCAAGACGGTG 884 Query 16634 ACCTCCATGGATATCGTCTATGC 16656 || ||||||| ||||||| || Sbjct 885 ACTGCCATGGACGTCGTCTACGC 907 >seq140618 Length=512 Score = 95.1 bits (104), Expect = 2e-15 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 16539 TCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTT 16598 |||||||||| | ||| | |||| | || |||||| | | | |||||| |||||| Sbjct 9 TCTATGAAGAAACTCGAGGTGTTCTCAAAATCTTCTTGGAAAATGTTATCAGAGATGCTG 68 Query 16599 TCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCAT 16658 || ||| || ||||| ||| |||||||||||||| |||||||| |||||||||| Sbjct 69 TCACCTACACAGAGCATGCTCGTCGTAAGACTGTCACTGCCATGGATGTCGTCTATGCCC 128 Query 16659 TGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 | || | |||||| | || ||||| |||||| Sbjct 129 TCAAGAGGCAAGGCAAGACTATCTATGGCTTTGGA 163 >seq59732 Length=2399 Score = 91.5 bits (100), Expect = 2e-14 Identities = 172/251 (69%), Gaps = 13/251 (5%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || || || ||||| || ||||| || ||||| | | || Sbjct 1276 CTCCGCGACAACATCCAGGGTATAACGAAGCCCGCCATCCGCCGCCTGGCCAGGAGAGGC 1335 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||||| |||| || | |||| || || | ||||| ||| ||||||||||| Sbjct 1336 GGCGTGAAGCGAATCTCCGGTCTCATCTACGAGGAAACTCGTGGAGTTCTGAAGATCTTC 1395 Query 16574 CTCAAGACCGT----------TATCCATGATGCTTTCCACTATACCGAGCACGCTAA-AC 16622 | ||| ||| ||| | ||| || || ||| ||||||||||| || Sbjct 1396 TTGGAGAACGTGAGATCGGAGTATTCGTGACGCCGTCACCTACACCGAGCACGCCAAGGA 1455 Query 16623 GTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT- 16681 | ||| | |||||| ||||||| ||||||| || | || | || |||| || ||| Sbjct 1456 GGAAG-CCGTCACCGCCATGGACGTCGTCTACGCTCTCAAGAGGCAGGGCCAGAACATTG 1514 Query 16682 TATGGTTTTGG 16692 || ||||| || Sbjct 1515 TACGGTTTCGG 1525 >seq738 Length=10688 Score = 87.8 bits (96), Expect = 3e-13 Identities = 177/261 (68%), Gaps = 9/261 (3%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || || | ||||||||||| || ||||| ||| || || Sbjct 653 GCAAAGCGCCATCGCA-AGGTCCTCAGGGATAACATCCAGGGCATCACGAAGGGCGCGAT 711 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | ||| || ||||| || ||||||||| || || | | || || |||| Sbjct 712 TC-------GGCCCGCCGTGGCGGCGTCAAGCGTATCAGCGGTCTCATTTACGAGGAGAC 764 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || | |||||||| || ||| ||| |||| ||| || || ||| || || Sbjct 765 ACGTGGCGTCCTCAAGATCTTTCTGGAGAACGTCATCCGTGACGCCGTCACCTACACAGA 824 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||| || ||||| || || | ||||| ||||||| || | || | || || Sbjct 825 GCACGCTCGCCGGAAGACCGTGACGGCGATGGACGTCGTCTACGCTCTCAAGAGGCAGGG 884 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | || ||||| || Sbjct 885 CCGAACCCTCTACGGTTTCGG 905 >seq19181 Length=6436 Score = 86.0 bits (94), Expect = 1e-12 Identities = 179/258 (69%), Gaps = 14/258 (5%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGA-ATCACCAAGCCA--GCTATCCGTCGTCTGGCTCGTCGT 16510 || || || ||||||||||| ||||| ||||| || ||||| || || || || ||| Sbjct 5185 CTCCGCGACAACATCCAAGGGCATCACGAAGCCTCCGCCATCCGCCGCCTAGCCCGCCGT 5126 Query 16511 GGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA-TTCGTGATGTTTTGAAGAT 16569 || || |||||||| || ||| | |||| || |||| |||||| || | ||||| Sbjct 5125 GGCGGCGTCAAGCGCATCAGTGGCCTCATCTACGA-GAGACTTCGTGGCGTGCTCAAGAT 5067 Query 16570 CTTCCTCAAGAC-CGTTATCCATGATGCTTTCCACTATACCGAGCACG-CTAAACGTAAG 16627 |||||| ||| ||| |||| ||| || || ||| |||||||||| | || ||| Sbjct 5066 CTTCCTGGAGAAACGTCATCC-TGACGCCGTCACCTACACCGAGCACGCCCCGCCGCAAG 5008 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAG------ATT 16681 || || || | ||||| ||||| || | | ||| || || |||| | || Sbjct 5007 ACGGTGACGGCGATGGACTGGGTCTACGCGTCAATACGGCAGGGGCGTACGCTCTTACTT 4948 Query 16682 TATGGTTTTGGAAGTTAA 16699 || ||||| ||| ||||| Sbjct 4947 TACGGTTTCGGAGGTTAA 4930 >seq112919 Length=1127 Score = 82.4 bits (90), Expect = 1e-11 Identities = 163/235 (69%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGA-GATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||| ||| | || || | ||||||| |||||| ||||| || | | || Sbjct 396 GCAAAGCGCCATTGCA-AGGTCCTCCATGATAACACCCAAGGCATCACAAAACTGACCAT 454 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTC-TC--TGGATTGGTCTATGAAGA 16548 || || ||||||| || || | |||||| || || || ||||||| |||||||||| Sbjct 455 TCGCCGCCTGGCTCACCGCGGCAGCGTCAAGTGTATCATCAGTGGATTGATCTATGAAGA 514 Query 16549 GATTC-GTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATA 16607 ||| | || |||||||| || || ||| || |||| || ||| || ||| Sbjct 515 GATGCACAGAGTGCTTGAAGATTTTTCTTGAGAATGTCATCCGCGACGCTGTCACCTACG 574 Query 16608 CCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAA 16662 ||||||| ||| | ||||| || | ||||||| | || ||||| |||| Sbjct 575 CCGAGCATGCTCGCTGCAAGACGGTAATGGCCATGGACGTGGTGTATGCTGTGAA 629 >seq176693 Length=360 Score = 80.6 bits (88), Expect = 4e-11 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588 ||||| ||| | ||||| || | | | ||| ||||||||||||| ||| || ||| Sbjct 1 TCTGGTTTGATTTATGAGGAAACGAGAGGCGTTCTGAAGATCTTCCTGGAGAATGTGATC 60 Query 16589 CATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATC 16648 |||||| | ||| || ||||| || | | | ||||||||||| |||||||| || Sbjct 61 AGAGATGCTGTGACCTACACAGAGCATGCCAGAAGGAAGACTGTCACGGCCATGGATGTC 120 Query 16649 GTCTATGCATTGAA 16662 |||||||| |||| Sbjct 121 GTCTATGCCCTGAA 134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78900680737068