Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq165807 553 2e-152 seq452 540 1e-148 seq3541 232 8e-56 seq112378 113 5e-20 seq8266 113 5e-20 >seq165807 Length=4432 Score = 553 bits (612), Expect = 2e-152 Identities = 705/971 (73%), Gaps = 0/971 (0%) Strand=Plus/Plus Query 169697 ATTGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCC 169756 ||||| |||| ||||| | ||||| | ||| |||| ||||| ||||| |||||||| | Sbjct 2963 ATTGGATAACCAGCACTGAAAACCGTCTTTATATTGGATGGTTTGGTGTTTTGATGATTC 3022 Query 169757 CATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGG 169816 | | |||| | ||| | | ||||| | |||||||| || || || || || | Sbjct 3023 CTACTTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAG 3082 Query 169817 ACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCT 169876 |||| ||||| || | |||||||| | || || | | ||||| ||||| ||||| | Sbjct 3083 ACATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTT 3142 Query 169877 CTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAG 169936 ||||||| || |||| |||| || || || | ||||| || || || ||||||| Sbjct 3143 CTGGTGCCATTATTCCTACTTCTGCGGCTATAGGGTTGCACTTTTACCCAATATGGGAAG 3202 Query 169937 CAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACT 169996 | ||| | | ||||| ||||| || ||||| ||||||||| | || || | | |||| Sbjct 3203 CGGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAGCTAATTGTTCTACACT 3262 Query 169997 TCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTA 170056 || | | || | || |||||||| | |||||||||| | |||| | |||| Sbjct 3263 TCTTACTTGGTGTAGCTTGTTACATGGGGCGTGAGTGGGAACTTAGTTTCCGTCTGGGTA 3322 Query 170057 TGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCT 170116 ||||||||||||| ||| |||||||| ||||| || | || || ||||| |||| Sbjct 3323 TGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCGGCTACTGCTGTTTTCT 3382 Query 170117 TAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTA 170176 | | ||||| ||||||| ||| ||| || || || ||||||||||| ||||| |||| Sbjct 3383 TGATTTATCCAATCGGTCAAGGAAGTTTTTCGGATGGGATGCCTCTAGGAATCTCTGGTA 3442 Query 170177 CATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATA 170236 | |||||||| ||| | |||||||| || ||||||||||| |||||||||||||| || | Sbjct 3443 CTTTTAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACA 3502 Query 170237 TGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTG 170296 || ||| || |||||| | ||||| || | || ||| || ||||| ||||| | | Sbjct 3503 TGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCTTTGG 3562 Query 170297 TAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAAT 170356 |||| ||| | | ||||| || || ||||| || || || || | || |||| || Sbjct 3563 TAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGAT 3622 Query 170357 TCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTA 170416 | || ||||| |||||||| || || || || || || ||||| || ||||| || | | Sbjct 3623 TTGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGA 3682 Query 170417 TCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCC 170476 |||||||||||||||| |||||||| |||| | | || |||||| | ||| | | | Sbjct 3683 TCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGC 3742 Query 170477 CTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATG 170536 |||||||| | |||||||| ||| | | |||||| |||| ||||| || || || |||| Sbjct 3743 CTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAATCTAAATG 3802 Query 170537 GATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAG 170596 | || || |||||||| || | || ||| | ||| ||| || ||| ||||| | Sbjct 3803 GTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTG 3862 Query 170597 ACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACT 170656 | || ||||| | || ||||| ||||||||||| |||||||| |||||||| || || | Sbjct 3863 ATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATT 3922 Query 170657 TCCCACTTGAC 170667 |||| || ||| Sbjct 3923 TCCCTCTAGAC 3933 >seq452 Length=65819 Score = 540 bits (598), Expect = 1e-148 Identities = 701/969 (72%), Gaps = 0/969 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| || || | ||||| | || |||| ||||| ||||| ||||||||||| Sbjct 10748 TGGATAACCAGTACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 10689 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| |||| ||||| || ||||| || || || Sbjct 10688 ACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGAT 10629 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | |||||||| | || || | | || || ||||| || || || Sbjct 10628 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCA 10569 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | ||||| || || || ||||||||| Sbjct 10568 GGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAATCTGGGAAGCA 10509 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || ||||||||||||||| || || || | | |||||| Sbjct 10508 GCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTC 10449 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || ||||||||| | ||||||| || | |||||| |||||| Sbjct 10448 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTTTGGGTATG 10389 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| || ||||| ||||| || |||| || |||||| ||||| Sbjct 10388 CGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTG 10329 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || || | ||||| ||| ||| || || || ||||||||||| || || ||||| Sbjct 10328 ATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACT 10269 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||||||| | |||||||| || ||||||||||| |||||||||||||| |||||| Sbjct 10268 TTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCATATG 10209 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||| ||||| | ||| Sbjct 10208 TTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 10149 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || ||||| || || || || | || |||| |||| Sbjct 10148 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 10089 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || || || || || ||||| |||||||| || | ||| Sbjct 10088 GGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTACTTTGGCCGATTGATC 10029 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || ||||| |||| | ||||||||| | ||| | | ||| Sbjct 10028 TTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCT 9969 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| ||| | | ||||| |||| ||||| || ||||| ||||| Sbjct 9968 GTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACCATGGCTTTCAACCTAAATGGT 9909 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || || |||||||| || | || ||| | || ||| || ||| ||||| || Sbjct 9908 TTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGAT 9849 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 | | ||| | || ||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct 9848 ATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 9789 Query 170659 CCACTTGAC 170667 || || ||| Sbjct 9788 CCTCTAGAC 9780 >seq3541 Length=30046 Score = 232 bits (256), Expect = 8e-56 Identities = 267/359 (74%), Gaps = 3/359 (1%) Strand=Plus/Plus Query 170172 AGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATT 170231 |||||| || ||||||||| | |||||||| || ||||||||||| |||||||||||||| Sbjct 15371 AGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATT 15430 Query 170232 CCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTC 170291 |||||| ||| || |||||| | ||||| || | || ||| || ||||| ||||| Sbjct 15431 TCATATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC 15490 Query 170292 ACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATA 170351 | ||||| ||| | | ||||| | || | || || || || || | || || Sbjct 15491 CTTGGTAACTTCTAGTTTGATCAGGGGGAAA---GAAAATGAATCTGCTAATGAAGGTTA 15547 Query 170352 CAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAG 170411 || |||||| ||||| ||| |||| || || || || || || ||||| |||||||| | Sbjct 15548 CAGATTCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATGGTTACTTTGGCCG 15607 Query 170412 ACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTAC 170471 | | ||||||||||||||||| || ||||| |||| | ||||||||||| ||| | Sbjct 15608 ATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGC 15667 Query 170472 ATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACC 170530 | ||||||||| | |||||||| ||| | | ||||| |||| ||||| || |||| Sbjct 15668 TTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACCATGGCTTTCAACC 15726 >seq112378 Length=4714 Score = 113 bits (124), Expect = 5e-20 Identities = 164/231 (71%), Gaps = 7/231 (3%) Strand=Plus/Plus Query 170131 GGTCAGGGATCTTTCTCA-GACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCAT 170189 ||||| ||| ||| || || || ||||||||||| || || ||||| || |||||||| Sbjct 2512 GGTCAAGGAAGTTTTTCCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCAT 2571 Query 170190 GTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGC 170249 | | ||||||||||| |||| || |||||||||||| |||||| || || || Sbjct 2572 GATTATATTCCAAGCACAGCA------TCCTATGCACCCATTTCATATGTTGGGTGTAGC 2625 Query 170250 TGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCT 170309 |||| | ||| | || | || ||| | ||||| ||||| | ||||| ||| | | Sbjct 2626 TGGTGTATTCAGTGGCTCCCTATTCAGTGTTATGCATGGTTCCTTGGTAACTTCTAGTTT 2685 Query 170310 AATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTCGG 170360 ||||| || || ||| | || || || || | || ||||||||||| Sbjct 2686 GATCAGGGAAACCACATAAAATGAATCTGCTAATGAAGGTTACAAATTCGG 2736 >seq8266 Length=1953 Score = 113 bits (124), Expect = 5e-20 Identities = 216/316 (68%), Gaps = 22/316 (7%) Strand=Plus/Plus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| || || | ||||| | || |||| ||||| ||||| |||||||||| | Sbjct 849 TGGATAACCAGTACCGAAAACCGTCTTTACATTGGATGGTTTGGTGT-TTGATGATCCTA 907 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 ||||| | ||| | | || ||||| ||| ||||| || ||||| || || || Sbjct 908 AC-CTATTGACCGCAACTTC-TGTTTTAT---TGCCTTCATTGCTGCTCCTCCAGTAGAT 962 Query 169819 ATCGATGGAAT--------------CAGA--GAACCTGTAGCAGGTTCATTCATGTATGG 169862 || ||||| || | || |||||||| | || || | | || || Sbjct 963 ATTGATGGTATTCGTGAAACCGTTTCGGATTGAACCTGTTTCTGGATCTCTACTTTACGG 1022 Query 169863 TAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTA 169922 ||||| || || || ||||| || |||| |||| || |||||| | ||||| || Sbjct 1023 AAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTA 1082 Query 169923 TCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATT 169982 || || |||||||||||| | | ||||| ||||| || ||||||||||||||| || | Sbjct 1083 CCCAATCTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACT 1142 Query 169983 AGTTATCTTCCACTTC 169998 | || | | |||||| Sbjct 1143 AATTGTTCTACACTTC 1158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581457353814400