Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq165807 585 3e-162 seq452 567 8e-157 seq3541 210 3e-49 seq8266 136 5e-27 seq112378 116 4e-21 >seq165807 Length=4432 Score = 585 bits (648), Expect = 3e-162 Identities = 712/969 (73%), Gaps = 6/969 (1%) Strand=Plus/Plus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | ||| | || ||||| |||||| | ||||| ||| | | | | Sbjct 2978 CTGAAAACCGTCTTTATATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACCG 3037 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || ||| |||| ||||||||||| ||||| ||||||||||||||||||| Sbjct 3038 CAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGACATTGATGGTATTC 3097 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 ||||||| || |||| ||| || | ||||| ||||| ||||| |||||||| || | | Sbjct 3098 GTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCCATTATTC 3157 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| ||| || || || | ||||| || || || |||||||| ||| | |||||| Sbjct 3158 CTACTTCTGCGGCTATAGGGTTGCACTTTTACCCAATATGGGAAGCGGCATCCGTTGATG 3217 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 | ||||| ||||| || ||||||| | || | || | |||||| | | || | Sbjct 3218 AATGGTTATACAACGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAG 3277 Query 155291 CAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCT 155350 | ||| || ||| ||||||||||| || |||||| || |||||||||||||| Sbjct 3278 CTTGTTACATGGGGCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTG 3337 Query 155351 GTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCG 155410 ||||||||| || || || || | || || ||||| ||| | ||||||| ||| Sbjct 3338 CTGTTGCATATTCAGCTCCTGTTGCGGCGGCTACTGCTGTTTTCTTGATTTATCCAATCG 3397 Query 155411 GTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGT 155470 ||||||| ||| || |||| ||||||||| || ||||||||||||||||||| |||| Sbjct 3398 GTCAAGGAAGTTTTTCGGATGGGATGCCTCTAGGAATCTCTGGTACTTTTAACTTTATGA 3457 Query 155471 TCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAG 155530 | || ||||| || || ||||| |||||||||||||| || |||||| | || ||||| | Sbjct 3458 TTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTG 3517 Query 155531 GTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAA 155590 |||| ||||| || || || ||| ||||||||| ||||| ||||| || ||| | | Sbjct 3518 GTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGA 3577 Query 155591 TCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 155650 || | ||||| || || | || ||| || | ||||||| || || ||||| |||| Sbjct 3578 TCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAG 3637 Query 155651 AAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCAT 155710 |||||||||| || || || |||||||| || || || || | |||||||| ||||| Sbjct 3638 AAACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTA 3697 Query 155711 CCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCT 155770 || |||||||| | | | || |||||| | ||||| |||||||| || | |||| Sbjct 3698 GTTTTAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCT 3757 Query 155771 GGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACC 155830 || |||||| | ||| | || ||||| ||||| || || |||||||| ||||||| Sbjct 3758 GGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAATCTAAATGGTTTCAATTTCAACC 3817 Query 155831 AGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACC 155887 | |||||||| || |||| ||| || || ||| ||||| || ||| |||||| Sbjct 3818 AATCTGTAGTTGA---TAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACC 3874 Query 155888 GCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACC 155947 | ||| |||||||||||||| ||||| || ||||| ||||| || |||||||| |||| Sbjct 3875 GTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACC 3934 Query 155948 TTGCTGCTG 155956 | ||||||| Sbjct 3935 TAGCTGCTG 3943 >seq452 Length=65819 Score = 567 bits (628), Expect = 8e-157 Identities = 720/989 (73%), Gaps = 6/989 (1%) Strand=Plus/Minus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||| |||| | | || ||||| | || | || ||||| |||||| | | Sbjct 10756 TCTGCAACTGGATAACCAGTACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGA 10697 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||||| | | | | || || | || ||| | |||||||||||||| |||| Sbjct 10696 TGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTC 10637 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACA 155149 | ||||| |||||||||||||||||||| || |||| ||| || | || || ||||| | Sbjct 10636 CAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATA 10577 Query 155150 TCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTT 155209 | || || ||||| || | |||| ||| || || ||| | ||||| || || || | Sbjct 10576 TTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTGCACTTTTACCCAATCT 10517 Query 155210 GGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCT 155269 ||||||||||| | ||||||| ||||| ||||| |||||||||| |||| | || Sbjct 10516 GGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTC 10457 Query 155270 TCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTC 155329 | |||||| | | || | | ||| |||||| ||||||| ||| || |||| Sbjct 10456 TACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTT 10397 Query 155330 TTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTG 155389 | || ||||| |||||||| |||||| || || || || || | ||||| ||||| Sbjct 10396 TGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACCGCTG 10337 Query 155390 TATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCT 155449 | ||| | | || || | |||||||| ||| ||||||| |||||||| || || | Sbjct 10336 TTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTT 10277 Query 155450 CTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCT 155509 |||||||||| |||| ||| | || ||||| || || ||||| |||||||||||||| | Sbjct 10276 CTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCAT 10217 Query 155510 TCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTT 155569 | || ||| | || ||||| ||||| ||||| || || || ||| ||||||||| |||| Sbjct 10216 TTCATATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTT 10157 Query 155570 CATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTT 155629 | ||||| || ||| | ||| | ||||| || || | || ||| || | |||| Sbjct 10156 CCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 10097 Query 155630 ACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTC 155689 ||| ||||| ||||| |||||||||||||| || || ||||||||||| ||||| || | Sbjct 10096 ACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTACTTTGGCC 10037 Query 155690 GTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTG 155749 | | |||||||| ||||| ||||||||||| | | ||||||||| | |||| Sbjct 10036 GATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTG 9977 Query 155750 CATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACC 155809 | |||||||| || | |||||| |||||| | ||| | || ||||| ||||||| Sbjct 9976 CTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACCATGGCTTTCAACC 9917 Query 155810 TTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTA 155866 | || |||||||| |||||||| |||||||| || |||| || || || || Sbjct 9916 TAAATGGTTTCAATTTCAACCAATCTGTAGTTGA---TAGTCAAGGCCGTGTAATTAATA 9860 Query 155867 CATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACG 155926 | ||||| || || | ||||| ||| |||||||||||||| ||||| || ||||| | Sbjct 9859 CTTGGGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 9800 Query 155927 CTCACAACTTCCCTCTTGACCTTGCTGCT 155955 |||| ||||||||||| ||||| |||||| Sbjct 9799 CTCATAACTTCCCTCTAGACCTAGCTGCT 9771 >seq3541 Length=30046 Score = 210 bits (232), Expect = 3e-49 Identities = 263/360 (73%), Gaps = 7/360 (2%) Strand=Plus/Plus Query 155452 GGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTC 155511 |||||||| |||| ||| | || ||||| || || ||||| |||||||||||||| || Sbjct 15372 GGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 15431 Query 155512 CACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCA 155571 || ||| | || ||||| ||||| ||||| || || || ||| ||||||||| ||||| Sbjct 15432 CATATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCC 15491 Query 155572 TTGGTGACATCTTCACTAATCCGTG--AAACTACTGAGCAAGAGTCTCAGAACTATGGTT 155629 ||||| || ||| | ||| | | ||| || | || ||| || | |||| Sbjct 15492 TTGGTAACTTCTAGTTTGATCAGGGGGAAA-----GAAAATGAATCTGCTAATGAAGGTT 15546 Query 155630 ACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTC 155689 ||| ||||| ||||| ||| |||||||||| || || ||||||||||| ||||| || | Sbjct 15547 ACAGATTCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATGGTTACTTTGGCC 15606 Query 155690 GTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTG 155749 | | |||||||| ||||| ||||||||||| | | ||||||||||| |||| Sbjct 15607 GATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTG 15666 Query 155750 CATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACC 155809 | |||||||| || | |||||| |||||| | ||| | || ||||| ||||||| Sbjct 15667 CTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACCATGGCTTTCAACC 15726 >seq8266 Length=1953 Score = 136 bits (150), Expect = 5e-27 Identities = 226/324 (70%), Gaps = 22/324 (7%) Strand=Plus/Plus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||| |||| | | || ||||| | || | || ||||| |||||| | | Sbjct 841 TCTGCAACTGGATAACCAGTACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTT-TGA 899 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTC 155089 |||||| | ||| | | || || | || || |||| ||||||||||||| |||| Sbjct 900 TGATCC-TAACCTATTGACCGCAACTTC-TGTTTTATTG---CCTTCATTGCTGCTCCTC 954 Query 155090 CTGTAGACATTGATGGTATTCGTGAACCCGT--CG--------------CTGGTTCTTTA 155133 | ||||| |||||||||||||||||| |||| || |||| ||| || Sbjct 955 CAGTAGATATTGATGGTATTCGTGAAACCGTTTCGGATTGAACCTGTTTCTGGATCTCTA 1014 Query 155134 ATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTC 155193 | || || ||||| || || || ||||| || | |||| ||| || || ||| | Sbjct 1015 CTTTACGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATCGGTTTG 1074 Query 155194 CACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCT 155253 ||||| || || || |||||||||||| | ||||||| ||||| ||||| ||||||||| Sbjct 1075 CACTTTTACCCAATCTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCT 1134 Query 155254 TTCCAACTTGTAGTCTTCCACTTC 155277 | |||| | || | |||||| Sbjct 1135 TATGAACTAATTGTTCTACACTTC 1158 >seq112378 Length=4714 Score = 116 bits (128), Expect = 4e-21 Identities = 166/231 (72%), Gaps = 7/231 (3%) Strand=Plus/Plus Query 155410 GGTCAAGGTTCTTTCTC-TGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATAT 155468 |||||||| ||| || ||||| |||||||| || || ||||||||||| |||| || Sbjct 2512 GGTCAAGGAAGTTTTTCCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCAT 2571 Query 155469 GTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGC 155528 | | | ||||||| |||| |||| ||||||||| || || ||| | || ||||| Sbjct 2572 GATTATATTCCAAG-----CACAGCATCC-TATGCACCCATTTCATATGTTGGGTGTAGC 2625 Query 155529 AGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACT 155588 ||||| ||| |||| || || ||| || |||||| ||||| ||||| || ||| | Sbjct 2626 TGGTGTATTCAGTGGCTCCCTATTCAGTGTTATGCATGGTTCCTTGGTAACTTCTAGTTT 2685 Query 155589 AATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGG 155639 ||| | ||||| || | | || ||| || | |||||||| ||||| Sbjct 2686 GATCAGGGAAACCACATAAAATGAATCTGCTAATGAAGGTTACAAATTCGG 2736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583439812454560