Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq452 547 2e-151 seq165807 497 3e-136 seq3541 170 6e-38 seq8266 141 3e-29 seq112378 111 5e-20 seq101245 80.6 8e-11 >seq452 Length=65819 Score = 547 bits (606), Expect = 2e-151 Identities = 707/976 (72%), Gaps = 0/976 (0%) Strand=Plus/Plus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512 |||| ||| ||||||||||| || || ||||| ||||||||||||||||| || | || Sbjct 9775 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 9834 Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 |||||||| | || ||||||||||| | || | || | |||||| || || Sbjct 9835 GCACGGTTGATGATATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTACAGAT 9894 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || ||||| || || || || || || |||||||| ||| || || | ||| || | | Sbjct 9895 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATGGTGCTGATACCTAAAGCAGTGAAC 9954 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692 || || | || ||||||||||| | |||||| ||||| ||| || || || Sbjct 9955 CAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAGTTGTTGAAA 10014 Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752 |||||||| |||||||| | || |||||||| |||||||| || || || ||||| || Sbjct 10015 CTAGCATATTGGAAGATCAATCGGCCAAAGTAACCATGAGCAGCTACGATATTATAAGTT 10074 Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812 ||||| ||||| |||||| | || || | || ||||||| | || ||||| | Sbjct 10075 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 10134 Query 25813 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 25872 || | ||||| || | || ||||||||| ||||| | || |||||||| Sbjct 10135 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 10194 Query 25873 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 25932 || || ||||| | |||||| || || ||||||||||| ||||| || ||||| || ||| Sbjct 10195 CCAGCTACACCTAACATATGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACA 10254 Query 25933 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 25992 | ||| || |||||||| || ||||| || ||||||||||||||||| ||||| ||||| Sbjct 10255 ATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGA 10314 Query 25993 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 26052 |||| ||||||| ||||| ||||| || ||||||||||| |||||||| || ||| Sbjct 10315 CCAATTGGGTAGATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATACGCAACA 10374 Query 26053 CATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 26112 ||||| || | ||| || | | ||||||| ||||| | || |||| |||| Sbjct 10375 GCAATCCAAGGGCGCATACCCAAACGGAAACTAAGCTCCCACTCACGACCCATGTAACAA 10434 Query 26113 GAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCAC 26172 | | || | | ||||| | ||||| |||| ||| || |||||||| || ||||| Sbjct 10435 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCAT 10494 Query 26173 TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGAC 26232 || || | || ||| ||||||||||||||||| ||||| | |||||| || ||| | Sbjct 10495 TCATCAACGGATGCTGCTTCCCAGATTGGGTAAAAGTGCAAACCGATAGCTGCAGAAGTA 10554 Query 26233 GGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCA 26292 || | || || ||||| || || |||||||| || |||| | ||| || ||||| ||| Sbjct 10555 GGAATAATGGCACCTGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCA 10614 Query 26293 CGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACT 26352 ||||||||||| ||||| || ||||| ||||||| || ||||| | |||| | | | Sbjct 10615 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACAGAAGTT 10674 Query 26353 GCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTT 26412 || || || | | ||||||||| | || |||||||| || | || || ||||| | Sbjct 10675 GCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCG 10734 Query 26413 GTACTTGTAACCCAGT 26428 ||||| || | ||||| Sbjct 10735 GTACTGGTTATCCAGT 10750 >seq165807 Length=4432 Score = 497 bits (550), Expect = 3e-136 Identities = 700/983 (71%), Gaps = 0/983 (0%) Strand=Plus/Minus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 25512 |||| ||| |||||||| || || || ||||| ||||||||||||||||| || | || Sbjct 3938 GCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 3879 Query 25513 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 25572 |||||||||| ||| |||||||| || | || | || | |||||| || || Sbjct 3878 GCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 3819 Query 25573 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 25632 || ||||| || || || || ||||| |||||||||||| | || | ||| || | | Sbjct 3818 TGGTTGAAATTGAAACCATTTAGATTGAAAGCCATAGTGCTAATACCTAAAGCAGTGAAC 3759 Query 25633 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAAG 25692 || || | || ||||||||||| | ||||||||||||| ||| || ||||| Sbjct 3758 CAGATACCTACTACAGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTAAAA 3699 Query 25693 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 25752 |||||||| |||||||| | || ||||| || |||||||| || || || ||||| || Sbjct 3698 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATAAGTT 3639 Query 25753 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 25812 ||||| ||||| || ||| | || || | || ||||||| | || ||||| | Sbjct 3638 TCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTG 3579 Query 25813 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 25872 || | || || || | | || ||||||||| ||||| | || |||||||| Sbjct 3578 ATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 3519 Query 25873 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 25932 || || || || | ||| || || || ||||||||||| ||||| || ||||| || ||| Sbjct 3518 CCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACA 3459 Query 25933 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 25992 | |||||| || ||||| || || || || |||||||| ||||| || ||||| ||||| Sbjct 3458 ATCATAAAGTTAAAAGTACCAGAGATTCCTAGAGGCATCCCATCCGAAAAACTTCCTTGA 3399 Query 25993 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 26052 || | || || | ||||| |||||| || || |||||||| |||||||| || ||| Sbjct 3398 CCGATTGGATAAATCAAGAAAACAGCAGTAGCCGCCGCAACAGGAGCTGAATATGCAACA 3339 Query 26053 CATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 26112 ||||| || | ||| || || | ||||||||||||| | || |||| |||| Sbjct 3338 GCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGCCCCATGTAACAA 3279 Query 26113 GAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCAC 26172 | | || | | ||||| | ||||| || | ||| || || ||||| || ||||| Sbjct 3278 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCGTTGTATAACCAT 3219 Query 26173 TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGAC 26232 || || | || ||| |||||||| |||||||| ||||| | || || || ||| | Sbjct 3218 TCATCAACGGATGCCGCTTCCCATATTGGGTAAAAGTGCAACCCTATAGCCGCAGAAGTA 3159 Query 26233 GGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCA 26292 || | || || || || ||||| ||||||||||| |||| | ||| || ||||| ||| Sbjct 3158 GGAATAATGGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 3099 Query 26293 CGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACT 26352 ||||||||||| || || || ||||| ||||||| || || || | |||| | | | Sbjct 3098 CGAATACCATCAATGTCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTT 3039 Query 26353 GCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTT 26412 || || || | | ||| ||||| | || |||||||| || | ||| || ||||| | Sbjct 3038 GCGGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATATAAAGACGGTTTTCA 2979 Query 26413 GTACTTGTAACCCAGTCACATAA 26435 || || || | ||| | ||| || Sbjct 2978 GTGCTGGTTATCCAATTACAGAA 2956 >seq3541 Length=30046 Score = 170 bits (188), Expect = 6e-38 Identities = 255/360 (71%), Gaps = 9/360 (3%) Strand=Plus/Minus Query 25597 TTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGCCATATGCAAGTGACGGGCCAAGCA 25656 || |||||||| ||| || || | ||| || | ||| || | || ||||||||| Sbjct 15724 TTGAAAGCCATGGTGCTGATACCTAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCA 15665 Query 25657 GCCAGGAAGAAATGTAAACTACGGCTATTATTAAAGCTAGCATACTGGAAGATGAGTCTC 25716 || |||||||| ||||| ||| || || || |||||||| |||||||| | || Sbjct 15664 GCTAGGAAGAAGTGTAATGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGG 15605 Query 25717 CCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCGAATTTATAT 25776 |||||||| |||||||| || || || ||||| || | ||| ||||| |||||| | || Sbjct 15604 CCAAAGTAACCATGAGCAGCTACGATATTATAAGTTTATTCCTCTTGACCGAATCTGTAA 15545 Query 25777 CCATAGTTCTGAGATTCAAGCCCAGTTGTTTCAC---GAATAAGTGAGGAAGTAACAAGA 25833 || | || ||||||| || |||| | || || | ||||| || | Sbjct 15544 CCTTCATTAGCAGATTCA-----TTTTCTTTCCCCCTGATCAAACTA-GAAGTTACCAAG 15491 Query 25834 CTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGG 25893 || ||||||||| ||||| | || |||||||| || || ||||| | |||||| Sbjct 15490 GAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCTAACATATGA 15431 Query 25894 AACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCT 25953 || || ||||||||||| ||||| || ||||| || |||| ||| || |||||||| ||| Sbjct 15430 AATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTGAAAGTACCT 15371 >seq8266 Length=1953 Score = 141 bits (156), Expect = 3e-29 Identities = 222/317 (70%), Gaps = 22/317 (7%) Strand=Plus/Minus Query 26128 AAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCACTCGTCGAGGGTTGCA 26187 ||||| | ||||| |||| ||| || |||||||| || ||||| || || | || ||| Sbjct 1157 AAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAACCATTCATCAACGGATGCT 1098 Query 26188 GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCT 26247 ||||||||||||||||| ||||| | |||||| || ||| | || | || || ||| Sbjct 1097 GCTTCCCAGATTGGGTAAAAGTGCAAACCGATAGCTGCAGAAGTAGGAATAATGGCACCT 1038 Query 26248 GAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGG----------------CTC 26291 || || || |||||||| || |||| | ||| || ||||| || Sbjct 1037 GAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGTTCAATCCGAAACGGTTTC 978 Query 26292 ACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCAC 26351 |||||||||||| ||||| || ||||| ||||||| || |||| ||||| | || Sbjct 977 ACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCAA-TAAAACAGAAGT--- 922 Query 26352 TGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTT 26411 ||| || || || | ||||||| | || |||||||| || | || || ||||| | Sbjct 921 TGCGGTCAATAG-GTTAGGATCATCA-AACACCAAACCATCCAATGTAAAGACGGTTTTC 864 Query 26412 TGTACTTGTAACCCAGT 26428 ||||| || | ||||| Sbjct 863 GGTACTGGTTATCCAGT 847 >seq112378 Length=4714 Score = 111 bits (122), Expect = 5e-20 Identities = 128/170 (75%), Gaps = 7/170 (4%) Strand=Plus/Minus Query 25837 CCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAAC 25896 || |||||| || ||||| | |||| |||||| || || ||||| | |||||| || Sbjct 2664 CCATGCATAACACTGAATAGGGAGCCACTGAATACACCAGCTACACCCAACATATGAAAT 2605 Query 25897 GGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAA 25956 || |||||| |||| |||| | || || | || ||| || |||||||| || ||| Sbjct 2604 GGGTGCATA-GGATGCTGTGCT-----TGGAATATAATCATGAAGTTGAAAGTACCAGAA 2551 Query 25957 ATACCAAGAGGCATACCATCA-GAGAAACTCCCTTGTCCAAAAGGGTAGA 26005 || || ||||||||||||||| || ||||| ||||| |||| ||||||| Sbjct 2550 ATTCCTAGAGGCATACCATCAGGAAAAACTTCCTTGACCAATTGGGTAGA 2501 >seq101245 Length=1004 Score = 80.6 bits (88), Expect = 8e-11 Identities = 72/90 (80%), Gaps = 4/90 (4%) Strand=Plus/Minus Query 25453 GCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGT-- 25510 |||| ||| ||||||||||| || || ||||| ||||||||||||||||| || |||| Sbjct 690 GCTAGGTCTAGAGGGAAGTTCTGAGCATTACGTTCATGCATAACTTCCATACCAAAGTTA 631 Query 25511 --CGGCACGGTTAAGAATGTCAGCCCAAGT 25538 |||||| ||| || ||||||||||| Sbjct 630 GCTCGCACGGCTAATGATATCAGCCCAAGT 601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151649083326576