Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq156471 96.9 5e-15 seq51605 84.2 3e-11 >seq156471 Length=3476 Score = 96.9 bits (106), Expect = 5e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 146115 AAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAA 146174 ||||| ||| || ||||| || || || ||||| |||||| | ||||||||||| ||| Sbjct 1984 AAAATCCAAGACAAGGAAGGTATCCCTCCGGATCAGCAAAGATTGATTTTTGCAGGCAAA 2043 Query 146175 CAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCAT 146234 ||| | || ||| ||||| | | ||||| || ||||||||||||||||| | ||| Sbjct 2044 CAACTCGAGGATGGCAGAACACTGGCGGATTACAACATACAAAAAGAATCGACCCTTCAT 2103 Query 146235 TTAGTATTACGATTAAGAGGAGG 146257 | || | ||||| ||||| || Sbjct 2104 CTTGTGCTGCGATTGAGAGGTGG 2126 >seq51605 Length=8292 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 146126 TAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGA 146185 ||||||||||||||| || || || || || || || ||||| |||||||| || || || Sbjct 6689 TAAAGAAGGCATTCCTCCTGACCAGCAGAGGCTAATATTTGCCGGTAAACAGTTGGAAGA 6630 Query 146186 TAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||| || || ||||||| || || || |||||||| || | || | || || | Sbjct 6629 TGGTAGGACCTTGGCAGATTACAACATCCAGAAAGAATCAACACTTCACCTTGTTTTGAG 6570 Query 146246 ATTAAGAGGAGGTA 146259 | | || ||||||| Sbjct 6569 ACTTAGGGGAGGTA 6556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784290646277920