Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq452 551 2e-152 seq165807 515 1e-141 seq3541 167 7e-37 seq8266 132 1e-26 seq112378 111 5e-20 seq101245 84.2 7e-12 >seq452 Length=65819 Score = 551 bits (610), Expect = 2e-152 Identities = 710/980 (72%), Gaps = 0/980 (0%) Strand=Plus/Plus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| |||||||| || |||||||| || || ||||| ||||||||||||||||| || | Sbjct 9771 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 9830 Query 36029 GTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGAC 36088 || |||||||| | || ||||||||||| | || | || | |||||| || Sbjct 9831 GTTAGCACGGTTGATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTAC 9890 Query 36089 TGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGT 36148 || || ||||| || || || || || || |||||||| ||| || || | ||| || Sbjct 9891 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTGATACCTAAAGCAGT 9950 Query 36149 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATT 36208 | ||| || | || ||||||||||| | |||||| ||||| || || || Sbjct 9951 GAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAGTTGTT 10010 Query 36209 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 36268 || |||||||| |||||||| | || |||||||| |||||||| || || || ||||| Sbjct 10011 GAAACTAGCATATTGGAAGATCAATCGGCCAAAGTAACCATGAGCAGCTACGATATTATA 10070 Query 36269 CGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTC 36328 || ||||| ||||| |||||| | || || | || ||||||| | || ||||| Sbjct 10071 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 10130 Query 36329 ACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 36388 | || | ||||| || | || ||||||||| ||||| | || ||||| Sbjct 10131 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 10190 Query 36389 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAA 36448 ||| || || ||||| | |||||| || || ||||||||||| ||||| || ||||| || Sbjct 10191 TACACCAGCTACACCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 10250 Query 36449 GACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCC 36508 |||| ||| || |||||||| || ||||| || ||||||||||||||||| ||||| || Sbjct 10251 TACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCC 10310 Query 36509 TTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGC 36568 ||| |||| ||||||| ||||| ||||| || ||||||||||| |||||||| || Sbjct 10311 TTGACCAATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATACGC 10370 Query 36569 TACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTA 36628 ||| ||||| || | |||||| | | ||||||| ||||| | || |||| ||| Sbjct 10371 AACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGCTCCCACTCACGACCCATGTA 10430 Query 36629 AGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAA 36688 | | | ||||| | ||||| | ||||| |||| ||| || || ||||| ||||| Sbjct 10431 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAA 10490 Query 36689 CCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGA 36748 ||| || || | || ||| ||||||||||||||||| ||||| | |||||| || || Sbjct 10491 CCATTCATCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCGATAGCTGCAGA 10550 Query 36749 TGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGG 36808 | || | || || || || || || |||||||| || |||| | ||| || ||||| Sbjct 10551 AGTAGGAATAATGGCACCTGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGG 10610 Query 36809 CTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGT 36868 |||||||||||||| ||||| || ||||| ||||||| || ||||| | |||| | | Sbjct 10611 TTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGA 10670 Query 36869 CACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTT 36928 ||| || || | | ||||||||| | || |||||||| || | || || ||||| Sbjct 10671 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 10730 Query 36929 GTTTGTACTTGTAACCCAGT 36948 | ||||| || | ||||| Sbjct 10731 TTCGGTACTGGTTATCCAGT 10750 >seq165807 Length=4432 Score = 515 bits (570), Expect = 1e-141 Identities = 707/988 (72%), Gaps = 0/988 (0%) Strand=Plus/Minus Query 35968 CAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTA 36027 |||| |||||||| || ||||| || || || ||||| ||||||||||||||||| || | Sbjct 3943 CAGCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAA 3884 Query 36028 AGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGA 36087 || |||||||||| ||| |||||||| || | || | || | |||||| | Sbjct 3883 GGTTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTA 3824 Query 36088 CTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGG 36147 | || || ||||| || || || || ||||| |||||||||||| | || | ||| | Sbjct 3823 CAGATTGGTTGAAATTGAAACCATTTAGATTGAAAGCCATAGTGCTAATACCTAAAGCAG 3764 Query 36148 TAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTAT 36207 | | ||| || | || ||||||||||| | ||||||||||||| || || | Sbjct 3763 TGAACCAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGT 3704 Query 36208 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 36267 |||| |||||||| |||||||| | || ||||| || |||||||| || || || |||| Sbjct 3703 TAAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTAT 3644 Query 36268 ACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTT 36327 | || ||||| ||||| || ||| | || || | || ||||||| | || |||| Sbjct 3643 AAGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTT 3584 Query 36328 CACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGA 36387 | | || | || || || | | || ||||||||| ||||| | || |||| Sbjct 3583 CCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTGAATAGGGAGCCGCCGA 3524 Query 36388 ATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAA 36447 |||| || || || || | ||| || || || ||||||||||| ||||| || ||||| | Sbjct 3523 ATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 3464 Query 36448 AGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCC 36507 | |||| |||||| || ||||| || || || || |||||||| ||||| || ||||| | Sbjct 3463 ATACAATCATAAAGTTAAAAGTACCAGAGATTCCTAGAGGCATCCCATCCGAAAAACTTC 3404 Query 36508 CTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAG 36567 |||| || | || || | ||||| |||||| || || |||||||| |||||||| | Sbjct 3403 CTTGACCGATTGGATAAATCAAGAAAACAGCAGTAGCCGCCGCAACAGGAGCTGAATATG 3344 Query 36568 CTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGT 36627 | ||| ||||| || | |||||| || | ||||||||||||| | || |||| || Sbjct 3343 CAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGCCCCATGT 3284 Query 36628 AAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATA 36687 || | | ||||| | ||||| | ||||| || | ||| || || ||||| |||| Sbjct 3283 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCGTTGTATA 3224 Query 36688 ACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCG 36747 |||| || || | || ||| |||||||| |||||||| ||||| | || || || | Sbjct 3223 ACCATTCATCAACGGATGCCGCTTCCCATATTGGGTAAAAGTGCAACCCTATAGCCGCAG 3164 Query 36748 ATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAG 36807 | | || | || || ||||| ||||| ||||||||||| |||| | ||| || |||| Sbjct 3163 AAGTAGGAATAATGGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAG 3104 Query 36808 GCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTG 36867 | |||||||||||||| || || || ||||| ||||||| || || || | |||| | | Sbjct 3103 GTTCACGAATACCATCAATGTCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAG 3044 Query 36868 TCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGT 36927 ||| || || | | ||| ||||| | || |||||||| || | ||| || |||| Sbjct 3043 AAGTTGCGGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATATAAAGACGGT 2984 Query 36928 TGTTTGTACTTGTAACCCAGTCACATAA 36955 | | || || || | ||| | ||| || Sbjct 2983 TTTCAGTGCTGGTTATCCAATTACAGAA 2956 >seq3541 Length=30046 Score = 167 bits (184), Expect = 7e-37 Identities = 254/360 (71%), Gaps = 9/360 (3%) Strand=Plus/Minus Query 36117 TTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGCCATATGCAAGTGACGGGCCAAGCA 36176 || |||||||| ||| || || | ||| || | ||| || | || ||||||||| Sbjct 15724 TTGAAAGCCATGGTGCTGATACCTAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCA 15665 Query 36177 GCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAGCTAGCATACTGGAAGATGAGTCTC 36236 || |||||||| ||||| || || || || |||||||| |||||||| | || Sbjct 15664 GCTAGGAAGAAGTGTAATGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGG 15605 Query 36237 CCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCGAATTTATAT 36296 |||||||| |||||||| || || || ||||| || | ||| ||||| |||||| | || Sbjct 15604 CCAAAGTAACCATGAGCAGCTACGATATTATAAGTTTATTCCTCTTGACCGAATCTGTAA 15545 Query 36297 CCATAGTTCTGAGATTCAAGCCCAGTTGTTTCAC---GAATAAGTGAGGAAGTAACAAGA 36353 || | || ||||||| || |||| | || || | ||||| || | Sbjct 15544 CCTTCATTAGCAGATTCA-----TTTTCTTTCCCCCTGATCAAACTA-GAAGTTACCAAG 15491 Query 36354 CTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGG 36413 || ||||||||| ||||| | || |||||||| || || ||||| | |||||| Sbjct 15490 GAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCTAACATATGA 15431 Query 36414 AACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCT 36473 || || ||||||||||| ||||| || ||||| || |||| ||| || |||||||| ||| Sbjct 15430 AATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTGAAAGTACCT 15371 >seq8266 Length=1953 Score = 132 bits (146), Expect = 1e-26 Identities = 220/317 (69%), Gaps = 22/317 (7%) Strand=Plus/Minus Query 36648 AAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCA 36707 ||||| | ||||| |||| ||| || || ||||| |||||||| || || | || ||| Sbjct 1157 AAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCATTCATCAACGGATGCT 1098 Query 36708 GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCA 36767 ||||||||||||||||| ||||| | |||||| || || | || | || || || Sbjct 1097 GCTTCCCAGATTGGGTAAAAGTGCAAACCGATAGCTGCAGAAGTAGGAATAATGGCACCT 1038 Query 36768 GAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGG----------------CTC 36811 || || || |||||||| || |||| | ||| || ||||| || Sbjct 1037 GAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCAATCCGAAACGGTTTC 978 Query 36812 ACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCAC 36871 |||||||||||| ||||| || ||||| ||||||| || |||| ||||| | || Sbjct 977 ACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAA-TAAAACAGAAGT--- 922 Query 36872 TGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTT 36931 ||| || || || | ||||||| | || |||||||| || | || || ||||| | Sbjct 921 TGCGGTCAATAG-GTTAGGATCATCA-AACACCAAACCATCCAATGTAAAGACGGTTTTC 864 Query 36932 TGTACTTGTAACCCAGT 36948 ||||| || | ||||| Sbjct 863 GGTACTGGTTATCCAGT 847 >seq112378 Length=4714 Score = 111 bits (122), Expect = 5e-20 Identities = 128/170 (75%), Gaps = 7/170 (4%) Strand=Plus/Minus Query 36357 CCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAAC 36416 || |||||| || ||||| | |||| |||||| || || ||||| | |||||| || Sbjct 2664 CCATGCATAACACTGAATAGGGAGCCACTGAATACACCAGCTACACCCAACATATGAAAT 2605 Query 36417 GGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAA 36476 || |||||| |||| |||| | || || | || ||| || |||||||| || ||| Sbjct 2604 GGGTGCATA-GGATGCTGTGCT-----TGGAATATAATCATGAAGTTGAAAGTACCAGAA 2551 Query 36477 ATACCAAGAGGCATACCATCA-GAGAAACTCCCTTGTCCAAAAGGGTAGA 36525 || || ||||||||||||||| || ||||| ||||| |||| ||||||| Sbjct 2550 ATTCCTAGAGGCATACCATCAGGAAAAACTTCCTTGACCAATTGGGTAGA 2501 >seq101245 Length=1004 Score = 84.2 bits (92), Expect = 7e-12 Identities = 75/94 (80%), Gaps = 4/94 (4%) Strand=Plus/Minus Query 35969 AGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAA 36028 ||| |||||||| || |||||||| || || ||||| ||||||||||||||||| || || Sbjct 694 AGCAGCTAGGTCTAGAGGGAAGTTCTGAGCATTACGTTCATGCATAACTTCCATACCAAA 635 Query 36029 GT----CGGCACGGTTAAGAATGTCAGCCCAAGT 36058 || |||||| ||| || ||||||||||| Sbjct 634 GTTAGCTCGCACGGCTAATGATATCAGCCCAAGT 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150113372158104