Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq452 493 4e-135 seq165807 491 1e-134 seq3541 170 6e-38 seq8266 123 7e-24 seq112378 109 2e-19 >seq452 Length=65819 Score = 493 bits (546), Expect = 4e-135 Identities = 696/975 (71%), Gaps = 2/975 (0%) Strand=Plus/Minus Query 25811 TGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCC 25870 ||| | || ||||| || |||||||| || | |||||||| || || | ||||| || Sbjct 10748 TGGATAACCAGTACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 10689 Query 25871 TGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACCGCCTGTAGA 25929 |||| | | || ||| | ||| ||||| |||||||||| || || || || ||||| Sbjct 10688 ACCTTATTGACCGCAACTTC-TGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGA 10630 Query 25930 TATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATC 25989 ||| ||||| || ||||| || ||||| || || || | |||||||||||||| || || Sbjct 10629 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTC 10570 Query 25990 AGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGC 26049 ||| || | | || | ||| || ||||| | || |||||||| ||||||||||| Sbjct 10569 AGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAATCTGGGAAGC 10510 Query 26050 TGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTT 26109 | | | || || ||| ||||||| || || || ||| |||| ||| | | ||||| Sbjct 10509 AGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTT 10450 Query 26110 CTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAAT 26169 |||| | || ||||| || || | ||||||| || || | | | || || Sbjct 10449 CTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTTTGGGTAT 10390 Query 26170 GAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTT 26229 | | || ||||| |||||| ||| |||| || | | || ||| ||| || ||||| Sbjct 10389 GCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTT 10330 Query 26230 AGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTAC 26289 | || || | || ||||| |||||| |||||| |||||||| || || |||||||| Sbjct 10329 GATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTAC 10270 Query 26290 TTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATAT 26349 ||| ||||| ||| | |||||||| || || || || || || ||||||||||| ||||| Sbjct 10269 TTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCATAT 10210 Query 26350 GGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGT 26409 | ||||| ||||| || ||||| || | || ||| ||||||||| || ||||| Sbjct 10209 GTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 10150 Query 26410 TACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTT 26469 ||||| | || ||||| ||||| | | || ||| | || || | || Sbjct 10149 AACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATT 10090 Query 26470 TGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAAT 26529 || ||||| ||||| || |||||||| || ||||| || || |||||||| |||| || Sbjct 10089 CGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTACTTTGGCCGATTGAT 10030 Query 26530 TTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCC 26589 || || ||||| ||||| || ||| ||||| | || ||||| | ||| ||||||| Sbjct 10029 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCC 9970 Query 26590 GGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGG 26649 || || || || ||| | || || | |||||| |||| ||||| || ||||||||||| Sbjct 9969 TGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACCATGGCTTTCAACCTAAATGG 9910 Query 26650 TTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCTGA 26709 ||| || || ||||| || ||||| ||| | | || |||| ||| |||||||| Sbjct 9909 TTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGA 9850 Query 26710 TGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTT 26769 | | | ||||| |||||||| || | ||||||||||| || ||||||||||||||||| Sbjct 9849 TATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTT 9790 Query 26770 TCCACTTGACTTAGC 26784 || || ||| |||| Sbjct 9789 CCCTCTAGACCTAGC 9775 >seq165807 Length=4432 Score = 491 bits (544), Expect = 1e-134 Identities = 703/985 (71%), Gaps = 4/985 (0%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || ||||| |||||||| ||| | |||||||| || || | Sbjct 2956 TTCTGTAATTGGATAACCAGCACTGAAAACCGTCTTTATATTGGATGGTTTGGTGTTTTG 3015 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || ||| | | || ||| | ||| ||||| | || ||||| || || || Sbjct 3016 ATGATTCCTACTTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCCCC 3074 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || ||||| || ||||| || ||||| || ||||| || || || | || |||||||| Sbjct 3075 TCCAGTAGACATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 3134 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || || || | || |||||||| || Sbjct 3135 TATCATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGGTTGCACTTTTACCCAAT 3194 Query 26041 CTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099 |||||||| |||| | | || || ||| ||||||| ||||| || ||| | || ||| Sbjct 3195 ATGGGAAGC-GGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAGCTAATTG 3253 Query 26100 TCTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACA 26159 | | ||||||||| | || ||||| || ||| | |||||||||| || | Sbjct 3254 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGGCGTGAGTGGGAACTTAGTTTCC 3313 Query 26160 GACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCG 26219 | || || ||| | || ||||| |||||||||| |||| || | | || ||| | Sbjct 3314 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCGGCTACTG 3373 Query 26220 CAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTA 26279 | || ||||| ||||||| |||| ||||| |||||| ||||| |||||||| || | Sbjct 3374 CTGTTTTCTTGATTTATCCAATCGGTCAAGGAAGTTTTTCGGATGGGATGCCTCTAGGAA 3433 Query 26280 TCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACC 26339 ||||||||||||||||||||||| | |||||||| || || || || || || ||||||| Sbjct 3434 TCTCTGGTACTTTTAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 3493 Query 26340 CATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACG 26399 |||| || ||| || || ||||| || ||||| || | || ||| ||||||||| | Sbjct 3494 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 3553 Query 26400 GAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATG 26459 | |||||| || || | || ||||| ||||| | | || ||| | | Sbjct 3554 GTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 3613 Query 26460 GCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTG 26519 | || | ||||| ||||| ||||| || |||||||| || || || || || || |||| Sbjct 3614 GTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTTTG 3673 Query 26520 GGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTG 26579 | |||| || || || ||||| |||||||| ||| |||||| | |||||||| | | Sbjct 3674 GCCGATTGATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACATTTCTTCTTAG 3733 Query 26580 CTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTA 26639 || ||||||| || || || || ||| | || || | ||||| |||| ||||| || | Sbjct 3734 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCA 3793 Query 26640 ACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTA 26699 | ||||||||||| || || ||||| || ||||| ||| | | || |||| || Sbjct 3794 ATCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 3853 Query 26700 CATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATG 26759 | ||||||||| | | ||||| |||||||| || | ||||||||||| || ||||||| Sbjct 3854 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 3913 Query 26760 CTCATAACTTTCCACTTGACTTAGC 26784 ||||||| || || || ||| |||| Sbjct 3914 CTCATAATTTCCCTCTAGACCTAGC 3938 >seq3541 Length=30046 Score = 170 bits (188), Expect = 6e-38 Identities = 254/358 (71%), Gaps = 3/358 (1%) Strand=Plus/Plus Query 26285 GGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTC 26344 |||||||| ||||| ||| | |||||||| || || || || || || ||||||||||| Sbjct 15372 GGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 15431 Query 26345 CATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGT 26404 |||||| ||||| ||||| || ||||| || | || ||| ||||||||| || Sbjct 15432 CATATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCC 15491 Query 26405 TTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTAT 26464 ||||| ||||| | || ||| || ||| | | || ||| | || || Sbjct 15492 TTGGTAACTTC--TAGTTTGATCAG-GGGGAAAGAAAATGAATCTGCTAATGAAGGTTAC 15548 Query 26465 AAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGA 26524 | || || ||||| ||| | || |||||||| || ||||| || || |||||||| || Sbjct 15549 AGATTCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATGGTTACTTTGGCCGA 15608 Query 26525 TTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACT 26584 || || || || ||||| ||||| || ||| ||||| | || ||||| || ||| || Sbjct 15609 TTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGCT 15668 Query 26585 TGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACC 26642 ||||| || || || || ||| | || || | |||||| |||| ||||| || |||| Sbjct 15669 TGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACCATGGCTTTCAACC 15726 >seq8266 Length=1953 Score = 123 bits (136), Expect = 7e-24 Identities = 226/330 (68%), Gaps = 22/330 (7%) Strand=Plus/Plus Query 25811 TGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCC 25870 ||| | || ||||| || |||||||| || | |||||||| || || | ||||| || Sbjct 849 TGGATAACCAGTACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTT-TGATGAT-CCT 906 Query 25871 TGCTTACTCGCAGCCACTACATGTTTTATACTTGCCTTCATCGCAGCACCGCCTGTAGAT 25930 | || | | || ||| | |||||||| ||||||||| || || || || |||||| Sbjct 907 AACCTATTGACCGCAACTTC-TGTTTTAT---TGCCTTCATTGCTGCTCCTCCAGTAGAT 962 Query 25931 ATAGATGGCATACGTGAG----------------CCAGTTTCCGGCTCGTTAATGTACGG 25974 || ||||| || ||||| || ||||| || || || | ||||| Sbjct 963 ATTGATGGTATTCGTGAAACCGTTTCGGATTGAACCTGTTTCTGGATCTCTACTTTACGG 1022 Query 25975 AAACAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTA 26034 ||||||||| || ||||| || | | || | ||| || ||||| | || ||||| Sbjct 1023 AAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTA 1082 Query 26035 CCCGATCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACT 26094 ||| ||||||||||| | | | || || ||| ||||||| || || || ||| |||| Sbjct 1083 CCCAATCTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACT 1142 Query 26095 CATTATCTTCCACTTCTTAATAGGAGTAGC 26124 ||| | | ||||||||| | || ||||| Sbjct 1143 AATTGTTCTACACTTCTTACTTGGTGTAGC 1172 >seq112378 Length=4714 Score = 109 bits (120), Expect = 2e-19 Identities = 129/174 (74%), Gaps = 7/174 (4%) Strand=Plus/Plus Query 26243 GGACAAGGGAGTTTTAG-TGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTAT 26301 || ||||| |||||| |||||| |||||||| || || ||||||||||| ||||| || Sbjct 2512 GGTCAAGGAAGTTTTTCCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCAT 2571 Query 26302 GTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGC 26361 | | ||||||||||| | ||| | ||||||||||| |||||| ||||| || Sbjct 2572 GATTATATTCCAAGCACAGCAT------CCTATGCACCCATTTCATATGTTGGGTGTAGC 2625 Query 26362 TGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTC 26415 ||| || ||| |||| | || ||| || |||||| || ||||| ||||| Sbjct 2626 TGGTGTATTCAGTGGCTCCCTATTCAGTGTTATGCATGGTTCCTTGGTAACTTC 2679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146393822238624