Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq162968 123 5e-23 seq169900 109 1e-18 seq48530 105 1e-17 seq156471 104 5e-17 seq1864 104 5e-17 seq55212 96.9 7e-15 seq104136 95.1 2e-14 seq38014 93.3 8e-14 seq21302 93.3 8e-14 seq119584 87.8 4e-12 seq38015 84.2 4e-11 seq26240 84.2 4e-11 >seq162968 Length=322 Score = 123 bits (136), Expect = 5e-23 Identities = 138/183 (75%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| ||||| || | | |||||| |||| || | || || ||||||||||||| || Sbjct 90 GATGTTATA-TCTGCGAGTGTTCGCCCATCTTCTAGCTGCTTTCCAGCAAAGATTAGCCT 148 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 |||||||||||| || || ||||| || ||||| ||||| ||| || || || | Sbjct 149 CTGTTGATCAGGAGGAATCCCTTCCTTGTCTTGAATTTTTGCTTTGACGTTTTCAATTGT 208 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || ||||||||| ||||||||||| || || |||| ||||| | ||||||||| Sbjct 209 ATCCGAGCTTTCTACTTCAAGAGTAATGGTCTTCCCTGTTAGGGTTTTGACAAATATCTG 268 Query 192534 CAT 192536 ||| Sbjct 269 CAT 271 >seq169900 Length=516 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 192339 AGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACC 192398 ||| | |||||| ||| ||||| |||| | || || |||| || | |||||||| Sbjct 6 AGTTGACTCTTTTTGGATGTTATAGTCAGCAAGAGTACGACCATCTTCGAGCTGTTTACC 65 Query 192399 AGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTT 192458 ||||||||| | | ||| || ||||| || || |||||||| ||||| ||||| || Sbjct 66 AGCAAAGATGAGGCGCTGCTGGTCAGGCGGGATCCCTTCTTTGTCTTGAATTTTGGCCTT 125 Query 192459 TACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 192518 || || |||| || || ||| ||||| ||||| |||||||| ||||||| || Sbjct 126 CACGTTGTCGATAGTGTCGGAGCTTTCCACTTCAAGAGTGATGGTTTTTCCAGTTAGGGT 185 Query 192519 TTTAATAAATATCTGCAT 192536 || | ||||||||||| Sbjct 186 CTTGACGAATATCTGCAT 203 >seq48530 Length=6115 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| ||||| | | || || |||| || | |||||| ||||||||||||| || Sbjct 4010 GATATTGTAATCTGCCAGGGTACGACCATCTTCGAGTTGTTTTCCAGCAAAGATTAGCCT 4069 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||| || || |||||||| || ||||| || ||| ||| ||||| |||| Sbjct 4070 CTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGGATCTTAGCTTTGACATTGTCAATAGT 4129 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || || || |||||||| || || ||||| | || |||| ||| || || Sbjct 4130 GTCAGAGCTCTCAACCTCGAGAGTAATTGTCTTGCCAGTAAGAGTCTTAACAAAGATTTG 4189 Query 192534 CAT 192536 ||| Sbjct 4190 CAT 4192 >seq156471 Length=3476 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||| || | || | ||| | || | ||| || |||||| || ||| Sbjct 1673 ATTCCACCACGAAGGCGGAGGACAAGATGCAGGGTGGACTCCTTTTGGATATTGTAGTCA 1614 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | |||||| ||||||||||||| ||||| ||||| || Sbjct 1613 GCAAGGGTACGGCCATCTTCGAGTTGTTTTCCAGCAAAGATTAGCCTCTGCTGATCTGGA 1554 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || ||||| || ||| ||| ||||| || | || || || Sbjct 1553 GGAATTCCTTCCTTGTCTTGAATCTTAGCTTTGACATTGTCAATGGTGTCAGAGCTCTCA 1494 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || |||||||| || || ||||| | || |||| ||| || ||||| Sbjct 1493 ACCTCGAGAGTAATTGTCTTGCCAGTAAGGGTCTTAACAAAGATTTGCAT 1444 >seq1864 Length=9564 Score = 104 bits (114), Expect = 5e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| || | || |||||||| ||||| |||| ||| ||||| || || || ||||||| Sbjct 3220 CATCTTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGATCTGGAGGAATCCCTTCTT 3279 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | ||||| || || || |||||| || | ||||| || || || ||||| | Sbjct 3280 TGTCTTGAATCTTTGCCTTAACATTATCAATGGTGTCTGAACTCTCAACCTCCAGAGTTA 3339 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||||||||||| || | ||| |||||||| Sbjct 3340 TGGTTTTCCCAGTTAATGTCTTGACAAAGATCTGCAT 3376 Score = 95.1 bits (104), Expect = 2e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || |||||||| | || | || | ||| | || | ||| ||| || ||||| || || Sbjct 3375 ATCCCACCTCTCAATCGCAGCACGAGATGGAGGGTCGACTCCTTTTGA-ATATTGTAGTC 3433 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 | | ||||| |||| || | ||||| || |||||||| ||||| || ||||| || Sbjct 3434 CGCCAGTGTTCTGCCATCCTCAAGCTGTTTGCCTGCAAAGATCAATCTTTGCTGATCCGG 3493 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || ||||| || ||||| || || || |||||| || | ||||| || Sbjct 3494 AGGGATACCTTCCTTGTCTTGAATCTTTGCCTTCACATTATCGATGGTGTCTGAACTCTC 3553 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| ||||| || ||||| || || || | |||||||||||| Sbjct 3554 AACCTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTCACAAATATCTGCAT 3604 >seq55212 Length=5247 Score = 96.9 bits (106), Expect = 7e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| ||||| | | || || |||| || | |||||| ||||||||||| || | Sbjct 3648 GATATTGTAATCTGCCAGGGTGCGACCATCTTCGAGTTGTTTCCCAGCAAAGATCAAACG 3589 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||| ||||| || ||||| ||||| || || || || |||||| ||| | Sbjct 3588 CTGCTGATCCGGTGGAATCCCTTCCTTATCCTGAATCTTTGCCTTCACATTATCTATTGT 3529 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || || || || | ||| ||||| || || |||| || || | ||| ||||| Sbjct 3528 ATCCGAACTCTCCACCTCCAAAGTGATGGTCTTCCCTGTTAGAGTCTTGACAAAGATCTG 3469 Query 192534 CAT 192536 ||| Sbjct 3468 CAT 3466 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | | || || | ||| | ||| | ||| || ||||| |||||| Sbjct 3467 ATCCCACCTCTCAACCTCAAAACCAGATGAAGAGTCGACTCCTTCTGAATATTGTAATCA 3408 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || | |||| || | || || ||||||||||| || | |||||| || || Sbjct 3407 GCTAGCGTCCTCCCATCTTCTAGCTGCTTCCCAGCAAAGATCAAGCGCTGTTGGTCCGGA 3348 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| ||||| || || || || ||||| || | ||||| ||| Sbjct 3347 GGAATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTGTCAATCGTGTCTGAACTTTCA 3288 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || |||||||| || ||||| | || || | || |||||||| Sbjct 3287 ACTTCGAGTGTAATGGTCTTTCCAGTAAGAGTCTTCACGAAAATCTGCAT 3238 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | | || || | ||||| || | || || |||||| |||||| Sbjct 2986 ATCCCACCTCTCAACCTCAAAACCAGATGTAGGGTCGATTCCTTCTGGATATTGTAATCA 2927 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || ||||| | || || | ||| || ||||||||||| || | ||| || ||||| Sbjct 2926 GCTAGGGTTCGACCGTCCTCGAGTTGCTTCCCAGCAAAGATCAAACGCTGCTGGTCAGGA 2867 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| || | ||| || || Sbjct 2866 GGGATGCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTATCCGAGCTCTCA 2807 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| || || |||||||| || || | ||||| | ||| || |||||| Sbjct 2806 ACTTCAAGGGTGATGGTTTTTCCGGTGAGCGTTTTCACAAAAATTTGCATT 2756 >seq104136 Length=768 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| || || | || | || | ||||| || || ||||| ||||| Sbjct 389 ATCCCACCTCTGAGGCGGAGGACAAGGTGGAGAGTAGACTGCTTCTGTATATTGTAATCT 330 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | || |||||||||||||| | | ||| || ||| | Sbjct 329 GCAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCATGA 270 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| ||||| ||||| ||||| ||| |||||| || | || || || Sbjct 269 GGAATTCCCTCTTTGTCTTGGATTTTGGCTTTGACATTATCGATGGTGTCAGAACTCTCA 210 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||||||||| || ||||| | || || | ||| || ||||| Sbjct 209 ACTTCGAGAGTAATGGTCTTGCCAGTGAGCGTCTTGACAAAGATTTGCAT 160 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 192339 AGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACC 192398 ||||| ||| || |||||| ||||| | | || | |||| ||||||||||| || Sbjct 585 AGTAGACTCCTTTTGGATATTGTAATCCGCAAGGGTGCAACCATCCTCCAATTGTTTCCC 526 Query 192399 AGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTT 192458 | ||| || | | ||| || ||||| | || ||||| || || | || || ||| Sbjct 525 GGAAAATATCAGACGCTGCTGGTCAGGACGAATCCCTTCCTTGTCATTAATCTTTGCTTT 466 Query 192459 TACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGT 192518 |||||| || | ||| || ||| ||||| || |||||||| |||||||| | || Sbjct 465 TACATTCTCAATTGTATCAGAGCTTTCAACTTCCAGGGTAATGGTCTTACCAGTGAGGGT 406 Query 192519 TTTAATAAATATCTGCAT 192536 ||| | ||| || ||||| Sbjct 405 TTTGACAAAGATTTGCAT 388 >seq38014 Length=3548 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192306 AATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATC 192365 || |||||| | |||||| | || | || | ||| | ||| || |||||||||||| Sbjct 751 AACACCACCACGAAGACGAAGGACAAGGTGCAGAGTCGACTCCTTCTGGATATTATAATC 810 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | || || |||| |||| || || |||||||| || | ||||| ||||| || Sbjct 811 AGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCAGCAAATATCAGCCTCTGCTGATCCGG 870 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || || ||||| || || || || ||| |||||| || | || || || Sbjct 871 CGGAATGCCCTCTTTGTCCTGGATCTTCGCTTTCACATTATCAATCGTGTCCGAACTCTC 930 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||| |||||||| || || | || || | || |||||||| Sbjct 931 CACTTCCAAAGTGATGGTTTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 981 >seq21302 Length=5313 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||| || | || | ||| | || | ||| || ||||||||| ||| Sbjct 3769 ATTCCACCACGAAGGCGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATATTATAGTCA 3710 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || || |||| || | ||||| ||||||||||| | ||||| || || || Sbjct 3709 GCGAGGGTACGGCCATCTTCGAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGA 3650 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| || ||||| || | ||| || ||| Sbjct 3649 GGGATCCCTTCCTTGTCTTGGATTTTTGCCTTGACATTGTCAATTGTATCCGAACTTTCG 3590 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| || || || || || ||||| | || |||| || ||||||||| Sbjct 3589 ACTTCAAGGGTTATCGTCTTGCCAGTGAGAGTCTTAACGAAAATCTGCATT 3539 >seq119584 Length=3068 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405 ||||| |||||| ||||| | || |||| |||| |||||||||||||||||||| Sbjct 2347 TCTTTTTGGATATTGTAATCCGCCAAAGTTCTGCCATCTTCCAATTGTTTACCAGCAAAT 2288 Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446 || | ||||| || ||||| || |||||||||||||| || Sbjct 2287 ATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTATCCTG 2247 >seq38015 Length=2403 Score = 84.2 bits (92), Expect = 4e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || ||||| || || | ||| || || || || || | ||||| | | |||| ||| Sbjct 2191 ACCAAATGCAATGTCGACTCCTTCTGAATGTTGTAGTCCGCCAATGTCCTTCCATCTTCC 2250 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 | ||||| || ||||| || | ||||| ||||| || || |||||||||||||| || Sbjct 2251 AGCTGTTTGCCTGCAAAAATCAGCCTCTGCTGATCGGGAGGGATTCCTTCTTTATCCTGA 2310 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 || || || ||||| || | || || || ||||| ||||| || || || Sbjct 2311 ATCTTCGCCTTCACATTGTCGATTGTGTCGGAGCTCTCGACTTCCAGAGTGATCGTCTTC 2370 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||||| | || || ||||| Sbjct 2371 CCAGTTAGGGTTTTGACGAAGATTTGCAT 2399 >seq26240 Length=11166 Score = 84.2 bits (92), Expect = 4e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||| || | |||||| | || | || | |||| ||| || ||| || ||||||| Sbjct 8293 ACCCCCACGAAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGC 8352 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || | | |||| ||||| || || ||||||||||| || ||||| ||||| || || Sbjct 8353 CAGGGTCCTTCCATCCTCCAACTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGGGG 8412 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || || || ||||| || || || ||||| || | || || ||||| Sbjct 8413 AATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTGTCAATGGTGTCGGAGCTCTCTAC 8472 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || | ||| ||||| || || || | || || | ||| ||||||||| Sbjct 8473 CTCCAAAGTTATGGTCTTTCCTGTGAGGGTCTTGACAAAAATCTGCATT 8521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982072356942600