Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq38015 132 4e-26 seq38014 116 3e-21 seq53616 111 1e-19 seq1864 104 2e-17 seq164358 95.1 1e-14 seq63669 95.1 1e-14 seq26240 89.7 4e-13 seq105015 86.0 5e-12 seq55212 86.0 5e-12 seq21302 84.2 2e-11 >seq38015 Length=2403 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||| || |||||||| |||| || || || || || | ||| ||| ||| Sbjct 2399 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTC- 2341 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | | || || |||||| ||||||||||| | || ||||| Sbjct 2340 CGACACAATCGACAATGTGAAGGCGAAGATTCAGGATAAAGAAGGAATCCCTCCCGATCA 2281 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || |||| ||| || ||||||||||| || | | ||| ||||||||||||| Sbjct 2280 GCAGAGGCTGATTTTTGCAGGCAAACAGCTGGAAGATGGAAGGACATTGGCGGACTACAA 2221 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||||| |||||||| || ||||| |||| |||| |||| ||||||| Sbjct 2220 CATTCAGAAGGAGTCGACATTGCATTTGGTTCTGAGGCTGCGCGGGGGAA 2171 >seq38014 Length=3548 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||| || |||||||| |||| || || || || || | ||| ||| ||| Sbjct 1209 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTC- 1151 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | | || || ||||| ||||| ||||| | || ||||| Sbjct 1150 CGACACGATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAAGGAATCCCTCCCGATCA 1091 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || |||| ||| || || |||||||| || | | || ||||||||||||| Sbjct 1090 GCAGAGGCTGATTTTTGCAGGCAAGCAGCTGGAAGATGGAAGGACTTTGGCGGACTACAA 1031 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||||||| || ||||| ||||| |||| |||| || || Sbjct 1030 CATTCAAAAGGAGTCGACATTGCATTTGGTGCTGAGGCTGCGCGGCGG 983 >seq53616 Length=2978 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||| || |||||||| |||| || || || || || | ||| ||| ||| Sbjct 1525 ATGCAAATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAAGTCGAGAGCTC- 1583 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | | || || |||||| ||||| ||||| | || ||||| Sbjct 1584 CGACACGATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAAGGAATCCCTCCCGATCA 1643 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||||||| |||| || || || |||||||| || | | || ||||||||||||| Sbjct 1644 GCAGAGACTGATTTTCGCAGGCAAGCAGCTGGAAGATGGAAGGACTTTGGCGGACTACAA 1703 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||||||| || ||||| |||| | || |||| || || Sbjct 1704 CATTCAAAAGGAGTCGACATTGCATTTGGTTCTCAGGCTGCGCGGCGG 1751 >seq1864 Length=9564 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| || || || || || || ||||| || | || ||| | Sbjct 3604 ATGCAGATATTTGTGAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGAGTTCA 3545 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||||| || || ||||| | || ||||||| Sbjct 3544 GACACCATCGATAATGTGAAGGCAAAGATTCAAGACAAGGAAGGTATCCCTCCGGATCAG 3485 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | ||| || |||||||| ||||| | || |||| ||||||||||||| Sbjct 3484 CAAAGATTGATCTTTGCAGGCAAACAGCTTGAGGATGGCAGAACACTGGCGGACTACAAT 3425 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||||||||| || | || | ||| || ||||| |||| || Sbjct 3424 ATTCAAAAGGAGTCGACCCTCCATCTCGTGCTGCGATTGAGAGGTGG 3378 >seq164358 Length=318 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| ||||| || | || ||||| ||||| || |||| ||| | Sbjct 26 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTCTCGAGGTCGAGTCGTCG 85 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || || ||||| ||||| || ||| | || ||||||| Sbjct 86 GATACCATCGACAACGTCAAGTCCAAGATCCAGGATAAGGAGGGCATCCCTCCGGATCAG 145 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | ||||||||| |||||||| |||| || | | ||||||||| Sbjct 146 CAGCGCCTTATCTTTGCGGGTAAGCAGCTGGAAGACGGTCGCACGCTTTCCGACTACAAC 205 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || || ||||| ||| ||||| ||||| Sbjct 206 ATACAGAAAGAGTCGACGCTGCACTTGGTG 235 >seq63669 Length=360 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || ||||| |||| || |||||||| ||| ||||| || | Sbjct 104 ATGCAGATCTTCGTGAAAACCCTAACTGGAAAAACCATCACCCTCGAAGTTGAAAGTTCG 163 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | | ||||| ||| ||| ||||| ||||| | ||| |||||| Sbjct 164 GATACTATTGACAATGTAAAGGCAAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAG 223 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | || || | ||| || || ||||| || |||| | || | || ||||||||| Sbjct 224 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAAGACGGCCGTACTCTTGCTGACTACAAC 283 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 |||||||| ||||| || | ||| ||||| Sbjct 284 ATTCAAAAAGAGTCAACCCTTCACTTGGTG 313 >seq26240 Length=11166 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| |||||| | || || || ||||| ||| |||| |||| ||| Sbjct 9323 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAGAGCTC- 9265 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | | || || ||||| || || ||||| | ||| ||| || Sbjct 9264 CGACACCATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCCCCGGACCA 9205 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | || | || || |||||||| ||||||| | || | || |||||||| Sbjct 9204 GCAGAGGTTGATCTTCGCCGGCAAACAGCTCGAGGACGGCCGCACCCTTGCCGACTACAA 9145 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||| || |||||||| || | ||| ||||| Sbjct 9144 CATCCAGAAGGAGTCCACTCTCCACTTGGTG 9114 >seq105015 Length=404 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| || | || ||||| ||||| || | || ||| | || Sbjct 26 ATGCAAATTTTCGTCAAGACGCTCACCGGCAAGACCATCACATTGGAGGTTGAGTCCAGC 85 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| ||||| || || | || || ||| Sbjct 86 GACACGATCGATAACGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGACCAG 145 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | |||||| || ||| |||| |||| || | ||||||||||| Sbjct 146 CAGCGTCTTATCTTTGCGGGCAAGCAGTTGGAAGACGGTCGCACGCTTTCGGACTACAAC 205 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| |||||||| ||| ||||| ||||| Sbjct 206 ATTCAGAAGGAGTCGACGCTGCACTTGGTG 235 >seq55212 Length=5247 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 ||||||||||||||| ||||| | || || |||||||| ||| | ||| ||| ||| Sbjct 2756 AATGCAAATTTTTGTGAAAACGCTCACCGGAAAAACCATCACCCTTGAAGTTGAGAGCTC 2815 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 | ||||| ||| | | || || |||||| || || |||||| | || || | Sbjct 2816 G-GATACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACC 2874 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||| | | || | ||| || || || || ||||||| ||| | || || |||| Sbjct 2875 AGCAGCGTTTGATCTTTGCTGGGAAGCAACTCGAGGACGGTCGAACCCTAGCTGATTACA 2934 Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 | || || ||||| || || | || |||| ||||| ||| |||| || Sbjct 2935 ATATCCAGAAGGAATCGACCCTACATCTGGTTTTGAGGTTGAGAGGTGG 2983 >seq21302 Length=5313 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| |||||||| || || || || || || ||||| || | || ||| ||| Sbjct 3996 ATGCAGATTTTTGTGAAGACCTTGACTGGAAAGACCATCACTTTGGAGGTTGAGAGCTC- 4054 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || |||| | | || || || || || || ||||| | || |||||| Sbjct 4055 CGACACAGTCGACAATGTTAAGGCGAAAATACAAGACAAGGAAGGGATCCCTCCGGATCA 4114 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | || | ||| || |||||||| || || | || ||| ||||||| ||||| Sbjct 4115 GCAGAGGTTGATCTTTGCAGGCAAACAGCTTGAAGATGGCAGAACGCTGGCGGATTACAA 4174 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| |||||||| || || | || | ||| || || || |||| || Sbjct 4175 CATACAAAAGGAATCGACCCTTCATCTTGTGCTGCGACTGAGAGGTGG 4222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397948892401564