Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq63669 120 3e-22 seq169900 107 2e-18 seq109020 102 8e-17 seq164358 93.3 4e-14 seq38015 93.3 4e-14 seq76882 91.5 1e-13 seq21302 89.7 5e-13 seq185014 84.2 2e-11 seq55212 84.2 2e-11 seq53616 82.4 7e-11 >seq63669 Length=360 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | ||||||||||||||||||||||||| | ||||| ||||| Sbjct 312 ACCAAGTGAAGGGTTGACTCTTTTTGAATGTTGTAGTCAGCAAGAGTACGGCCGTCTTCA 253 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| ||||| || |||||||| || || ||||| ||||| | Sbjct 252 AGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGGGGGATTCCTTCCTTATCTTGA 193 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 |||||| || | | || | |||||| | || ||||||| || | ||||| Sbjct 192 ATTTTTGCCTTTACATTGTCAATAGTATCCGAACTTTCAACTTCGAGGGTGATGGTTTTT 133 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || ||||| | ||| |||||||| Sbjct 132 CCAGTTAGGGTTTTCACGAAGATCTGCAT 104 >seq169900 Length=516 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | ||||||||||||||||||||||||| | || || |||||| Sbjct 223 ACCAAGTGAAGAGTTGACTCTTTTTGAATGTTGTAGTCAGCAAGAGTGCGGCCATCTTCA 282 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| |||| ||||| ||||| || || || ||||||||||| || | Sbjct 283 AGCTGCTTTCCGGCGAAGATCAGACGTTGTTGGTCAGGGGGGATGCCTTCTTTGTCTTGA 342 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| |||| | || | |||||||| || ||||||| || | ||||| Sbjct 343 ATTTTGGCCTTCACGTTATCAATAGTATCGGAGCTTTCGACTTCGAGGGTGATGGTTTTT 402 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| | ||| || ||||| Sbjct 403 CCGGTTAGGGTTTTAACGAAGATTTGCAT 431 Score = 105 bits (116), Expect = 6e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||||||||| ||||| ||||| | ||||| |||||||||||||||||| | Sbjct 8 TTGACTCTTTTTGGATGTTATAGTCAGCAAGAGTACGACCATCTTCGAGCTGTTTACCAG 67 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | |||| || ||||| || || || || || |||||||| || |||||| |||| Sbjct 68 CAAAGATGAGGCGCTGCTGGTCAGGCGGGATCCCTTCTTTGTCTTGAATTTTGGCCTTCA 127 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | ||| |||| |||||||| | || | ||||| ||||| || || | Sbjct 128 CGTTGTCGATAGTGTCGGAGCTTTCCACTTCAAGAGTGATGGTTTTTCCAGTTAGGGTCT 187 Query 132108 TTATGAAAATCTGCAT 132123 | | ||| |||||||| Sbjct 188 TGACGAATATCTGCAT 203 >seq109020 Length=336 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||||||| || ||| || ||| || ||||| || |||| Sbjct 248 GACTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGGCCATCCTCAAGCTGCTTGCCGGCG 189 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| |||||||| || |||||||| || || || || || | Sbjct 188 AAGATCAGGCGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTGACG 129 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||||| | ||| ||||||| || | || || || |||||||| ||| Sbjct 128 TTGTCAATGGTATCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTT 69 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 68 ACGAAGATCTGCAT 55 >seq164358 Length=318 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || |||||||||||| | || || ||||| ||||| ||||| | | Sbjct 219 GACTCTTTCTGTATGTTGTAGTCGGAAAGCGTGCGACCGTCTTCCAGCTGCTTACCCGCA 160 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| ||||| ||||| ||||| || ||||| || || || | Sbjct 159 AAGATAAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTATCCTGGATCTTGGACTTGACG 100 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | || ||| || |||| || | || || |||||||| || || Sbjct 99 TTGTCGATGGTATCCGACGACTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGGGTCTTG 40 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 39 ACGAAAATCTGCAT 26 >seq38015 Length=2403 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| | || ||||||||| | | ||||| || |||||||||||||| || || Sbjct 2179 CGCAGCCTCAGAACCAAATGCAATGTCGACTCCTTCTGAATGTTGTAGTCCGCCAATGTC 2238 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 | |||||| |||||||| || | | | || || | ||| ||||| ||||| || ||| Sbjct 2239 CTTCCATCTTCCAGCTGTTTGCCTGCAAAAATCAGCCTCTGCTGATCGGGAGGGATTCCT 2298 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 |||||||| ||| || |||| | || | || |||| ||| ||||| | Sbjct 2299 TCTTTATCCTGAATCTTCGCCTTCACATTGTCGATTGTGTCGGAGCTCTCGACTTCCAGA 2358 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||| || ||||| || ||||| | ||| || ||||| Sbjct 2359 GTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATTTGCAT 2399 >seq76882 Length=309 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 131936 TTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGATT 131995 || |||||||||||||| | || ||| ||||||||||||||| |||| | | || Sbjct 308 TTCTGAATGTTGTAGTCAGCAAGAGTGCGCCCATCTTCGAGCTGTTTTCCGGCAAATATA 249 Query 131996 AGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCC 132055 || ||||| || || ||||| ||||||||||| || ||||||| || | | || Sbjct 248 AGGCGCTGCTGGTCAGGAGGGATGCCTTCTTTGTCTTGAATTTTTGCCTTGACGTTGTCA 189 Query 132056 ACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAA 132115 | ||| || | || ||||||| || | ||||| || || || ||||| | || Sbjct 188 ATAGTGTCAGAGCTTTCGACTTCGAGGGTGATTGTTTTCCCGGTGAGGGTTTTGACAAAG 129 Query 132116 ATCTGCAT 132123 |||||||| Sbjct 128 ATCTGCAT 121 >seq21302 Length=5313 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | || | ||| | | | ||||| ||||| || || ||||| | ||| Sbjct 3761 ACGAAGGCGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATATTATAGTCAGCGAGGGT 3702 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||||||||||||||| || | | |||| || | ||| || |||||||| || || Sbjct 3701 ACGGCCATCTTCGAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGGATCCC 3642 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || |||||| || | | || | ||||| | || ||||| | Sbjct 3641 TTCCTTGTCTTGGATTTTTGCCTTGACATTGTCAATTGTATCCGAACTTTCGACTTCAAG 3582 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||| || ||||| ||||| || | |||||||||||| Sbjct 3581 GGTTATCGTCTTGCCAGTGAGAGTCTTAACGAAAATCTGCAT 3540 >seq185014 Length=332 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 131968 ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTT 132027 |||||||||||| || |||| | |||| || ||||| || || || || ||||||||||| Sbjct 329 ATCTTCGAGCTGCTTTCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGGATGCCTTCTTT 270 Query 132028 ATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAG 132087 || |||||| |||| | || | ||| |||| || ||||| | || | Sbjct 269 GTCTTGAATTTTGGCCTTCACATTATCGATAGTGTCGGAGCTTTCGACTTCTAGGGTGAT 210 Query 132088 CGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACTT 132128 ||||| || || || ||||||| || ||||||||| ||| Sbjct 209 GGTTTTCCCGGTTAGGGTTTTTACAAAGATCTGCATGGCTT 169 >seq55212 Length=5247 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTAC 131963 ||| | |||||||| ||| | | ||||| || ||||| ||||| || ||| | || | Sbjct 3456 CAACCTCAAAACCAGATGAAGAGTCGACTCCTTCTGAATATTGTAATCAGCT-AGCGTCC 3398 Query 131964 GCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTT 132023 | |||||| ||||| || || | | |||| | |||||||| || ||||| || |||| Sbjct 3397 TCCCATCTTCTAGCTGCTTCCCAGCAAAGATCAAGCGCTGTTGGTCCGGAGGAATTCCTT 3338 Query 132024 CTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCG 132083 | ||||| ||| ||| || | | || | || || | || ||||||| | Sbjct 3337 CCTTATCCTGAATCTTTGCCTTGACATTGTCAATCGTGTCTGAACTTTCAACTTCGAGTG 3278 Query 132084 TCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | | || || ||||| ||||| || | |||||||||||| Sbjct 3277 TAATGGTCTTTCCAGTAAGAGTCTTCACGAAAATCTGCAT 3238 >seq53616 Length=2978 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | ||||| ||||||||||||||||| || || | |||||| Sbjct 1734 AACCAAATGCAATGTCGACTCCTTTTGAATGTTGTAGTCCGCCAAAGTCCTTCCATCTTC 1675 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || || | | || || | ||| ||||| ||||| || ||||| ||||| Sbjct 1674 CAGCTGCTTGCCTGCGAAAATCAGTCTCTGCTGATCGGGAGGGATTCCTTCCTTATCCTG 1615 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || |||| | || | || |||| ||| ||||| | || | ||| || Sbjct 1614 AATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCGACTTCCAGAGTGATCGTCTT 1555 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || ||||| | ||| || ||||| Sbjct 1554 CCCAGTTAGGGTTTTGACGAAGATTTGCAT 1525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475474029507360