Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq119584 86.0 5e-12
seq37023 84.2 2e-11
seq156471 82.4 6e-11
>seq119584
Length=3068
Score = 86.0 bits (94), Expect = 5e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706
|| ||||| ||| | || || || ||||| || || ||||| || ||||||||||||
Sbjct 2250 GATAAAGAAGGAATCCCTCCTGACCAGCAGAGGCTGATATTTGCTGGTAAACAATTGGAA 2309
Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766
||| | |||| |||| ||||| || || ||||||||||| ||||| ||| | || ||
Sbjct 2310 GATGGCAGAACTTTGGCGGATTACAATATCCAAAAAGAATCAACTCTTCACCTTGTTTTG 2369
Query 28767 AG 28768
||
Sbjct 2370 AG 2371
>seq37023
Length=9928
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727
|| || ||||| || || ||||| || ||||||||||||||| | |||| |||| |||
Sbjct 227 GACCAGCAGAGGCTGATATTTGCTGGTAAACAATTGGAAGATGGCAGAACTTTGGCGGAT 286
Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAG 28768
|| || || ||||||||||| ||||| ||| | || || ||
Sbjct 287 TACAATATCCAAAAAGAATCAACTCTTCACCTTGTTTTGAG 327
>seq156471
Length=3476
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| || || || ||||| || ||||| || || || ||
Sbjct 1900 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 1959
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || || | | || | ||| ||||||| ||||| || || | || |||||
Sbjct 1960 GACACAGTCGACAATGTGAAGGCAAAAATCCAAGACAAGGAAGGTATCCCTCCGGATCAG 2019
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | || ||||| ||||||||| | || ||| | ||| |||| ||||| |||
Sbjct 2020 CAAAGATTGATTTTTGCAGGCAAACAACTCGAGGATGGCAGAACACTGGCGGATTACAAC 2079
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||||||||| || || || | || | |||| |||| |||||
Sbjct 2080 ATACAAAAAGAATCGACCCTTCATCTTGTGCTGCGATTGAGAGGTGGGAT 2129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424415180282004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |