Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq26386 111 2e-19 seq42153 98.7 1e-15 seq50153 82.4 9e-11 >seq26386 Length=13841 Score = 111 bits (122), Expect = 2e-19 Identities = 289/433 (67%), Gaps = 16/433 (4%) Strand=Plus/Plus Query 12735 TCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCG--- 12791 ||||| | |||| | ||||||||| || | || | | ||||| |||| || Sbjct 1659 TCAAGAACATCAGGCCTGTTCGTCGCAGCCAACACTATAACGCCCGA---GTTACCGGTG 1715 Query 12792 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGC 12851 || |||||||| ||||||||||| ||||| || || || || | ||||||||| | | Sbjct 1716 AATCCATCCATTTCAGTCAAGAGCTGATTAATAGTCTGCTCTCTCTCATCATTCCCA--C 1773 Query 12852 ATACCACCC--GCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATAC 12909 | ||| || || | | ||| | || || || ||||| || |||||||| || || | Sbjct 1774 CTCCCATCCCAGCCCCTCTCTGCCTCCCCACAGCATCAATCTCATCAATGAACACAATGC 1833 Query 12910 ACGGTTGATTTTCACGGGCAACTTCA--AAGATATCTCGCACTCTCTTGGCACCGACACC 12967 | ||| |||| | | |||| || | ||| | ||||||| || || || || Sbjct 1834 AAGGTGC--TTTCGCCTTCGCCTTCTCGAACAAATCCCTCACTCTCGAAGCTCCCACTCC 1891 Query 12968 CACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACC 13027 ||| |||| |||||| || | | || | |||| || ||| || || || ||| || Sbjct 1892 CACGAACAGCTCCACGAACTCCGAAGCTGCACATGAGAAGAACGGCACCCCGGCTTCTCC 1951 Query 13028 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACC 13087 || | || | || | |||||||||||||| || ||| ||| | | |||| ||| Sbjct 1952 GGCCACCGCCCTAGCCAATAGGGTCTTCCCCGTGCCAGGTGGACCCACCAAAAGGCAACC 2011 Query 13088 ACGTGGGATCCTGGCACCACTTCCAAAGTAGCGCTC-GGGTTGTTTAAGAAAGTCCACGA 13146 |||||| | ||||| | || ||| || ||||| || |||||| ||||| | Sbjct 2012 TTTAGGGATCTTTGCACCCAATGCAGTGTATTTATCTGGGTTTTTCAAGAAA-TCCACCA 2070 Query 13147 TTTCTTCCAATTC 13159 ||||| ||| || Sbjct 2071 CTTCTTGCAACTC 2083 >seq42153 Length=9390 Score = 98.7 bits (108), Expect = 1e-15 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 127550 GAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAA 127609 ||||| | ||||||||| || ||| || ||||||||||| |||||||||| ||| ||| Sbjct 4883 GAGATCAATTCATTCGAAAACGTCAGCCCAGGCATGAGACCGCGCTTCTTCAGCCAAAAA 4942 Query 127610 ATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAA 127661 || || || || || |||||||||||||| || || |||||||| |||| Sbjct 4943 ATGGCGCAGAAGCTCCCGGAGAAGAAGATCCCTTCAACGCACGCGAAGGCAA 4994 >seq50153 Length=1826 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/87 (83%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCT-GTGGA 115961 || ||||||| ||||||||||||||||| |||||||| ||||||| | |||| || || Sbjct 354 TAAATGTTGGAAGTGTATGGCTCAAAGCATTCATTGTT-CCCAAGAATCTGGCTTGTTGA 296 Query 115962 GGCTGTGGGCATGGGTGCCATGAGAAG 115988 || || ||||||||||| || ||||| Sbjct 295 AGCAGTTGGCATGGGTGCAATAAGAAG 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612043402496160