Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq21302 111 2e-19 seq38015 102 8e-17 seq53616 100 3e-16 seq156471 98.7 9e-16 seq1864 96.9 3e-15 seq38014 91.5 1e-13 seq169900 86.0 6e-12 seq48530 86.0 6e-12 >seq21302 Length=5313 Score = 111 bits (122), Expect = 2e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATT--AGAATCAA 26826 |||||| | ||||| || || |||||||||||| | || || | || | ||| | | Sbjct 4224 ATGCAAATCTTTGTGAAGACGTTAACTGGAAAAACCATAACTCTTGAGGTTGAGAGTTCA 4283 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 |||||||| || | || ||| ||||||| |||||||||||||| ||||| |||| Sbjct 4284 --GACACCATTGATAATGTGAAAGCAAAGATTCAAGACAAAGAAGGGATTCCTCCGGATC 4341 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 | || || | || | || ||| || || |||||||||| |||| | |||||||| Sbjct 4342 AGCAGCGATTGATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGAACTCTTGCCGACTATA 4401 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||| || || || || | ||||| || || Sbjct 4402 ACATTCAGAAGGAGTCGACCCTTCATCTTGTGCT 4435 >seq38015 Length=2403 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| ||||||| || ||||||| | ||| | || | Sbjct 2399 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTCC 2340 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || |||||| || |||||||| || ||||||||||| Sbjct 2339 GACACAATCGACAATGTGAAGGCGAAGATTCAGGATAAAGAAGGAATCCCTCCCGATCAG 2280 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || || || |||| | |||||||| || ||||||| || || | || ||||| || Sbjct 2279 CAGAGGCTGATTTTTGCAGGCAAACAGCTGGAAGATGGAAG-GACATTGGCGGACTACAA 2221 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||| || || || || | ||| |||| ||||| || | || |||| Sbjct 2220 CATTCAGAAGGAGTCGACATTGCATTTGGTTCTGAGGCTGCGCGGGGGAA 2171 >seq53616 Length=2978 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| ||||||| || ||||||| | ||| | || | Sbjct 1525 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTCC 1584 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || |||||| || || ||||| || ||||||||||| Sbjct 1585 GACACGATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAAGGAATCCCTCCCGATCAG 1644 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || ||||| |||| || ||||| || || ||||||| || || | || ||||| || Sbjct 1645 CAGAGACTGATTTTCGCAGGCAAGCAGCTGGAAGATGGAAG-GACTTTGGCGGACTACAA 1703 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 ||||||||| || || || | ||| |||| || || || Sbjct 1704 CATTCAAAAGGAGTCGACATTGCATTTGGTTCTCAGGCT 1742 >seq156471 Length=3476 Score = 98.7 bits (108), Expect = 9e-16 Identities = 156/219 (71%), Gaps = 10/219 (5%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA---TC 26824 |||||| | || || || || |||||||||| |||||||| | ||| | ||| || Sbjct 1671 AATGCAGATTTTCGTTAAGACCCTAACTGGAAAGACGATCACCTTGGAAGTCGAAAGCTC 1730 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | |||||||| || | || || ||||| ||||| |||||||| ||||| || Sbjct 1731 A---GACACCATAGACAACGTGAAGGCCAAGATACAGGACAAGGAAGGGATCCCTCCAGA 1787 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGT-CAGCGAC 26942 || |||||| | |||| | || || ||||||||||||| ||||| || | || || Sbjct 1788 CCAGCAAAGATTGATTTTTGCTGGAAAGCAACTCGAAGATGGTAGAACACTTGCA--GAT 1845 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || || || || ||||| || || ||||||| || ||| Sbjct 1846 TACAATATCCAGAAAGAGTCCACCCTCCATCTTGTGCTG 1884 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 ||||| ||||| || ||||| ||||| |||||| | |||| | |||||||||||||| Sbjct 1993 GACAAGGAAGGTATCCCTCCGGATCAGCAAAGATTGATTTTTGCAGGCAAACAACTCGAG 2052 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| |||| | || || ||||| ||||||||||| || | ||||| || ||| Sbjct 2053 GATGGCAGAACACTGGCGGATTACAACATACAAAAAGAATCGACCCTTCATCTTGTGCTG 2112 Query 26982 AGACTTAGAGGAGG 26995 || | ||||| || Sbjct 2113 CGATTGAGAGGTGG 2126 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATT--AGAATCAA 26826 ||||| | ||||| || || || ||||||||| | || || | || | ||| | | Sbjct 2128 ATGCAGATCTTTGTGAAGACCTTGACTGGAAAAACCATAACTCTGGAGGTTGAGAGTTCA 2187 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 ||||||||||| | || || ||||||| |||||||||||||| ||||| |||| Sbjct 2188 --GACACCATCGATAATGTTAAGGCAAAGATTCAAGACAAAGAAGGGATTCCTCCGGATC 2245 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 | || || | || | || || || || |||||||||| |||| | ||| || | Sbjct 2246 AGCAGCGATTGATCTTCGCTGGTAAGCAGCTCGAAGATGGCAGAACTCTTGCCGATTACA 2305 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | ||||| || || || || | ||||| || || Sbjct 2306 ATATTCAGAAGGAGTCGACCCTTCATCTTGTGCT 2339 >seq1864 Length=9564 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATT--AGAATCAA 26826 ||||| | ||||| || ||||||||||| ||| | || || | || | ||| | | Sbjct 3376 ATGCAGATCTTTGTCAAGACATTAACTGGGAAAACCATAACTCTGGAGGTTGAGAGTTCA 3317 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 |||||||| || | || || ||||||| |||||||||||||| ||||| |||| Sbjct 3316 --GACACCATTGATAATGTTAAGGCAAAGATTCAAGACAAAGAAGGGATTCCTCCAGATC 3259 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 | || || | || | || || || || |||||||||| |||| | |||||||| Sbjct 3258 AGCAGCGATTGATCTTCGCTGGTAAGCAGCTCGAAGATGGCAGAACTCTTGCCGACTATA 3199 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||| || || || || | ||||| || || Sbjct 3198 ACATTCAGAAGGAGTCGACCCTTCATCTTGTGCT 3165 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATT--AGAATCAA 26826 ||||| | ||||| || || || |||||||| | ||||| | || | ||| | | Sbjct 3604 ATGCAGATATTTGTGAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGAGTTCA 3545 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 ||||||||||| | || || ||||||| ||||| ||||| || ||||| |||| Sbjct 3544 --GACACCATCGATAATGTGAAGGCAAAGATTCAAGACAAGGAAGGTATCCCTCCGGATC 3487 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 | |||||| | || | | |||||||| || || |||| |||| | ||||| | Sbjct 3486 AGCAAAGATTGATCTTTGCAGGCAAACAGCTTGAGGATGGCAGAACACTGGCGGACTACA 3427 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | |||||||| || || || ||||||| || ||| || | ||||| || Sbjct 3426 ATATTCAAAAGGAGTCGACCCTCCATCTCGTGCTGCGATTGAGAGGTGG 3378 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA---TC 26824 |||||| | || || || || || |||||||| | || || | ||| ||||| || Sbjct 4061 AATGCAGATTTTCGTGAAGACCTTGACTGGAAAGACCATAACTTTGGAAGTAGAAAGCTC 4002 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | ||||||||||| | || ||| ||||| ||||| |||||||| ||||| || Sbjct 4001 A---GACACCATCGACAATGTGAAAGCCAAGATACAGGACAAGGAAGGGATCCCTCCAGA 3945 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || |||||| | |||| | ||||| || |||||||||| || | | || || Sbjct 3944 CCAGCAAAGATTGATTTTTGCTGGCAAGCAGCTCGAAGATGGCAGGACACTGGCTGATTA 3885 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || || || ||||| || ||| ||||||| || ||| Sbjct 3884 CAATATCCAGAAAGAGTCGACTCTCCATCTTGTGCTG 3848 Score = 89.7 bits (98), Expect = 5e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||| ||||| || ||||| ||||| Sbjct 4228 GACACTATTGACGATGTCAAAGCTAAGATTCAAGACAAGGAAGGAATTCCTCCAGATCAG 4169 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || |||| | || |||||||||||||||| | | | | | ||||| || Sbjct 4168 CAGAGGCTAATTTTTGCTGGAAAACAACTCGAAGATGGTCGTACCCTTGCTGACTACAAT 4109 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || ||||| || || || ||||||| ||||| | ||| | || |||| Sbjct 4108 ATCCAAAAGGAGTCCACCCTCCATCTTGTCCTCCGCCTTCGTGGTGGAA 4060 >seq38014 Length=3548 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| ||||||| || ||||||| | ||| | || | Sbjct 1209 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTCC 1150 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || ||||| || || ||||| || ||||||||||| Sbjct 1149 GACACGATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAAGGAATCCCTCCCGATCAG 1090 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG-ACTATAA 26947 || || || |||| | ||||| || || ||||||| || | | | ||| |||| || Sbjct 1089 CAGAGGCTGATTTTTGCAGGCAAGCAGCTGGAAGATGGAAGGA-CTTTGGCGGACTACAA 1031 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 ||||||||| || || || | ||| |||| ||||| || Sbjct 1030 CATTCAAAAGGAGTCGACATTGCATTTGGTGCTGAGGCT 992 >seq169900 Length=516 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| |||| |||||| | |||||| ||||| | ||| | Sbjct 431 ATGCAAATCTTCGTTAAAACCCTAACCGGAAAAACCATCACCCTCGAAGTCGAAAGCTCC 372 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || || || ||| ||||||||||| || || || || ||| Sbjct 371 GATACTATTGATAACGTGAAGGCCAAAATTCAAGACAAAGAAGGCATCCCCCCTGACCAA 312 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | || ||| || || || ||||||| | | | ||||| ||| Sbjct 311 CAACGTCTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTGCTGACTACAAC 252 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||||||| || ||| | || |||| || Sbjct 251 ATTCAAAAAGAGTCAACTCTTCACTTGGTGCT 220 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || ||||||||||| | ||||| | ||| | ||| | Sbjct 203 ATGCAGATATTCGTCAAGACCCTAACTGGAAAAACCATCACTCTTGAAGTGGAAAGCTCC 144 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || || ||| |||||||||||||| || || || || Sbjct 143 GACACTATCGACAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATCCCGCCTGACCAG 84 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | | || ||||| |||||||||| | | | | ||||||||| Sbjct 83 CAGCGCCTCATCTTTGCTGGTAAACAGCTCGAAGATGGTCGTACTCTTGCTGACTATAAC 24 Query 26949 ATTCAAAAAGAATCTACT 26966 || |||||||| || ||| Sbjct 23 ATCCAAAAAGAGTCAACT 6 >seq48530 Length=6115 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA-ATCAAA 26827 ||||| | ||||| || || |||||||| || | || || | || | || | | | Sbjct 3512 ATGCAGATCTTTGTGAAGACCTTAACTGGGAAGACCATAACACTGGAGGTTGAGAGCTCA 3453 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||| | || || ||||||| ||||| ||||| || ||||| ||||| Sbjct 3452 -GACACCATCGATAATGTGAAGGCAAAGATTCAAGACAAGGAAGGTATCCCTCCGGATCA 3394 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||||| | || | | ||||| || || ||||||| |||| | |||||| || Sbjct 3393 GCAAAGATTGATCTTTGCAGGCAAGCAGCTTGAAGATGGCAGAACTCTTGCCGACTACAA 3334 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 ||||| || || || || ||||||| || || | || | |||||| Sbjct 3333 TATTCAGAAGGAGTCGACCCTCCATCTTGTGCTTCGCCTGCGTGGAGGA 3285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477520335446720