Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq119584 86.0 5e-12 seq37023 84.2 2e-11 seq156471 82.4 6e-11 >seq119584 Length=3068 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 || ||||| ||| | || || || ||||| || || ||||| || |||||||||||| Sbjct 2250 GATAAAGAAGGAATCCCTCCTGACCAGCAGAGGCTGATATTTGCTGGTAAACAATTGGAA 2309 Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||| | |||| |||| ||||| || || ||||||||||| ||||| ||| | || || Sbjct 2310 GATGGCAGAACTTTGGCGGATTACAATATCCAAAAAGAATCAACTCTTCACCTTGTTTTG 2369 Query 28767 AG 28768 || Sbjct 2370 AG 2371 >seq37023 Length=9928 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 || || ||||| || || ||||| || ||||||||||||||| | |||| |||| ||| Sbjct 227 GACCAGCAGAGGCTGATATTTGCTGGTAAACAATTGGAAGATGGCAGAACTTTGGCGGAT 286 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAG 28768 || || || ||||||||||| ||||| ||| | || || || Sbjct 287 TACAATATCCAAAAAGAATCAACTCTTCACCTTGTTTTGAG 327 >seq156471 Length=3476 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || || ||||| || ||||| || || || || Sbjct 1900 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 1959 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || || | | || | ||| ||||||| ||||| || || | || ||||| Sbjct 1960 GACACAGTCGACAATGTGAAGGCAAAAATCCAAGACAAGGAAGGTATCCCTCCGGATCAG 2019 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | || ||||| ||||||||| | || ||| | ||| |||| ||||| ||| Sbjct 2020 CAAAGATTGATTTTTGCAGGCAAACAACTCGAGGATGGCAGAACACTGGCGGATTACAAC 2079 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||||||||| || || || | || | |||| |||| ||||| Sbjct 2080 ATACAAAAAGAATCGACCCTTCATCTTGTGCTGCGATTGAGAGGTGGGAT 2129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424415180282004