Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= NC_015569.1
Length=178563
Score E
Sequences producing significant alignments: (Bits) Value
seq165807 639 2e-178
seq452 630 8e-176
seq3541 255 7e-63
seq8266 140 4e-28
seq112378 132 5e-26
>seq165807
Length=4432
Score = 639 bits (708), Expect = 2e-178
Identities = 727/973 (75%), Gaps = 2/973 (0%)
Strand=Plus/Minus
Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044
||||| ||||| || |||||||| ||||| |||||||||||||| ||||| ||||
Sbjct 3926 GGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGGTTAATA 3867
Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104
| ||| ||||||||||| | ||||| ||| ||||| || | | || ||||| ||
Sbjct 3866 ATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGATTGGTTGAAATTG 3807
Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164
|| ||||| ||||| || ||||| ||||||| ||| | ||||| ||||| || || ||
Sbjct 3806 AAACCATTTAGATTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAACCAGATACCTACT 3747
Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224
|| ||||||||||| ||||| || || | ||||||| ||||| || |||||| |||
Sbjct 3746 ACAGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTAAAACTAGCATATTGG 3687
Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284
||||| | || || || || || ||||| || || |||||||||||||| || ||||||
Sbjct 3686 AAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTTTCTTCCTCTTGA 3627
Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344
|| || ||||||| | || || |||||||||| ||||| | ||| | | |||
Sbjct 3626 CCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAG 3567
Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404
|| || | ||||||||||| ||| |||||| | || |||||||||||||| || ||
Sbjct 3566 GTTACCAAAGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACGCCT 3507
Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464
||||||||||| || |||||||||||||| || || |||||||| |||| ||| ||||
Sbjct 3506 AACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATAAAGTTA 3447
Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524
|| || || ||||| || || ||||| ||||| || ||| ||||| |||| |||||
Sbjct 3446 AAAGTACCAGAGATTCCTAGAGGCATCCCATCCGAAAAACTTCCTTGACCGATTGGATAA 3387
Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGA 84584
| | ||| ||||||| ||||| ||||| ||||| || || |||||| ||||| |||
Sbjct 3386 ATCAAGAAAACAGCAGTAGCCGCCGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGA 3327
Query 84585 CGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATC 84644
|||||||| ||||| | ||||||||| ||||| ||||||||| | | ||||||
Sbjct 3326 CGCATACCCAGACGGAAACTAAGTTCCCACTCACGCCCCATGTAACAAGCTACACCAAGT 3267
Query 84645 AGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTT 84704
| |||||| | |||| || | |||||| || || || |||| |||||| || | |
Sbjct 3266 AAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCGTTGTATAACCATTCATCAACGGAT 3207
Query 84705 GCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCA 84764
|| |||||||| || || || || || | || ||||| ||| | |||| | ||||
Sbjct 3206 GCCGCTTCCCATATTGGGTAAAAGTGCAACCCTATAGCCGCAGAAGTAGGAATAATGGCA 3147
Query 84765 CCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCA 84824
||||||||||| |||||||| || | ||||| |||| || || ||||| ||||| |||
Sbjct 3146 CCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCA 3087
Query 84825 ATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAG 84883
|| || ||||| || ||| ||| ||| || || || || ||||| ||| || | | ||
Sbjct 3086 ATGTCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA-AGTTGCGGTCAATAA 3028
Query 84884 AGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGAC 84943
||| |||||||| | | |||||||| |||| ||| | |||||| | |||| ||| |
Sbjct 3027 AGTAGGAATCATCAAAACACCAAACCATCCAATATAAAGACGGTTTTCAGTGCTGGTTAT 2968
Query 84944 CCAATCACAGAAG 84956
||||| |||||||
Sbjct 2967 CCAATTACAGAAG 2955
>seq452
Length=65819
Score = 630 bits (698), Expect = 8e-176
Identities = 725/973 (75%), Gaps = 2/973 (0%)
Strand=Plus/Plus
Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044
||||||||||| || |||||||| ||||| |||||||||||||| ||||| || |
Sbjct 9787 GGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGGTTGATG 9846
Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104
| ||| ||||| ||||| | |||||| ||| ||||| || | | || ||||| ||
Sbjct 9847 ATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTACAGATTGGTTGAAATTG 9906
Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164
|| ||||| || || || ||||||||||| | ||| | ||||| ||||| || || ||
Sbjct 9907 AAACCATTTAGGTTGAAAGCCATGGTGCTGATACCTAAAGCAGTGAACCAGATACCTACT 9966
Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224
|| ||||||||||| ||||| ||||| | |||||| |||||||| |||||| |||
Sbjct 9967 ACAGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAGTTGTTGAAACTAGCATATTGG 10026
Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284
||||| | || || ||||| || |||||||| || |||||||||||||| || ||||||
Sbjct 10027 AAGATCAATCGGCCAAAGTAACCATGAGCAGCTACGATATTATAAGTTTCTTCCTCTTGA 10086
Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344
||||| ||||||| | || || |||||||||| ||||| | ||| | | ||||
Sbjct 10087 CCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAA 10146
Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404
|| || | ||||||||||| ||| |||||| | || |||||||||||||| || ||
Sbjct 10147 GTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCT 10206
Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464
||||| ||||| || |||||||||||||| || || |||||||| |||| |||| |||||
Sbjct 10207 AACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTG 10266
Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524
|| || || || || || || ||||| |||||||| ||| ||||| || | || ||
Sbjct 10267 AAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCAATTGGGTAG 10326
Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGA 84584
| | ||| ||||| | || |||||||| ||||| || || |||||| ||||| ||
Sbjct 10327 ATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATACGCAACAGCAATCCAAGGG 10386
Query 84585 CGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATC 84644
|||||||| | ||| | ||| ||||| ||||||||||||||| | | ||||||
Sbjct 10387 CGCATACCCAAACGGAAACTAAGCTCCCACTCACGACCCATGTAACAAGCTACACCAAGT 10446
Query 84645 AGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTT 84704
| |||||| | |||| |||| |||||| ||||| || |||| |||||| || | |
Sbjct 10447 AAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCATTCATCAACGGAT 10506
Query 84705 GCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCA 84764
||||||||||| || || || || || | ||| ||||| ||| | |||| | ||||
Sbjct 10507 GCTGCTTCCCAGATTGGGTAAAAGTGCAAACCGATAGCTGCAGAAGTAGGAATAATGGCA 10566
Query 84765 CCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCA 84824
|| ||||| || ||||||||||| | ||||| |||| || || ||||| ||||| |||
Sbjct 10567 CCTGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCA 10626
Query 84825 ATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAG 84883
||||| ||||| || ||| ||| ||| ||||| || || ||||| ||| || | | ||
Sbjct 10627 ATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGA-AGTTGCGGTCAATAA 10685
Query 84884 AGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGAC 84943
|| || ||||| | | |||||||| |||| || | |||||| | || ||| |
Sbjct 10686 GGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCGGTACTGGTTAT 10745
Query 84944 CCAATCACAGAAG 84956
||| | ||||||
Sbjct 10746 CCAGTTGCAGAAG 10758
>seq3541
Length=30046
Score = 255 bits (282), Expect = 7e-63
Identities = 271/357 (76%), Gaps = 3/357 (1%)
Strand=Plus/Minus
Query 84117 TTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACCACTGGCCAAGCA 84176
|| || ||||||||||| | ||| | ||||| ||||| || || || || |||||||||
Sbjct 15724 TTGAAAGCCATGGTGCTGATACCTAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCA 15665
Query 84177 GCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGAAGATAAGACGA 84236
|| | ||| ||||| | |||||| |||||||| |||||| |||||||| | ||
Sbjct 15664 GCTAGGAAGAAGTGTAATGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGG 15605
Query 84237 CCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGTAA 84296
|| ||||| || |||||||| || ||||||||||||| || ||||||||||| |||||
Sbjct 15604 CCAAAGTAACCATGAGCAGCTACGATATTATAAGTTTATTCCTCTTGACCGAATCTGTAA 15545
Query 84297 CCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTGAA 84356
|| | || || |||||||| | | | ||| | | |||||| || | |||
Sbjct 15544 CCTTCATTAGCAGATTCATTTTCT---TTCCCCCTGATCAAACTAGAAGTTACCAAGGAA 15488
Query 84357 CCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGAAAG 84416
|||||||| ||| |||||| | || |||||||||||||| || || ||||| |||||
Sbjct 15487 CCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCTAACATATGAAAT 15428
Query 84417 GGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCT 84473
|| |||||||||||||| || || |||||||| |||| |||| ||||||| || |||
Sbjct 15427 GGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTGAAAGTACCT 15371
>seq8266
Length=1953
Score = 140 bits (154), Expect = 4e-28
Identities = 245/354 (69%), Gaps = 22/354 (6%)
Strand=Plus/Minus
Query 84620 ACCCATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACC 84679
|||||||||| | | |||||| | |||||| | |||| |||| |||||| |||||
Sbjct 1185 ACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACC 1126
Query 84680 ATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAAT 84739
|| |||| |||||| || | |||||||||||| || || || || || | ||| ||
Sbjct 1125 GTTGTATAACCATTCATCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCGAT 1066
Query 84740 AGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACC 84799
||| ||| | |||| | |||||| ||||| || ||||||||||| | ||||| ||
Sbjct 1065 AGCTGCAGAAGTAGGAATAATGGCACCTGAAATAATATTGTTTCCGTAAAGTAGAGATCC 1006
Query 84800 AG--------------CG--ACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCAC 84843
|| || || | ||||| ||||| |||||||| ||||| || |||
Sbjct 1005 AGAAACAGGTTCAATCCGAAACGGTTTCACGAATACCATCAATATCTACTGGAGGAGCAG 946
Query 84844 CAACGAATGCAATGATGAAACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTC 84903
||| ||| ||| || ||||||| ||| || | | ||| ||| | ||||| | | |
Sbjct 945 CAATGAAGGCA---ATAAAACAGA-AGTTGCGGTCAATAG-GTTAGGATCATCA-AACAC 892
Query 84904 CAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGACCCAATCACAGAAGT 84957
||||||| |||| || | |||||| | || ||| | ||| | |||||||
Sbjct 891 CAAACCATCCAATGTAAAGACGGTTTTCGGTACTGGTTATCCAGTTGCAGAAGT 838
>seq112378
Length=4714
Score = 132 bits (146), Expect = 5e-26
Identities = 163/220 (74%), Gaps = 7/220 (3%)
Strand=Plus/Minus
Query 84284 ACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGA 84343
|||||| |||||||| | || || |||||| ||| ||||| | ||| | | |||
Sbjct 2737 ACCGAATTTGTAACCTTCATTAGCAGATTCATTTTATGTGGTTTCCCTGATCAAACTAGA 2678
Query 84344 AGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCC 84403
||| || | ||||||||||| || |||||| | |||| |||||||||||| || ||
Sbjct 2677 AGTTACCAAGGAACCATGCATAACACTGAATAGGGAGCCACTGAATACACCAGCTACACC 2618
Query 84404 CAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTT 84463
|||||| ||||| || ||||| |||||| | | || ||||| | || |||| ||||
Sbjct 2617 CAACATATGAAATGGGTGCAT-AGGATGCTGT-----GCTTGGAATATAATCATGAAGTT 2564
Query 84464 GAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAA 84503
||| || || || || || || ||||| ||||||| ||||
Sbjct 2563 GAAAGTACCAGAAATTCCTAGAGGCATACCATCAG-GAAA 2525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569910569754080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |