Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq87019 168 2e-36 seq33760 98.7 3e-15 seq130793 87.8 5e-12 >seq87019 Length=1933 Score = 168 bits (186), Expect = 2e-36 Identities = 430/649 (66%), Gaps = 4/649 (1%) Strand=Plus/Minus Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 ||||| || ||| | ||||| || ||| | ||| || || ||||| | || || Sbjct 1932 GACACTCTAAAGGAATGTGCAGAAATAAGCAAAACTGCGGGTGGTATTGGATTGTCTATT 1873 Query 363712 CACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCT 363770 |||||| | || ||| | ||| |||||| | || || || ||| || ||||| | Sbjct 1872 CACAATATACGAGCAATGGGCAGCTACATTAGGGGAACTAATGG-TACATCCAATGGCAT 1814 Query 363771 GGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAA 363830 ||||| ||||| | ||||| | | || || | ||||| || ||||||||||| || Sbjct 1813 AGTTCCGATGCTGAGGGTGTTCAATGACACAGCTCGATACGTAGATCAGGGTGGAGGCAA 1754 Query 363831 GCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCT 363890 | || || || |||||||| ||| | ||||| ||||| ||||| ||||| | || Sbjct 1753 AAGAAAGGGTGCTTTTGCTATTTATTTGGAGCCATGGCATGCAGATATATTTGATTGGCT 1694 Query 363891 TGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACT 363950 || | |||| || ||||| || || | || || ||| ||||||| | || Sbjct 1693 AGACTTGAGGAAGAATCATGGAAAGGAAGAGAACAGAGCTCGAGATTTGTTCTACGGCCT 1634 Query 363951 TTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTG 364010 |||| | | || || |||||||| ||| | | | | ||||||| || ||||| Sbjct 1633 TTGGATCCCAGATTTGTTCATGAAGCGTGTGCAAGAGAATGGGGATTGGTCCCTGTTTTG 1574 Query 364011 CCCACACGAATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTATACG 364069 ||| | || || || ||| | || ||| |||||||| | | || | ||| Sbjct 1573 CCCTAATGAGGCCCCTGGCCTTGCTGACTGT-TGGGGTGAAAAGTTTGAGAAGTTGTACA 1515 Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTG 364129 | ||||| || |||||||| || | | || ||||||||||| ||||||| Sbjct 1514 CAGGCTATGAGTCTGAGGGAAAATCTAGGAGTGTTGTTAAAGCACAGAAGCTGTGGTTTG 1455 Query 364130 CCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCA 364189 | || |||| | |||||||| ||||| | ||||| ||| | ||||| ||||| || | Sbjct 1454 CTATTTTGGAAGCCCAGATTGAAACAGGCAATCCCTACATGCTCTACAAGGATTCCTGTA 1395 Query 364190 ACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGA 364249 || | ||| || ||||| ||||||| || || || || ||||| || |||| Sbjct 1394 ACAGAAAGAGTAATCAGCAAAACCTTGGAACTATCAAGTCTTCTAATCTATGCACAGAGA 1335 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 | || |||| ||| ||| || || || || || || || || || || Sbjct 1334 TCATCGAATTCACAAGTCCAGAGGAAACAGCTGTCTGCAATCTCGCTTC 1286 >seq33760 Length=8815 Score = 98.7 bits (108), Expect = 3e-15 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||||||| || || || || || | ||| ||||||||| | |||||| ||||| | Sbjct 3154 ATGAAGGATGACAGTATTGAAGGCATATATGATACACTTAAGGAATGTGCTGTTATTAGC 3213 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACAT 363740 || || || || |||||||| |||||||||||| | |||| ||||| | ||||| || Sbjct 3214 AAATCAGCTGGAGGTATTGGTGTGTCGATCCACAATATACGTGCCACAGGA-AGTTATAT 3272 Query 363741 TCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799 || || || | |||| | || ||||| | || || |||||||| || || | | | Sbjct 3273 ACGTGGAACGAATGGGACA-TCCAATGGCATTGTCCCAATGCTTCGAGTTTTCAATGACA 3331 Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831 | || | || || || |||||||| || ||| Sbjct 3332 CAGCTCGATATGTGGATCAGGGTGGTGGCAAG 3363 >seq130793 Length=2729 Score = 87.8 bits (96), Expect = 5e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 111702 CAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATT 111761 |||||||||||| | | || | | || ||||| |||||||| || ||||||||||| Sbjct 819 CAGTTTTATGTAGCCAATGGTGAGTTATCTTGCCAGATGTATCAACGTTCTGCTGATATG 760 Query 111762 GGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCAT 111821 ||||| || || || |||||||| ||| || || || ||||| ||| | || |||||| Sbjct 759 GGTCTCGGAGTGCCATTTAATATCGCATCATATGCTCTGCTTACATGCATGATTGCTCAT 700 Query 111822 TTT 111824 || Sbjct 699 GTT 697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300166120065032