Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq165807 569 6e-158 seq452 553 5e-153 seq3541 221 4e-53 seq8266 95.1 4e-15 >seq165807 Length=4432 Score = 569 bits (630), Expect = 6e-158 Identities = 707/961 (74%), Gaps = 8/961 (1%) Strand=Plus/Plus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 |||||||||||| |||| |||||||| |||||||||| | | | | || || Sbjct 2983 AACCGTCTTTATATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACCGCAACT 3042 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || |||||||| || || ||||| ||||||||||| || || || Sbjct 3043 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGACATTGATGGTATTCGTGA 3101 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 |||||| ||||| ||| || ||||||||||| ||||| || || ||| | | || | Sbjct 3102 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTAC 3161 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || || || || | ||||| |||||||| |||||||| || |||||||| Sbjct 3162 TTCTGCG--GCTATAGGGTTGCACTTTTACCCAATATGGGAAGCGGCATCCGTTGATGAA 3219 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | |||||||| || || | | || | || | |||||| | |||| || | Sbjct 3220 TGGTTATACAACGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCT 3279 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||||||||| || |||||||||||||| | || || || ||| | || |||||| | Sbjct 3280 TGTTACATGGGGCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCT 3339 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || || ||||| |||| |||||| | | || ||| ||||| Sbjct 3340 GTTGCATATTCAGCTCCTGTTGCGGCGGCTACTGCTGTTTTCTTGATTTATCCAATCGGT 3399 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| |||| || | ||||||| | || || || || || || |||| ||| | Sbjct 3400 CAAGGAAGTTTTTCGGATGGGATGCCTCTAGGAATCTCTGGTACTTTTAACTTTATGATT 3459 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || ||||| || || || ||||| || |||||||| || |||||| | ||||| ||||| Sbjct 3460 GTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGT 3519 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || ||||| ||||| ||||| ||||| ||||| ||||| | || || || | | ||| Sbjct 3520 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTC-TAGTTTGAT 3578 Query 29257 C-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | | || || || ||| | ||| || | ||||||| ||||| ||||| ||||| Sbjct 3579 CAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGA 3638 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 |||||||| |||||||||||||| ||||| ||||| || |||||||||||||||||| Sbjct 3639 AACTTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAG 3698 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 ||| || || |||||| |||| |||||| | ||||| ||||| || ||||| || || Sbjct 3699 TTTTAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTG 3758 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 |||| |||| || || || || ||||| || ||||| || ||||| || || ||||| Sbjct 3759 GTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAATCTAAATGGTTTCAATTTCAACCA 3818 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | |||||||| |||||||| ||||||||| || | || || || Sbjct 3819 ATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGC 3878 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 |||||| || | ||||| |||||||| |||||||||||||| ||||| || || || || Sbjct 3879 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGC 3938 Query 29616 T 29616 | Sbjct 3939 T 3939 >seq452 Length=65819 Score = 553 bits (612), Expect = 5e-153 Identities = 707/967 (73%), Gaps = 8/967 (1%) Strand=Plus/Minus Query 28654 ACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 28713 ||| | ||||||||||| |||| |||||||| ||||||| || | || ||| Sbjct 10736 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGAC 10678 Query 28714 GCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCAT 28772 || | |||| || |||||||| |||||||| || || ||||| || |||||||| || Sbjct 10677 CGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTAT 10618 Query 28773 CCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGT 28832 || |||||||| ||||| ||| || || |||||||| || || || || ||| | | Sbjct 10617 TCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCAGGTGCCATTAT 10558 Query 28833 ACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTT 28890 || | | ||| || ||||| | ||||| |||||||| |||||||| || || Sbjct 10557 TCCTACTTCTGCA--GCTATCGGTTTGCACTTTTACCCAATCTGGGAAGCAGCATCCGTT 10500 Query 28891 GATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGC 28950 ||||||||| | |||||||| || || | |||| | || | |||||| | |||| Sbjct 10499 GATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGT 10440 Query 28951 GTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGG 29010 || | ||||||||| || |||||||| ||||| | || | || ||| | || ||| Sbjct 10439 GTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTTTGGGTATGCGCCCTTGG 10380 Query 29011 ATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCA 29070 ||| ||| || || |||||||| || ||||| || | || |||||| | |||||||| Sbjct 10379 ATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATCTACCCA 10320 Query 29071 TTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTAC 29130 | |||||||| |||| || | |||||| | || ||||| || || ||||||| | Sbjct 10319 ATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTC 10260 Query 29131 ATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTT 29190 ||| | || ||||| || || || ||||| || |||||||| || || ||| | || || Sbjct 10259 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCATATGTTAGGTGTA 10200 Query 29191 GCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCG 29250 ||||| || ||||| ||||| ||||| ||||| ||||| ||||| | || || || | | Sbjct 10199 GCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTC-TAG 10141 Query 29251 CTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGA 29309 ||| | | || || || ||| | ||| || | ||||||| || || ||||| Sbjct 10140 TTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGA 10081 Query 29310 AGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATA 29369 ||||| |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| Sbjct 10080 GGAAGAAACTTATAATATCGTAGCTGCTCATGGTTACTTTGGCCGATTGATCTTCCAATA 10021 Query 29370 TGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGG 29429 |||| |||||| || ||||| ||||||||||| | ||||| ||||| || ||||| Sbjct 10020 TGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGG 9961 Query 29430 GATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTT 29489 || |||||| |||| || || | || ||||| || || || || ||||| || || Sbjct 9960 TATCTGGTTCACTGCTTTAGGTATCAGCACCATGGCTTTCAACCTAAATGGTTTCAATTT 9901 Query 29490 TAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAA 29549 ||||| || | | || | | || ||||| |||||||||||||||||| | |||| Sbjct 9900 CAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTGGGCTGATATCATCAA 9841 Query 29550 TCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGA 29609 || |||||||| || | ||||| |||||||| |||||||||||||||||||| || || Sbjct 9840 CCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 9781 Query 29610 TCTGGCT 29616 || ||| Sbjct 9780 CCTAGCT 9774 >seq3541 Length=30046 Score = 221 bits (244), Expect = 4e-53 Identities = 252/336 (75%), Gaps = 3/336 (1%) Strand=Plus/Plus Query 29115 AGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTT 29174 ||| || ||||||| |||| | || ||||| || || || ||||| || |||||||| || Sbjct 15371 AGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATT 15430 Query 29175 CCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTC 29234 || ||| | || || ||||| || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 15431 TCATATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC 15490 Query 29235 GCTTGTCACGTCCTCGCTTGTGCGTGAGACGACTGAAGACATCTCTCAGAACTATGGTTA 29294 | || || || | | ||| | | | || ||| | ||| || | ||||| Sbjct 15491 CTTGGTAACTTC-TAGTTTGATCAGGGG--GAAAGAAAATGAATCTGCTAATGAAGGTTA 15547 Query 29295 CAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACG 29354 || || || ||||| ||| | |||||||| |||||||| ||||| ||||||||||| || Sbjct 15548 CAGATTCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATGGTTACTTTGGCCG 15607 Query 29355 TTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGC 29414 |||||||||||||||||| |||||| || ||||| ||||||||||||| ||||| Sbjct 15608 ATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCCTAGCTGC 15667 Query 29415 CTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGG 29450 ||||| || ||||| || |||||| |||| || || Sbjct 15668 TTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGG 15703 >seq8266 Length=1953 Score = 95.1 bits (104), Expect = 4e-15 Identities = 221/332 (67%), Gaps = 26/332 (8%) Strand=Plus/Plus Query 28654 ACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 28713 ||| | ||||||||||| |||| |||||||| ||||||| | | | ||| Sbjct 861 ACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTT-TGATGATCC--TAACCTATTGAC 917 Query 28714 GCCACCATCTGCTTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATC 28773 || | |||| || |||||| |||||||| || || ||||| || |||||||| || Sbjct 918 CGCAACTTCTGTTT---TATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATT 974 Query 28774 CGCGAA----------------CCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCAT 28817 || ||| ||||| ||||| ||| || || |||||||| || || Sbjct 975 CGTGAAACCGTTTCGGATTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTAT 1034 Query 28818 ATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 28875 || || ||| | | || | | ||| || ||||| | ||||| |||||||| ||| Sbjct 1035 TTCAGGTGCCATTATTCCTACTTCTGCA--GCTATCGGTTTGCACTTTTACCCAATCTGG 1092 Query 28876 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 28935 ||||| || ||||||||||| | |||||||| || || | |||| | || | Sbjct 1093 GAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTA 1152 Query 28936 CACTTCCTCATTGGCGTCTATGCTTACATGGG 28967 |||||| | |||| || | ||||||||| Sbjct 1153 CACTTCTTACTTGGTGTAGCTTGTTACATGGG 1184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146333160051096