Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq42153 96.9 6e-15 >seq42153 Length=9390 Score = 96.9 bits (106), Expect = 6e-15 Identities = 242/357 (68%), Gaps = 12/357 (3%) Strand=Plus/Minus Query 25690 TTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTG 25749 |||||||| |||||||| |||||||| || | ||||| ||| |||| | || || Sbjct 5188 TTCTACGGGTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTC 5129 Query 25750 ATGACGTACATTACAGACGTCGCCGAGAGA-GATCGGC-TGTTTGGTGCCATCGAGCACA 25807 ||| ||||| || ||| | |||| || | || | || | || ||||| || Sbjct 5128 GAGACCTACATCCAAGTGATCGGAG-GAGAAGAGCCGCCTCTTCCGCGCGATCGACACCA 5070 Query 25808 TACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAG-CCAGAGCGCT 25866 | || || || ||||||||||| | ||||| ||| |||||| || | | ||| Sbjct 5069 TCCCTTGCGTCGAGAGGAAGGCGAGCTGGGCGCTGAGCTGGATCGACGGATCGGAG---- 5014 Query 25867 ACGTTTGGCGAGCGGCTGGTAGCCTTTGC-TGCTGTGGAGGGCATCTTTTTCAGC-GGTT 25924 ||||| | ||| || |||| ||||| || ||| || || || ||||| ||| | || Sbjct 5013 ACGTTCGCGGAGAGGTTGGTTGCCTTCGCGTGC-GTTGAAGGGATCTTCTTCTCCGGGAG 4955 Query 25925 CGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCA 25984 | | ||| ||||| || ||||| ||| || || |||||| |||||| ||||| | Sbjct 4954 CTTCTGC-GCCATTTTTTGGCTGAAGAAGCGCGGTCTCATGCCTGGGCTGACGTTTTCGA 4896 Query 25985 ACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 | || | ||| || || || || | ||| | ||||| || ||| |||| |||| Sbjct 4895 ATGAATTGATCTCGAGAGATGAAGGCTTGCACTGCGATTTCGCTTGCTTGCTGTACA 4839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 926628622749440