Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq156471 111 1e-19
seq38015 96.9 3e-15
seq169900 95.1 1e-14
seq63669 93.3 4e-14
seq38014 93.3 4e-14
seq55212 91.5 1e-13
seq53616 89.7 4e-13
seq119584 87.8 2e-12
seq76882 86.0 5e-12
>seq156471
Length=3476
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| |||||||| || || | ||||| || ||||| || | || ||| | |
Sbjct 1900 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 1959
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| || | |||| || || |||||| || || ||||| |||| |||||
Sbjct 1960 GACACAGTCG-ACAATGTGAAGGCAAAAATCCAAGACAAGGAAGGTATCCCTCCGGATCA 2018
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||||||| | |||| ||| ||||||||| | || |||| || ||| |||| ||||| ||
Sbjct 2019 GCAAAGATTGATTTTTGCAGGCAAACAACTCGAGGATGGCAGAACACTGGCGGATTACAA 2078
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| |||||||| || || | ||| | ||| || ||||| |||| ||
Sbjct 2079 CATACAAAAAGAATCGACCCTTCATCTTGTGCTGCGATTGAGAGGTGG 2126
>seq38015
Length=2403
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||| || |||||||| || || || || || || || | ||| ||| | |
Sbjct 2399 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTCC 2340
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | |||| || || || ||| ||||||||||| |||| |||||
Sbjct 2339 GACACAATCG-ACAATGTGAAGGCGAAGATTCAGGATAAAGAAGGAATCCCTCCCGATCA 2281
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| || || |||| ||| |||||||| | ||||||| | || |||| || || ||
Sbjct 2280 GCAGAGGCTGATTTTTGCAGGCAAACAGCTGGAAGATGGAAGGACATTGGCGGACTACAA 2221
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
|||||| || ||||| || | ||| |||| |||| |||| || ||||
Sbjct 2220 CATTCAGAAGGAGTCGACATTGCATTTGGTTCTGAGGCTGCGCGGGGGAA 2171
>seq169900
Length=516
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||| || || ||||| || || ||||||||||| ||| ||||| || | |
Sbjct 431 ATGCAAATCTTCGTTAAAACCCTAACCGGAAAAACCATCACCCTCGAAGTCGAAAGCTCC 372
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| ||| ||| | || || |||||| || ||||||||| ||||| ||| ||
Sbjct 371 GATACTATTGATAACGTGAAGGCCAAAATTCAAGACAAAGAAGGCATCCCCCCTGACCAA 312
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | || || | || || || || | ||||||| | || | || || || |||
Sbjct 311 CAACGTCTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTGCTGACTACAAC 252
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495
|||||||||||||| ||| | || |||||
Sbjct 251 ATTCAAAAAGAGTCAACTCTTCACTTGGTG 222
Score = 82.4 bits (90), Expect = 6e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || || ||||| || || || ||||||||||| || | ||| ||| | |
Sbjct 203 ATGCAGATATTCGTCAAGACCCTAACTGGAAAAACCATCACTCTTGAAGTGGAAAGCTCC 144
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| | | |||| || || |||||| || |||||||| |||| ||| ||
Sbjct 143 GACACTATCG-ACAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATCCCGCCTGACCA 85
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| | || || | ||| || ||||| | ||||||| || | || || |||||
Sbjct 84 GCAGCGCCTCATCTTTGCTGGTAAACAGCTCGAAGATGGTCGTACTCTTGCTGACTATAA 25
Query 115465 CATTCAAAAAGAGTCTACT 115483
||| ||||||||||| |||
Sbjct 24 CATCCAAAAAGAGTCAACT 6
>seq63669
Length=360
Score = 93.3 bits (102), Expect = 4e-14
Identities = 151/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA--GTCCA 115343
||||| || || || ||||| || || ||||||||||| ||| ||||| || || |
Sbjct 104 ATGCAGATCTTCGTGAAAACCCTAACTGGAAAAACCATCACCCTCGAAGTTGAAAGTTCG 163
Query 115344 GCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
| | ||| ||| |||| ||||| ||||||| ||||| ||||| ||||| |||
Sbjct 164 G--ATACTATTG-ACAATGTAAAGGCAAAAATTCAAGATAAGGAAGGAATCCCCCCAGAT 220
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
|||||| | || || | ||| || || || | ||||| | | || | || || ||
Sbjct 221 CAGCAACGTCTCATCTTTGCCGGAAAGCAGCTTGAAGACGGCCGTACTCTTGCTGACTAC 280
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTG 115495
||||||||||||||||| || | || |||||
Sbjct 281 AACATTCAAAAAGAGTCAACCCTTCACTTGGTG 313
>seq38014
Length=3548
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||| || |||||||| || || || || || || || | ||| ||| | |
Sbjct 1209 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTCC 1150
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | ||||| || || || || ||||| ||||| |||| |||||
Sbjct 1149 GACAC-GATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAAGGAATCCCTCCCGATCA 1091
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| || || |||| ||| ||||| || | ||||||| | || |||| || || ||
Sbjct 1090 GCAGAGGCTGATTTTTGCAGGCAAGCAGCTGGAAGATGGAAGGACTTTGGCGGACTACAA 1031
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||| ||||| || | ||| ||||| |||| |||| || ||
Sbjct 1030 CATTCAAAAGGAGTCGACATTGCATTTGGTGCTGAGGCTGCGCGGCGG 983
>seq55212
Length=5247
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
||||||||||||||| ||||||||||| ||||||||||| ||| | ||| ||| |
Sbjct 2756 AATGCAAATTTTTGTGAAAACGCTCACCGGAAAAACCATCACCCTTGAAGTTGAGAGCTC 2815
Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
|| || | ||||| || || || ||| || || |||||| |||| ||| |
Sbjct 2816 GGATAC-CATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACC 2874
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||| | | || | ||| || || ||| | || || | |||| | || ||||| |
Sbjct 2875 AGCAGCGTTTGATCTTTGCTGGGAAGCAACTCGAGGACGGTCGAACCCTAGCTGATTACA 2934
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
| || || || || || || ||||| |||| ||||| ||| |||| ||
Sbjct 2935 ATATCCAGAAGGAATCGACCCTACATCTGGTTTTGAGGTTGAGAGGTGG 2983
>seq53616
Length=2978
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||| || |||||||| || || || || || || || | ||| ||| | |
Sbjct 1525 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTCC 1584
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | ||||| || || || ||| ||||| ||||| |||| |||||
Sbjct 1585 GACAC-GATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAAGGAATCCCTCCCGATCA 1643
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| ||||| |||| || ||||| || | ||||||| | || |||| || || ||
Sbjct 1644 GCAGAGACTGATTTTCGCAGGCAAGCAGCTGGAAGATGGAAGGACTTTGGCGGACTACAA 1703
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||| ||||| || | ||| |||| | || |||| || ||
Sbjct 1704 CATTCAAAAGGAGTCGACATTGCATTTGGTTCTCAGGCTGCGCGGCGG 1751
>seq119584
Length=3068
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||||||||| |||| ||| ||||| || || || | ||| || |||||||| |||
Sbjct 2250 GATAAAGAAGGAATCCCTCCTGACCAGCAGAGGCTGATATTTGCTGGTAAACAATTGGAA 2309
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||| || ||| |||| ||||| || || |||||||| || ||| | || | || |||
Sbjct 2310 GATGGCAGAACTTTGGCGGATTACAATATCCAAAAAGAATCAACTCTTCACCTTGTTTTG 2369
Query 115499 AGATTGCGAGGAGGAA 115514
|| | | |||||||
Sbjct 2370 AGGCTCAGGGGAGGAA 2385
>seq76882
Length=309
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||||||||| ||||| || ||||| || ||| ||||| || |
Sbjct 121 ATGCAGATCTTTGTCAAAACCCTCACCGGGAAAACAATCACCCTCGAAGTCGAAAGCTCT 180
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| || ||||| || || ||||||| || ||||||||| |||| ||| ||
Sbjct 181 GACACTATT-GACAACGTCAAGGCAAAAATTCAAGACAAAGAAGGCATCCCTCCTGACCA 239
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| | ||||| | ||| || ||||| | ||||||| || | || || || ||
Sbjct 240 GCAGCGCCTTATATTTGCCGGAAAACAGCTCGAAGATGGGCGCACTCTTGCTGACTACAA 299
Query 115465 CATTCAAAA 115473
|||||| ||
Sbjct 300 CATTCAGAA 308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424354521721120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |