Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq42153 107 2e-18 seq26386 93.3 5e-14 >seq42153 Length=9390 Score = 107 bits (118), Expect = 2e-18 Identities = 146/203 (72%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 126077 GAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAA 126136 ||||| | ||||||||| || ||| || ||||||||||| |||||||||| ||| ||| Sbjct 4883 GAGATCAATTCATTCGAAAACGTCAGCCCAGGCATGAGACCGCGCTTCTTCAGCCAAAAA 4942 Query 126137 ATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGC 126196 || || || || || ||||||||||| || || || |||||||| |||| | | | Sbjct 4943 ATGGCGCAGAAGCTCCCGGAGAAGAAGATCCCTTCAACGCACGCGAAGGCAACCAACCTC 5002 Query 126197 TCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCG 126256 || || || | ||| | ||| | ||| ||| |||||| |||||| ||||| Sbjct 5003 TCCGCGAACGTCTCCGA---TCCGTCGATCCAGCTCAGCGCCCAGCTCGCCTTCCTCTCG 5059 Query 126257 ATACACGGGACGGTCTGGATCGC 126279 | || |||| ||| | |||||| Sbjct 5060 ACGCAAGGGATGGTGTCGATCGC 5082 >seq26386 Length=13841 Score = 93.3 bits (102), Expect = 5e-14 Identities = 283/432 (66%), Gaps = 14/432 (3%) Strand=Plus/Plus Query 10820 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCA--- 10876 ||||| | |||| | ||||||||| || | || | | ||||| |||| | Sbjct 1659 TCAAGAACATCAGGCCTGTTCGTCGCAGCCAACACTATAACGCCCGA---GTTACCGGTG 1715 Query 10877 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGC 10936 || |||||||| ||||||||||| ||||| || || || || | ||||||||| | | Sbjct 1716 AATCCATCCATTTCAGTCAAGAGCTGATTAATAGTCTGCTCTCTCTCATCATTCCCA--C 1773 Query 10937 ATACCACCC--GCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATAC 10994 | ||| || || | | ||| | || || || ||||| ||||| ||||| || || | Sbjct 1774 CTCCCATCCCAGCCCCTCTCTGCCTCCCCACAGCATCAATCTCATCAATGAACACAATGC 1833 Query 10995 ACGGTTGATTTTCACGGGCAACTTCA--AAGATATCTCGGACTCTCTTGGCACCGACACC 11052 | ||| |||| | | |||| || | ||| | |||||| || || || || Sbjct 1834 AAGGTGC--TTTCGCCTTCGCCTTCTCGAACAAATCCCTCACTCTCGAAGCTCCCACTCC 1891 Query 11053 CACAAACATTTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACC 11112 ||| |||| ||||| || | | || | |||| || ||| || || || ||| || Sbjct 1892 CACGAACAGCTCCACGAACTCCGAAGCTGCACATGAGAAGAACGGCACCCCGGCTTCTCC 1951 Query 11113 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACC 11172 || | || | || | |||||||||||||| |||||| || | | |||| ||| Sbjct 1952 GGCCACCGCCCTAGCCAATAGGGTCTTCCCCGTGCCAGGTGGACCCACCAAAAGGCAACC 2011 Query 11173 ACGTGGGATCCTGGCACCACTTCCAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGAT 11232 |||||| | ||||| | || ||| || || | ||| | ||| ||||| | Sbjct 2012 TTTAGGGATCTTTGCACCCAATGCAGTGTATTTATCTGGGTTTTTCAAGAAATCCACCAC 2071 Query 11233 TTCTTCCAATTC 11244 ||||| ||| || Sbjct 2072 TTCTTGCAACTC 2083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595928344178080