Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq452 623 3e-174 seq165807 590 2e-164 seq3541 226 8e-55 seq8266 134 4e-27 >seq452 Length=65819 Score = 623 bits (690), Expect = 3e-174 Identities = 729/975 (75%), Gaps = 10/975 (1%) Strand=Plus/Minus Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790 ||||| |||||||||| || ||||||||||| || || |||||||| ||||||| | Sbjct 10750 ACTGGATAACCAGTACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCC 10691 Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848 | | || ||| | || ||| | ||| || |||||||||||||||||||| ||||| || Sbjct 10690 C-TACCTTATTGACCGCAACT-TCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGT 10633 Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908 ||| |||||||| || || || |||||| | || ||| ||||| |||||||| || || Sbjct 10632 AGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTAT 10573 Query 18909 ATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966 || || ||| | |||| | | ||| || ||||| | ||||| |||||||| ||| Sbjct 10572 TTCAGGTGCCATTATTCCTACTTCTGCA--GCTATCGGTTTGCACTTTTACCCAATCTGG 10515 Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTC 19026 ||||| || ||||||||||| | |||||||| || || | |||| | || | Sbjct 10514 GAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTA 10455 Query 19027 CACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTA 19086 |||||| | |||| || | ||||||||| || |||||||| ||||| | || | Sbjct 10454 CACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAGCTTAGTTTCCGTTTG 10395 Query 19087 GGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTC 19146 || ||||||||||||||| |||||| || |||||||||||||| || || | || || Sbjct 10394 GGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACCGCTGTT 10335 Query 19147 TTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGT 19206 ||| | |||| ||| |||||||||| ||| || | ||||||| | || ||| | Sbjct 10334 TTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATTTCT 10275 Query 19207 GGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTC 19266 ||||| ||||||| |||| |||||||||||||||| || |||||||| |||||||| || Sbjct 10274 GGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 10215 Query 19267 CACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCG 19326 || ||| | ||||| |||||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct 10214 CATATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC- 10156 Query 19327 CTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTA 19385 |||| || | || | ||| | | ||||| || ||| | | |||| || | || || Sbjct 10155 CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTA 10096 Query 19386 CAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCG 19445 || || || ||||| ||||| |||||||| || || ||||||||||| || ||||| || Sbjct 10095 CAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTACTTTGGCCG 10036 Query 19446 GCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGC 19505 | || ||||| || || |||||||| ||||| |||| ||||| || ||||| Sbjct 10035 ATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGC 9976 Query 19506 TTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTT 19565 ||||||||| || || || ||||| | || | || | ||||||||||| |||||| | Sbjct 9975 TTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACCATGGCTTTCAACCT 9916 Query 19566 GAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTG 19625 ||||| || || || ||||| || | |||| | | || ||||| ||| ||||||| Sbjct 9915 AAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGCCGTGTAATTAATACTTG 9856 Query 19626 GGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCA 19685 |||||| || |||| ||||||||||| || | || || ||||| |||||||||||||| Sbjct 9855 GGCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCA 9796 Query 19686 TAACTTCCCACTTGA 19700 ||||||||| || || Sbjct 9795 TAACTTCCCTCTAGA 9781 >seq165807 Length=4432 Score = 590 bits (654), Expect = 2e-164 Identities = 724/981 (74%), Gaps = 8/981 (1%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| | ||| ||||||| || || |||||||||||||| || |||||||| || Sbjct 2956 TTCTGTAATTGGATAACCAGCACTGAAAACCGTCTTTATATTGGATGGTTTGGTGTTTTG 3015 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842 |||||||| | | | | || ||| | ||| || ||||| || ||||||||||| || Sbjct 3016 ATGATTCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCCC 3074 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| |||||||||||||| || || || |||||| | || ||| |||||||||||||| Sbjct 3075 TCCAGTAGACATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 3134 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCA 18960 ||||| || || ||| | |||| | | || || || || | ||||| |||||| Sbjct 3135 TATCATTTCTGGTGCCATTATTCCTACTTCTGCG--GCTATAGGGTTGCACTTTTACCCA 3192 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 || |||||||| || ||||||||||| | |||||||| || || | | || | Sbjct 3193 ATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAGCTAATT 3252 Query 19021 GTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTAT 19080 || | |||||| | |||| || | ||||||||| || |||||||||||||| | Sbjct 3253 GTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGGCGTGAGTGGGAACTTAGTTTC 3312 Query 19081 CGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCT 19140 || || || ||||| ||||||||| |||||| || |||||||||||||| || || || Sbjct 3313 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCGGCTACT 3372 Query 19141 GCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGT 19200 || || ||| | | |||||| | |||||||| ||| || | |||||| | || Sbjct 3373 GCTGTTTTCTTGATTTATCCAATCGGTCAAGGAAGTTTTTCGGATGGGATGCCTCTAGGA 3432 Query 19201 ATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCAC 19260 || |||||| || |||| ||| |||||||||||||||| || |||||||| |||||| Sbjct 3433 ATCTCTGGTACTTTTAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 3492 Query 19261 CCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCAC 19320 || || |||||| | || || |||||||| |||||||| || ||||| ||||| ||||| Sbjct 3493 CCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 3552 Query 19321 GGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTA 19379 ||||| | || || | || | ||| | | ||||| || ||| | | |||| || | Sbjct 3553 GGTTCTTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 3611 Query 19380 TGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTT 19439 || |||| ||||| ||||| ||||| |||||||| || || || |||||||| ||||| Sbjct 3612 AGGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATCGTAGCCGCTCATGGTTATTT 3671 Query 19440 TGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTT 19499 ||| || | || ||||| || || || ||||| |||||| |||||||||| || Sbjct 3672 TGGCCGATTGATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACATTTCTTCTT 3731 Query 19500 GGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATT 19559 |||||||||||||| || || || ||||| | || | || | ||||| ||||| || Sbjct 3732 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTT 3791 Query 19560 CAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGA 19619 ||| | ||||| || || || ||||| || | |||| | | |||||||| ||| | Sbjct 3792 CAATCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAA 3851 Query 19620 TACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAA 19679 ||| |||||||| ||| | || ||||||||||| || | || || ||||| |||||||| Sbjct 3852 TACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 3911 Query 19680 TGCTCATAACTTCCCACTTGA 19700 ||||||||| ||||| || || Sbjct 3912 TGCTCATAATTTCCCTCTAGA 3932 >seq3541 Length=30046 Score = 226 bits (250), Expect = 8e-55 Identities = 271/366 (74%), Gaps = 9/366 (2%) Strand=Plus/Plus Query 19201 ATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCAC 19260 |||| ||||| ||||||| |||| |||||||||||||||| || |||||||| |||||| Sbjct 15366 ATTATAGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 15425 Query 19261 CCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCAC 19320 || || || ||| | ||||| |||||||| |||||||| || ||||| ||||| ||||| Sbjct 15426 CCATTTCATATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 15485 Query 19321 GGTTCGCTTGTTACGTCCTCGCTTG---TGCGTGAAACTACTGAAGAGGTATCTCAGAAC 19377 ||||| |||| || | || | ||| | | |||| ||| | | |||| || Sbjct 15486 GGTTC-CTTGGTAACTTCTAGTTTGATCAGGGGGAAA-----GAAAATGAATCTGCTAAT 15539 Query 19378 TATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTAT 19437 | || |||| || || ||||| ||| | |||||||| || || ||||||||||| || Sbjct 15540 GAAGGTTACAGATTCGGTCAAGAGGAATAAACTTATAATATCGTAGCTGCTCATGGTTAC 15599 Query 19438 TTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTT 19497 ||||| || | || ||||| || || |||||||| ||||| |||| ||||| Sbjct 15600 TTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTC 15659 Query 19498 TTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCA 19557 | |||||||||||||| || || || ||||| | || | || | ||||||||||| Sbjct 15660 CTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACCATGGCT 15719 Query 19558 TTCAAC 19563 |||||| Sbjct 15720 TTCAAC 15725 >seq8266 Length=1953 Score = 134 bits (148), Expect = 4e-27 Identities = 239/346 (69%), Gaps = 26/346 (8%) Strand=Plus/Plus Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790 ||||| |||||||||| || ||||||||||| || || |||||||| ||||||| | Sbjct 847 ACTGGATAACCAGTACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTT-TGATGAT-C 904 Query 18791 CGTGTCTCCTTGCAGCTACTATTTGTTTCATTATTGCCTTCATTGCTGCACCTCCTGTAG 18850 | || | | || ||| | ||||| |||||||||||||||||| ||||| |||| Sbjct 905 CTAACCTATTGACCGCAACT-TCTGTTT---TATTGCCTTCATTGCTGCTCCTCCAGTAG 960 Query 18851 ACATTGATGGCATCCG----------------CGAGCCTGTTGCAGGCAGTCTTCTTTAT 18894 | |||||||| || || || |||||| | || ||| ||||| Sbjct 961 ATATTGATGGTATTCGTGAAACCGTTTCGGATTGAACCTGTTTCTGGATCTCTACTTTAC 1020 Query 18895 GGAAACAACATCATATCGGGAGCCGTCGTTCCGA--GCAGCAATGCCATCGGACTACACT 18952 |||||||| || || || || ||| | |||| | | ||| || ||||| | |||| Sbjct 1021 GGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCA--GCTATCGGTTTGCACT 1078 Query 18953 TCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCC 19012 | |||||||| |||||||| || ||||||||||| | |||||||| || || | Sbjct 1079 TTTACCCAATCTGGGAAGCAGCATCCGTTGATGAATGGTTATACAACGGTGGTCCTTATG 1138 Query 19013 AACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGG 19058 |||| | || | |||||| | |||| || | ||||||||| Sbjct 1139 AACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGG 1184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140828864719608