Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq156471 111 1e-19 seq38015 96.9 3e-15 seq169900 95.1 1e-14 seq63669 93.3 4e-14 seq38014 93.3 4e-14 seq55212 91.5 1e-13 seq53616 89.7 4e-13 seq119584 87.8 2e-12 seq76882 86.0 5e-12 >seq156471 Length=3476 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || || | ||||| || ||||| || | || ||| | | Sbjct 1900 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 1959 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || | |||| || || |||||| || || ||||| |||| ||||| Sbjct 1960 GACACAGTCG-ACAATGTGAAGGCAAAAATCCAAGACAAGGAAGGTATCCCTCCGGATCA 2018 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | |||| ||| ||||||||| | || |||| || ||| |||| ||||| || Sbjct 2019 GCAAAGATTGATTTTTGCAGGCAAACAACTCGAGGATGGCAGAACACTGGCGGATTACAA 2078 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| |||||||| || || | ||| | ||| || ||||| |||| || Sbjct 2079 CATACAAAAAGAATCGACCCTTCATCTTGTGCTGCGATTGAGAGGTGG 2126 >seq38015 Length=2403 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || |||||||| || || || || || || || | ||| ||| | | Sbjct 2399 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTCC 2340 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | |||| || || || ||| ||||||||||| |||| ||||| Sbjct 2339 GACACAATCG-ACAATGTGAAGGCGAAGATTCAGGATAAAGAAGGAATCCCTCCCGATCA 2281 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || || |||| ||| |||||||| | ||||||| | || |||| || || || Sbjct 2280 GCAGAGGCTGATTTTTGCAGGCAAACAGCTGGAAGATGGAAGGACATTGGCGGACTACAA 2221 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||| || ||||| || | ||| |||| |||| |||| || |||| Sbjct 2220 CATTCAGAAGGAGTCGACATTGCATTTGGTTCTGAGGCTGCGCGGGGGAA 2171 >seq169900 Length=516 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || || ||||| || || ||||||||||| ||| ||||| || | | Sbjct 431 ATGCAAATCTTCGTTAAAACCCTAACCGGAAAAACCATCACCCTCGAAGTCGAAAGCTCC 372 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | || || |||||| || ||||||||| ||||| ||| || Sbjct 371 GATACTATTGATAACGTGAAGGCCAAAATTCAAGACAAAGAAGGCATCCCCCCTGACCAA 312 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | || || | || || || || | ||||||| | || | || || || ||| Sbjct 311 CAACGTCTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTGCTGACTACAAC 252 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||||||||||||| ||| | || ||||| Sbjct 251 ATTCAAAAAGAGTCAACTCTTCACTTGGTG 222 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || ||||| || || || ||||||||||| || | ||| ||| | | Sbjct 203 ATGCAGATATTCGTCAAGACCCTAACTGGAAAAACCATCACTCTTGAAGTGGAAAGCTCC 144 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | |||| || || |||||| || |||||||| |||| ||| || Sbjct 143 GACACTATCG-ACAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATCCCGCCTGACCA 85 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | || || | ||| || ||||| | ||||||| || | || || ||||| Sbjct 84 GCAGCGCCTCATCTTTGCTGGTAAACAGCTCGAAGATGGTCGTACTCTTGCTGACTATAA 25 Query 115465 CATTCAAAAAGAGTCTACT 115483 ||| ||||||||||| ||| Sbjct 24 CATCCAAAAAGAGTCAACT 6 >seq63669 Length=360 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343 ||||| || || || ||||| || || ||||||||||| ||| ||||| || || | Sbjct 104 ATGCAGATCTTCGTGAAAACCCTAACTGGAAAAACCATCACCCTCGAAGTTGAAAGTTCG 163 Query 115344 GCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | | ||| ||| |||| ||||| ||||||| ||||| ||||| ||||| ||| Sbjct 164 G--ATACTATTG-ACAATGTAAAGGCAAAAATTCAAGATAAGGAAGGAATCCCCCCAGAT 220 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 |||||| | || || | ||| || || || | ||||| | | || | || || || Sbjct 221 CAGCAACGTCTCATCTTTGCCGGAAAGCAGCTTGAAGACGGCCGTACTCTTGCTGACTAC 280 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||||||||||||||| || | || ||||| Sbjct 281 AACATTCAAAAAGAGTCAACCCTTCACTTGGTG 313 >seq38014 Length=3548 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || |||||||| || || || || || || || | ||| ||| | | Sbjct 1209 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTCC 1150 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | ||||| || || || || ||||| ||||| |||| ||||| Sbjct 1149 GACAC-GATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAAGGAATCCCTCCCGATCA 1091 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || || |||| ||| ||||| || | ||||||| | || |||| || || || Sbjct 1090 GCAGAGGCTGATTTTTGCAGGCAAGCAGCTGGAAGATGGAAGGACTTTGGCGGACTACAA 1031 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| ||||| || | ||| ||||| |||| |||| || || Sbjct 1030 CATTCAAAAGGAGTCGACATTGCATTTGGTGCTGAGGCTGCGCGGCGG 983 >seq55212 Length=5247 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| ||||||||||| ||||||||||| ||| | ||| ||| | Sbjct 2756 AATGCAAATTTTTGTGAAAACGCTCACCGGAAAAACCATCACCCTTGAAGTTGAGAGCTC 2815 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 || || | ||||| || || || ||| || || |||||| |||| ||| | Sbjct 2816 GGATAC-CATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACC 2874 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| | | || | ||| || || ||| | || || | |||| | || ||||| | Sbjct 2875 AGCAGCGTTTGATCTTTGCTGGGAAGCAACTCGAGGACGGTCGAACCCTAGCTGATTACA 2934 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | || || || || || || ||||| |||| ||||| ||| |||| || Sbjct 2935 ATATCCAGAAGGAATCGACCCTACATCTGGTTTTGAGGTTGAGAGGTGG 2983 >seq53616 Length=2978 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || |||||||| || || || || || || || | ||| ||| | | Sbjct 1525 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTCC 1584 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | ||||| || || || ||| ||||| ||||| |||| ||||| Sbjct 1585 GACAC-GATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAAGGAATCCCTCCCGATCA 1643 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| ||||| |||| || ||||| || | ||||||| | || |||| || || || Sbjct 1644 GCAGAGACTGATTTTCGCAGGCAAGCAGCTGGAAGATGGAAGGACTTTGGCGGACTACAA 1703 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| ||||| || | ||| |||| | || |||| || || Sbjct 1704 CATTCAAAAGGAGTCGACATTGCATTTGGTTCTCAGGCTGCGCGGCGG 1751 >seq119584 Length=3068 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||||||||| |||| ||| ||||| || || || | ||| || |||||||| ||| Sbjct 2250 GATAAAGAAGGAATCCCTCCTGACCAGCAGAGGCTGATATTTGCTGGTAAACAATTGGAA 2309 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| || ||| |||| ||||| || || |||||||| || ||| | || | || ||| Sbjct 2310 GATGGCAGAACTTTGGCGGATTACAATATCCAAAAAGAATCAACTCTTCACCTTGTTTTG 2369 Query 115499 AGATTGCGAGGAGGAA 115514 || | | ||||||| Sbjct 2370 AGGCTCAGGGGAGGAA 2385 >seq76882 Length=309 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||||||||| ||||| || ||||| || ||| ||||| || | Sbjct 121 ATGCAGATCTTTGTCAAAACCCTCACCGGGAAAACAATCACCCTCGAAGTCGAAAGCTCT 180 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| || ||||| || || ||||||| || ||||||||| |||| ||| || Sbjct 181 GACACTATT-GACAACGTCAAGGCAAAAATTCAAGACAAAGAAGGCATCCCTCCTGACCA 239 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||| | ||| || ||||| | ||||||| || | || || || || Sbjct 240 GCAGCGCCTTATATTTGCCGGAAAACAGCTCGAAGATGGGCGCACTCTTGCTGACTACAA 299 Query 115465 CATTCAAAA 115473 |||||| || Sbjct 300 CATTCAGAA 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424354521721120