Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq55212 125 5e-24 seq104136 118 8e-22 seq63669 100 2e-16 seq156471 98.7 7e-16 seq21302 95.1 9e-15 seq162968 93.3 3e-14 seq1864 93.3 3e-14 seq26240 87.8 1e-12 seq53616 82.4 5e-11 >seq55212 Length=5247 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||||| ||| || ||||| | ||| ||||| || || || || || |||||||| ||| Sbjct 2983 CCACCTCTCAACCTCAAAACCAGATGTAGGGTCGATTCCTTCTGGATATTGTAATCAGCT 2924 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || ||| |||| || | ||| || ||||| | ||||||||||| ||||| || Sbjct 2923 -AGGGTTCGACCGTCCTCGAGTTGCTTCCCAGCAAAGATCAAACGCTGCTGGTCAGGAGG 2865 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| ||| || ||| | || || ||||| | || || Sbjct 2864 GATGCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTATCCGAGCTCTCAAC 2805 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| |||||||| || || || ||||| |||||||||||||| Sbjct 2804 TTCAAGGGTGATGGTTTTTCCGGTGAGCGTTTTCACAAAAATTTGCAT 2757 Score = 123 bits (136), Expect = 2e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||||| ||| || ||||| | |||||| || || || || || || |||||||| ||| Sbjct 3464 CCACCTCTCAACCTCAAAACCAGATGAAGAGTCGACTCCTTCTGAATATTGTAATCAGCT 3405 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | ||| | ||||||| || || ||||| | ||||| ||||||||||| || Sbjct 3404 -AGCGTCCTCCCATCTTCTAGCTGCTTCCCAGCAAAGATCAAGCGCTGTTGGTCCGGAGG 3346 Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||||||||||| || ||| ||||| || ||| | || || || || | |||| | Sbjct 3345 AATTCCTTCCTTATCCTGAATCTTTGC-CTTGACATTGTCAATCGTGTCTGAACTTTCAA 3287 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | |||||||| || || || ||||| || || ||||| ||||| Sbjct 3286 CTTCGAGTGTAATGGTCTTTCCAGTAAGAGTCTTCACGAAAATCTGCAT 3238 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || || || || |||||||| || | | | ||||| | |||| Sbjct 3668 TGAAGGGTGGATTCCTTCTGGATATTGTAATCTGCCAGGGTGCGACCATCTTCGAGTTGT 3609 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 || ||||| | ||||||||||| || || |||||| |||||||| || ||| ||| Sbjct 3608 TTCCCAGCAAAGATCAAACGCTGCTGATCCGGTGGAATCCCTTCCTTATCCTGAATCTTT 3549 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || || ||| | ||||| ||||| | | || || || || || ||||| || ||||| Sbjct 3548 GC-CTTCACATTATCTATTGTATCCGAACTCTCCACCTCCAAAGTGATGGTCTTCCCTGT 3490 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| || ||||| Sbjct 3489 TAGAGTCTTGACAAAGATCTGCAT 3466 >seq104136 Length=768 Score = 118 bits (130), Expect = 8e-22 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| ||||| || ||||| || |||||||| || | | | || || |||||| Sbjct 590 TGAAGAGTAGACTCCTTTTGGATATTGTAATCCGCAAGGGTGCAACCATCCTCCAATTGT 531 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 || || | |||||| |||||| ||||| |||| |||||||||||| ||| ||| Sbjct 530 TTCCCGGAAAATATCAGACGCTGCTGGTCAGGACGAATCCCTTCCTTGTCATTAATCTTT 471 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || ||||||| | || || ||||| |||| || || | ||||||||| ||||| || Sbjct 470 GC-TTTTACATTCTCAATTGTATCAGAGCTTTCAACTTCCAGGGTAATGGTCTTACCAGT 412 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| ||||| |||||||| Sbjct 411 GAGGGTTTTGACAAAGATTTGCAT 388 >seq63669 Length=360 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || |||||||| || |||||||| |||||||| || ||| | | ||||||| Sbjct 312 ACCAAGTGAAGGGTTGACTCTTTTTGAATGTTGTAGTCAGCAAGAGTACGGCCGTCTTCA 253 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || || || | || | ||| || || || || ||||||||||| || | Sbjct 252 AGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGGGGGATTCCTTCCTTATCTTGA 193 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| |||||| | || |||||||| | |||| || || | ||| |||||||| Sbjct 192 ATTTTTGCCTTTACATTGTCAATAGTATCCGAACTTTCAACTTCGAGGGTGATGGTTTTT 133 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || || || |||||| Sbjct 132 CCAGTTAGGGTTTTCACGAAGATCTGCATA 103 >seq156471 Length=3476 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||| | || | ||||||||| || |||||||||||||||||||| Sbjct 2126 CCACCTCTCAATCGCAGCACAAGATGAAGGGTCGATTCTTTTTGTATGTTGTAATCCGCC 2067 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | || || | ||||||||| || | ||||| | || || || || Sbjct 2066 AGTGTTCTGCCATCCTCGAGTTGTTTGCCTGCAAAAATCAATCTTTGCTGATCCGGAGGG 2007 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||||| || ||| | || | || ||| | || || Sbjct 2006 ATACCTTCCTTGTCTTGGATTTTTGCCTTCACATTGTCGACTGTGTCGGAGCTCTCAACC 1947 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || || |||| || || |||||||| ||||| Sbjct 1946 TCCAAAGTGATGGTCTTCCCCGTCAAGGTCTTCACAAAAATCTGCAT 1900 >seq21302 Length=5313 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || || | || | ||||||||| || || ||||||||||||||||| Sbjct 4222 CCACCTCTCAGTCGCAGCACAAGATGAAGGGTCGATTCCTTTTGTATGTTGTAATCCGCC 4163 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| | ||||| | |||||||| || | ||||| | ||| || || || Sbjct 4162 AGCGTTCTGCCATCTTCAAGCTGTTTGCCTGCAAAGATCAACCTCTGCTGATCCGGAGGG 4103 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||||| || ||| | || | || ||| | || || Sbjct 4102 ATCCCTTCCTTGTCTTGTATTTTCGCCTTAACATTGTCGACTGTGTCGGAGCTCTCAACC 4043 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || || |||| || || |||||||| ||||| Sbjct 4042 TCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTCACAAAAATCTGCAT 3996 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | ||| | | || | ||| ||||| || ||||||||||| |||||||| | Sbjct 3994 CCACCCCTCAAGCGCAGCACAAGATGGAGGGTGGACTCTTTTTGTATATTGTAATCAGCG 3935 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | ||||| | || || || || | ||||| | ||| || || || Sbjct 3934 AGCGTCCTGCCATCTTCAAGCTGCTTCCCTGCAAAGATCAATCTCTGCTGATCTGGAGGG 3875 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| ||||| || ||| | || || ||||| | || || Sbjct 3874 ATCCCTTCCTTGTCTTGAATCTTTGC-CTTAACATTATCGATTGTATCTGAGCTCTCGAC 3816 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || ||||||| || || |||||||| ||||| Sbjct 3815 CTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTCACAAAAATCTGCAT 3768 >seq162968 Length=322 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/203 (70%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || ||||| ||||| || || ||| ||| | | ||||||| || Sbjct 70 TGCAGAGTGGACTCCTTTTGGATGTTATATCTGC-GAGTGTTCGCCCATCTTCTAGCTGC 128 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | || | | |||||| || ||||| ||||||||||| |||||| Sbjct 129 TTTCCAGCAAAGATTAGCCTCTGTTGATCAGGAGGAATCCCTTCCTTGTCTTGAATTTTT 188 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| || |||| || ||||| ||||||| || | |||||||| || ||||| Sbjct 189 GCTTTGACGTTTTCAATTGTATCCGAGCTTTCTACTTCAAGAGTAATGGTCTTCCCTGTT 248 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || ||||| ||||| || ||||| Sbjct 249 AGGGTTTTGACAAATATCTGCAT 271 >seq1864 Length=9564 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | | || | |||||||||||| |||||||| || |||||||| Sbjct 3606 CCACCTCTCAAGCGCAGCACGAGATGAAGGGTAGATTCTTTTTGGATATTGTAATCAGCC 3665 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | ||||| | || ||||| || | ||||| | ||| || || || Sbjct 3666 AGTGTCCTGCCATCTTCAAGCTGCTTGCCTGCAAAGATCAATCTCTGCTGATCCGGAGGG 3725 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| ||||| || ||| | || || || | | | || || Sbjct 3726 ATACCTTCCTTGTCTTGAATCTTTGC-CTTCACATTATCGATGGTGTTTGAACTCTCAAC 3784 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || ||||||| || || |||||||| ||||| Sbjct 3785 CTCCAAAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAAATCTGCAT 3832 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| ||||| || ||||| || || |||||||| || |||| | ||||| | ||| Sbjct 5214 ATGGAGGGTGGATTCTTTCTGGATATTGTAATCTGCAAGTGTTCTACCATCTTCGAGTTG 5273 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || ||||| ||||||| | ||| || || | || ||||||||||| || || Sbjct 5274 CTTCCCAGCAAATATCAATCTCTGCTGATCCGGAAGGATCCCTTCCTTGTCCTGTATCTT 5333 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || || || ||| ||| || || || || ||||| || ||||| Sbjct 5334 GGCCTTCACATTGTCAATGGTGTCGGAGCTTTTGACTTCCAAAGTGATGGTCTTTCCTGT 5393 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||| ||||| Sbjct 5394 CAAGGTCTTCACAAAAATCTGCAT 5417 >seq26240 Length=11166 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| || || || ||||||||||| || | || | || || || || Sbjct 8318 TGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCCAGGGTCCTTCCATCCTCCAACTGC 8377 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | ||||| | ||| || || ||||| || |||||||| || ||| Sbjct 8378 TTTCCAGCAAAGATCAACCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGGATCTTG 8437 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||| | ||||| || || || ||||| || ||||| Sbjct 8438 GCCTTCACATTGTCAATGGTGTCGGAGCTCTCTACCTCCAAAGTTATGGTCTTTCCTGTG 8497 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||| ||||| Sbjct 8498 AGGGTCTTGACAAAAATCTGCAT 8520 >seq53616 Length=2978 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | ||| || || || || || || || |||||||| || | | |||| || Sbjct 1278 AACGAGATGCAGCGTCGACTCCTTCTGAATATTGTAATCTGCAAGGGTCCGGCCGTCCTC 1219 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || || || ||| | |||| ||||| ||||| ||||||||||||||| || Sbjct 1218 GAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGGAATTCCTTCCTTATCCTG 1159 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| || || || | || || || ||| |||| || |||| ||| |||||||| Sbjct 1158 AATCTTCGCCTTGACGTTGTCGATCGTGTCGGAGCTTTCGACCTCTAGGGTTATGGTTTT 1099 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || || ||||| || || || |||||||| Sbjct 1098 TCCGGTTAGGGTTTTCACGAAGATCTGCATATT 1066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356560598543660