Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq42153 113 7e-20 >seq42153 Length=9390 Score = 113 bits (124), Expect = 7e-20 Identities = 293/438 (67%), Gaps = 19/438 (4%) Strand=Plus/Plus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||||||||| ||||||||||| |||| || || ||||||| | |||| || | Sbjct 4578 TCTTCTCGAAGAAGTTGGTCTTCCCCTGCAAACTGATCAATTCCATCCAATCGAAAGGAT 4637 Query 159708 TCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATT 159767 ||| ||| | ||| ||||| | |||| | ||| |||||||| || || ||||||| Sbjct 4638 TCTGCACATTGTAGAGCTTCCCATATCCCAAAGCATTGAGCAACCTATCCGCTACAAATT 4697 Query 159768 CGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC--AGCCTAACGGGGAGCGCTTC 159825 | ||||| || ||| || | || ||||||| | ||| || || || || || Sbjct 4698 CAATGTACTGACTCATTAAATCCCCATTCATCCCCACCAAAGCGCAA--GGCAGAGCATC 4755 Query 159826 CGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGT--TCG 159883 ||| |||||| |||| ||||| || || || | ||| ||| | ||| | || Sbjct 4756 GCACACGAACTCCCTCTCGATCTCCACAGCATCCGCCACTATC--CCTTTCACTTTCTCC 4813 Query 159884 TACCCCGGCT---TGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGC 159940 | | | ||| | ||| | | | | |||| | ||| || || ||||||||| Sbjct 4814 TCACTCAGCTTCATCTTCAACA----GAC--TGTACAGCAAGCAAGCGAAATCGCAGTGC 4867 Query 159941 AGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGC 160000 | || || || | ||||| || || || || | | || || ||||||| || ||| Sbjct 4868 AAGCCTTCATCTCTCGAGATCAATTCATTCGAAAACGTCAGCCCAGGCATGAGACCGCGC 4927 Query 160001 GGTTTGAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACGGCCGC 160059 || ||||||||||||| |||| |||| ||| || |||||||| || ||| ||| Sbjct 4928 TTCTTCAGCCAAAAAATGG-CGCAGAAGCTCCCGGAGAAGAAGATCCCTTCAACGCACGC 4986 Query 160060 AAACGCCACGAGCCTCTC 160077 || || || | |||||| Sbjct 4987 GAAGGCAACCAACCTCTC 5004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793257999450560