Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq156471 89.7 4e-13 seq169900 86.0 5e-12 >seq156471 Length=3476 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| |||||||| || || |||| || || ||||| || |||| || | | Sbjct 1900 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 1959 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | || | | | || || |||||| ||||| ||||| | || ||||| Sbjct 1960 GACACAGTCGACAATGTGAAGGCAAAAATCCAAGACAAGGAAGGTATCCCTCCGGATCAG 2019 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||| | |||| ||| ||||||||| | || ||| | ||| |||| ||||| || Sbjct 2020 CAAAGATTGATTTTTGCAGGCAAACAACTCGAGGATGGCAGAACACTGGCGGATTACAAC 2079 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 |||||||||||||| || || ||| | ||| |||| || | ||||| Sbjct 2080 ATACAAAAAGAATCGACCCTTCATCTTGTGCTGCGATTGAGAGGTGG 2126 >seq169900 Length=516 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| || || ||||| | ||||| |||||||| ||| | ||| ||| | | Sbjct 431 ATGCAAATCTTCGTTAAAACCCTAACCGGAAAAACCATCACCCTCGAAGTCGAAAGCTCC 372 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | || || |||||| |||||||||||| | ||| || ||| Sbjct 371 GATACTATTGATAACGTGAAGGCCAAAATTCAAGACAAAGAAGGCATCCCCCCTGACCAA 312 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || || | || || || || | |||||| ||| | || || || || Sbjct 311 CAACGTCTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTTGCTGACTACAAC 252 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || |||||||| || || || || || ||| | ||||| || ||||| Sbjct 251 ATTCAAAAAGAGTCAACTCTTCACTTGGTGCTCCGTCTCCGTGGTGG 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422055881519200