Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11]
190,876 sequences; 353,287,234 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq26240 129 4e-25
seq1108 123 2e-23
seq48530 122 5e-23
seq21302 122 5e-23
seq169900 118 7e-22
seq38015 116 2e-21
seq38014 116 2e-21
seq76882 114 8e-21
seq63669 113 3e-20
seq1864 113 3e-20
seq156471 111 1e-19
seq55212 107 1e-18
>seq26240
Length=11166
Score = 129 bits (142), Expect = 4e-25
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||| ||||||||| |||||| || ||||| || || | ||| || || |||| ||
Sbjct 9114 CACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTC 9173
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
|| ||||| ||||| || || || | ||| |||||||| || | ||| ||||||||
Sbjct 9174 GAGCTGTTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCTTCCTTGTCCTG 9233
Query 34617 GATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|||||| | || ||| | || ||||| ||||||||| || | ||| || || |
Sbjct 9234 GATCTTA-GCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCT 9292
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGT 34715
| ||||| | ||||||||||| |||||||| | |||||
Sbjct 9293 TTCCGGTGAGAGTTTTCACAAAGATCTGCATCTGTATTGT 9332
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | || |||||||||||| || ||||| || ||||| ||||| |
Sbjct 8522 CCTCCTCTCAGCCTCAGCACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAATCGGCC 8581
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || ||||| || || || ||||| || || | ||| || ||||| ||
Sbjct 8582 AGGGTACGGCCATCCTCAAGCTGCTTTCCTGCAAAGATCAACCTCTGCTGATCCGGAGGA 8641
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || ||| | ||| ||||| |||||||||
Sbjct 8642 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCAC 8700
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || || ||||| | || ||||| |||||||||||
Sbjct 8701 CTCCAAAGTAATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 8748
Score = 95.1 bits (104), Expect = 8e-15
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
||||||||||||||| |||||| || ||||| || || | ||| || || | || ||
Sbjct 8886 CACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCATCCTC 8945
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
|| || || ||||| || || | | ||| ||||| || || | |||||||||||| |
Sbjct 8946 GAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTC-CT 9004
Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|| || | || ||| | || ||||| |||||| ||||| | |||||| || |
Sbjct 9005 GAATCTTAGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACTTCGAGGGTTATGGTCT 9064
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || | || || || || ||||||||
Sbjct 9065 TGCCCGTGAGGGTCTTGACGAAGATCTGCAT 9095
>seq1108
Length=4941
Score = 123 bits (136), Expect = 2e-23
Identities = 171/237 (72%), Gaps = 2/237 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||| ||||| || |||||| || ||||| ||||| |
Sbjct 798 CCACCACGAAGACGGAGGACCAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCGGCT 857
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || || || || ||||| || || |||||||| |||||||| ||
Sbjct 858 AGGGTACGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCCGGGGGA 917
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| ||||||||| || |||||| | || ||| | || ||||| |||||||||
Sbjct 918 ATTCCCTCCTTATCCTGGATCTTA-GCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCAC 976
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGT 34715
|| | ||| || || || ||||| | ||||||||||| |||||||| | |||||
Sbjct 977 CTCGAGGGTGATGGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCATCTCTATTGT 1033
Score = 118 bits (130), Expect = 7e-22
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|| ||||||||||||||| |||||| || ||||| ||||| | ||| || || ||||
Sbjct 584 CAGCACCAAATGGAGAGTTGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCGTC 643
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
|| || || || || || || || | | ||| |||||||| || | ||||||||||||
Sbjct 644 CTCGAGCTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 703
Query 34614 TGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
|||| || | || ||| || || ||||| ||||||||| || | ||| || |
Sbjct 704 CTGGATC-TTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGG 762
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || ||||| | ||||| || || ||||||||
Sbjct 763 TCTTCCCGGTGAGGGTTTTGACGAAGATCTGCAT 796
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | || ||||| |||||| || ||||| || ||||| ||||| |
Sbjct 114 CCTCCTCTCAGCCTCAGCACCAGATGGAGGGTTGATTCCTTCTGGATGTTGTAATCGGCC 173
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | || ||||| || || || ||||| || || | ||| || ||||| ||
Sbjct 174 AAGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGAGGA 233
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| ||| || | || || | ||| ||||| |||||||||
Sbjct 234 ATGCCCTCCTTGTC-CTGAATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCCAC 292
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| ||||| || || || || | || |||||||||||||||||
Sbjct 293 CTCCAAAGTTATGGTCTTTCCTGTAAGGGTCTTCACAAAAATCTGCAT 340
>seq48530
Length=6115
Score = 122 bits (134), Expect = 5e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551
|||| ||| | ||| || || |||||| ||||| || || || | ||| |||| |
Sbjct 3526 CGCAGCACGAGATGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGCAAGAGTTCTGCCA 3585
Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611
|||||||| || || || ||||| || || | ||| || ||||| || | ||| ||||||
Sbjct 3586 TCTTCAAGCTGCTTGCCTGCAAAGATCAATCTCTGCTGATCCGGAGGGATTCCTTCCTTG 3645
Query 34612 TCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670
||| ||| ||||| ||||| | ||||||||| |||||| || |||| || ||
Sbjct 3646 TCTTGGAT-TTTTGCCTTAACATTGTCAATTGTGTCGGAGCTCTCGACCTCCAAAGTGAT 3704
Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || || |||||||||||||||||
Sbjct 3705 GGTCTTTCCAGTCAAGGTCTTCACAAAAATCTGCAT 3740
>seq21302
Length=5313
Score = 122 bits (134), Expect = 5e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| || | ||| | ||| || || |||||| ||||||||||| || | ||| ||||
Sbjct 4441 AGGCGAAGCACAAGATGAAGGGTCGACTCCTTCTGAATGTTATAGTCGGCAAGAGTTCTG 4382
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| || || |||||||| || || || ||||| || ||||| || | || ||
Sbjct 4381 CCATCTTCGAGCTGCTTACCGGCGAAGATCAATCGCTGCTGATCCGGAGGAATCCCTTCT 4322
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| |||| ||| || || ||| |||||| ||||| || || | ||
Sbjct 4321 TTGTCT-TGAATCTTTGCTTTCACATTATCAATGGTGTCTGAACTCTCAACCTCAAGAGT 4263
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| ||||| || |||||||| |||||||| || |||||
Sbjct 4262 TATGGTTTTTCCAGTTAACGTCTTCACAAAGATTTGCAT 4224
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || |||| ||| | ||| || || |||||||| ||||| ||||| |
Sbjct 4222 CCACCTCTCAGTCGCAGCACAAGATGAAGGGTCGATTCCTTTTGTATGTTGTAATCCGCC 4163
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| | |||||||| ||||| || ||||| || || | ||| || ||||| ||
Sbjct 4162 AGCGTTCTGCCATCTTCAAGCTGTTTGCCTGCAAAGATCAACCTCTGCTGATCCGGAGGG 4103
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| || ||| | ||||| | | |||||| |||||| ||
Sbjct 4102 ATCCCTTCCTTGTCTTGTAT-TTTCGCCTTAACATTGTCGACTGTGTCGGAGCTCTCAAC 4044
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || || || || || || |||||||||||||||||
Sbjct 4043 CTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTCACAAAAATCTGCAT 3996
Score = 107 bits (118), Expect = 1e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551
|||| ||| | |||||| ||| ||| ||||| || || ||||| | || || | |
Sbjct 3982 CGCAGCACAAGATGGAGGGTGGACTCTTTTTGTATATTGTAATCAGCGAGCGTCCTGCCA 3923
Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611
|||||||| || || || ||||| || || | ||| || || || || | || ||||||
Sbjct 3922 TCTTCAAGCTGCTTCCCTGCAAAGATCAATCTCTGCTGATCTGGAGGGATCCCTTCCTTG 3863
Query 34612 TCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670
||| |||||| | ||||| || ||||| ||| |||||| || |||| || ||
Sbjct 3862 TCTTGAATCTTT-GCCTTAACATTATCGATTGTATCTGAGCTCTCGACCTCCAAAGTGAT 3804
Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || || |||||||||||||||||
Sbjct 3803 GGTCTTTCCTGTCAATGTCTTCACAAAAATCTGCAT 3768
Score = 98.7 bits (108), Expect = 6e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| || | || | |||||| ||| ||||||||| || ||||| || |
Sbjct 3766 CCACCACGAAGGCGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATATTATAGTCAGCG 3707
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| || ||||| || ||||| || | | ||| ||||| || ||
Sbjct 3706 AGGGTACGGCCATCTTCGAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGG 3647
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||||| || || | |||||| || || || ||
Sbjct 3646 ATCCCTTCCTTGTCTTGGAT-TTTTGCCTTGACATTGTCAATTGTATCCGAACTTTCGAC 3588
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||||||||| || || || | || || || |||||||||||
Sbjct 3587 TTCAAGGGTTATCGTCTTGCCAGTGAGAGTCTTAACGAAAATCTGCAT 3540
>seq169900
Length=516
Score = 118 bits (130), Expect = 7e-22
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| || ||||| ||| ||||||||||| || || | ||| || ||
Sbjct 214 AGACGGAGCACCAAGTGAAGAGTTGACTCTTTTTGAATGTTGTAGTCAGCAAGAGTGCGG 273
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| |||||||| || || ||||| || || | ||| |||||||| || || | || ||
Sbjct 274 CCATCTTCAAGCTGCTTTCCGGCGAAGATCAGACGTTGTTGGTCAGGGGGGATGCCTTCT 333
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| ||| | || ||| || ||| || || ||| || ||||| | |||
Sbjct 334 TTGTCT-TGAATTTTGGCCTTCACGTTATCAATAGTATCGGAGCTTTCGACTTCGAGGGT 392
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| ||||||| ||||| || || || |||||
Sbjct 393 GATGGTTTTTCCGGTTAGGGTTTTAACGAAGATTTGCAT 431
>seq38015
Length=2403
Score = 116 bits (128), Expect = 2e-21
Identities = 146/195 (75%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 34514 TCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAA 34573
||||||| || ||||||||||| | ||| || ||| | ||||| || || || || ||||
Sbjct 1979 TCTCCTTCTGGATGTTATAATCAGCAAGAGTACGCCCATCTTCCAGCTGCTTCCCAGCAA 2038
Query 34574 ATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGT-CTGTGATCTTTTGTTTTAAC 34632
|||| | | ||| || |||||||| | ||||| |||| |||| ||| || | ||| ||
Sbjct 2039 ATATCAGCCTCTGCTGATCCGGCGGAATGCCCTCTTTGTCCTGT-ATC-TTCGCTTTCAC 2096
Query 34633 GATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTT 34691
|| || ||||| ||||||||||||| || || ||||| ||||| | ||| ||
Sbjct 2097 ATTATCGATAGTGTCCGAACTCTCCACTTCCAGAGTGATAGTTTTTCCGGTCAGCGTCTT 2156
Query 34692 CACAAAAATCTGCAT 34706
||| || ||||||||
Sbjct 2157 CACGAAGATCTGCAT 2171
>seq38014
Length=3548
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || | || ||||| |||||| || || |||||||| | |
Sbjct 755 CCACCACGAAGACGAAGGACAAGGTGCAGAGTCGACTCCTTCTGGATATTATAATCAGCA 814
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || ||| | ||||| || || || || |||||||| | | ||| || ||||||||
Sbjct 815 AGAGTACGCCCATCTTCCAGCTGCTTCCCAGCAAATATCAGCCTCTGCTGATCCGGCGGA 874
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| ||||| ||||| |||||| | ||| || || ||| ||||| ||||||||
Sbjct 875 ATGCCCTCTTTGTCCTGGATCTTC-GCTTTCACATTATCAATCGTGTCCGAACTCTCCAC 933
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || ||||| ||||| | || ||||| || ||||||||
Sbjct 934 TTCCAAAGTGATGGTTTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 981
Score = 82.4 bits (90), Expect = 5e-11
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG-- 34537
||||| | || | || ||||||||| | || ||||||||||||||| || || |
Sbjct 983 CCGCCGCGCAGCCTCAGCACCAAATGCAATGTCGACTCCTTTTGAATGTTGTAGTCCGCC 1042
Query 34538 AAAGT-GTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596
||||| ||| | ||||| || || || || ||||| || | | ||| || || ||
Sbjct 1043 AAAGTCCTTC---CATCTTCCAGCTGCTTGCCTGCAAAAATCAGCCTCTGCTGATCGGGA 1099
Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTC 34655
|| | ||| ||||| || |||| || | || ||| | || ||||| ||||||
Sbjct 1100 GGGATTCCTTCCTTATCCTGGATC-TTCGCCTTCACGTTGTCGATCGTGTCGGAGCTCTC 1158
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||||| || ||||| || || |||| ||||| || || || |||||
Sbjct 1159 GACTTCCAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATTTGCAT 1209
>seq76882
Length=309
Score = 114 bits (126), Expect = 8e-21
Identities = 141/190 (74%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 34518 CTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATAT 34577
||| |||||||| || || | ||| || ||| | ||||| || ||||| |||||||||||
Sbjct 309 CTTCTGAATGTTGTAGTCAGCAAGAGTGCGCCCATCTTCGAGCTGTTTTCCGGCAAATAT 250
Query 34578 TAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-A 34636
| ||||| ||||| || || | || || |||||| ||| ||||| || ||| |
Sbjct 249 AAGGCGCTGCTGGTCAGGAGGGATGCCTTCTTTGTCT-TGAATTTTTGCCTTGACGTTGT 191
Query 34637 AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAA 34696
||| ||||| ||| || ||||| | ||| || ||||| ||||| | ||||| ||||
Sbjct 190 CAATAGTGTCAGAGCTTTCGACTTCGAGGGTGATTGTTTTCCCGGTGAGGGTTTTGACAA 131
Query 34697 AAATCTGCAT 34706
| ||||||||
Sbjct 130 AGATCTGCAT 121
>seq63669
Length=360
Score = 113 bits (124), Expect = 3e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| || || || ||| ||||||||||| || || | ||| || ||
Sbjct 321 AGACGGAGCACCAAGTGAAGGGTTGACTCTTTTTGAATGTTGTAGTCAGCAAGAGTACGG 262
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||||||||| || || |||||||| || | ||| || || || || || | ||| |||
Sbjct 261 CCGTCTTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCTGGGGGGATTCCTTCC 202
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| ||| ||| ||||| || || | ||| || || || || ||||| | |||
Sbjct 201 TTATCT-TGAATTTTTGCCTTTACATTGTCAATAGTATCCGAACTTTCAACTTCGAGGGT 143
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| || |||| |||||||| || ||||||||
Sbjct 142 GATGGTTTTTCCAGTTAGGGTTTTCACGAAGATCTGCAT 104
>seq1864
Length=9564
Score = 113 bits (124), Expect = 3e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| || | ||| | ||| || || |||||| ||||||||||| || | ||| ||||
Sbjct 3159 AGGCGAAGCACAAGATGAAGGGTCGACTCCTTCTGAATGTTATAGTCGGCAAGAGTTCTG 3218
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| || || ||||| || || || || ||||| || || || || | || ||
Sbjct 3219 CCATCTTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGATCTGGAGGAATCCCTTCT 3278
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| |||| ||||| || ||| |||||| ||||| || |||| ||
Sbjct 3279 TTGTCT-TGAATCTTTGCCTTAACATTATCAATGGTGTCTGAACTCTCAACCTCCAGAGT 3337
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| ||||| || ||||| || || ||||| ||||||||
Sbjct 3338 TATGGTTTTCCCAGTTAATGTCTTGACAAAGATCTGCAT 3376
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | |||| ||| | |||||| || |||||||||||| || || || |
Sbjct 3378 CCACCTCTCAATCGCAGCACGAGATGGAGGGTCGACTCCTTTTGAATATTGTAGTCCGCC 3437
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||||| | || ||||| ||||| || ||||| || || | || || ||||| ||
Sbjct 3438 AGTGTTCTGCCATCCTCAAGCTGTTTGCCTGCAAAGATCAATCTTTGCTGATCCGGAGGG 3497
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| |||| || || || || |||||| ||||| ||
Sbjct 3498 ATACCTTCCTTGTCT-TGAATCTTTGCCTTCACATTATCGATGGTGTCTGAACTCTCAAC 3556
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || || || || || || |||||||| ||||||||
Sbjct 3557 CTCCAAAGTGATGGTCTTTCCAGTCAAGGTCTTCACAAATATCTGCAT 3604
Score = 98.7 bits (108), Expect = 6e-16
Identities = 155/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551
|||| || | |||||| ||| || || || || || ||||||| |||||||| |
Sbjct 5203 CGCAGCATGAGATGGAGGGTGGATTCTTTCTGGATATTGTAATCTGCAAGTGTTCTACCA 5262
Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611
||||| ||||| || || |||||||| || | ||| || ||||| | | || ||||||
Sbjct 5263 TCTTCGAGTTGCTTCCCAGCAAATATCAATCTCTGCTGATCCGGAAGGATCCCTTCCTTG 5322
Query 34612 TC-TGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTA 34669
|| ||| ||||| | || || | ||| ||||| ||| | ||||||| || |
Sbjct 5323 TCCTGT-ATCTTG-GCCTTCACATTGTCAATGGTGTCGGAGCTTTTGACTTCCAAAGTGA 5380
Query 34670 TCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || || || || || |||||||||||||||||
Sbjct 5381 TGGTCTTTCCTGTCAAGGTCTTCACAAAAATCTGCAT 5417
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | |||| ||| | ||| || || || ||||| || || ||||| |
Sbjct 3606 CCACCTCTCAAGCGCAGCACGAGATGAAGGGTAGATTCTTTTTGGATATTGTAATCAGCC 3665
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | | |||||||| || || || ||||| || || | ||| || ||||| ||
Sbjct 3666 AGTGTCCTGCCATCTTCAAGCTGCTTGCCTGCAAAGATCAATCTCTGCTGATCCGGAGGG 3725
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| |||||| | || || || || |||| | ||||| ||
Sbjct 3726 ATACCTTCCTTGTCTTGAATCTTT-GCCTTCACATTATCGATGGTGTTTGAACTCTCAAC 3784
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || || || || || || |||||||||||||||||
Sbjct 3785 CTCCAAAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAAATCTGCAT 3832
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551
|||| ||| | ||||||||| ||| || || || || ||||| | ||||| | |
Sbjct 3846 CGCAGCACAAGATGGAGAGTCGACTCTTTCTGGATATTGTAATCAGCCAGTGTCCTGCCA 3905
Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611
||||| || || || || ||||| || || | || ||||| || || | || ||||||
Sbjct 3906 TCTTCGAGCTGCTTGCCAGCAAAAATCAATCTTTGCTGGTCTGGAGGGATCCCTTCCTTG 3965
Query 34612 TC-TGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTA 34669
|| ||| ||||| | ||| || | || |||||| ||| || ||||||| ||||
Sbjct 3966 TCCTGT-ATCTTG-GCTTTCACATTGTCGATGGTGTCTGAGCTTTCTACTTCCAAAGTTA 4023
Query 34670 TCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || || || || || ||||| |||||||||||
Sbjct 4024 TGGTCTTTCCAGTCAAGGTCTTCACGAAAATCTGCAT 4060
>seq156471
Length=3476
Score = 111 bits (122), Expect = 1e-19
Identities = 158/217 (73%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551
|||| ||| | |||||| ||| ||| || || || || ||||||| |||||||| |
Sbjct 1886 CGCAGCACAAGATGGAGGGTGGACTCTTTCTGGATATTGTAATCTGCAAGTGTTCTACCA 1827
Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611
||||| ||||| || || ||||| || || | || ||||| || || | || ||||||
Sbjct 1826 TCTTCGAGTTGCTTTCCAGCAAAAATCAATCTTTGCTGGTCTGGAGGGATCCCTTCCTTG 1767
Query 34612 TC-TGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTA 34669
|| ||| ||||| | || ||| | || |||||| ||| || ||||||| ||| |
Sbjct 1766 TCCTGT-ATCTTG-GCCTTCACGTTGTCTATGGTGTCTGAGCTTTCGACTTCCAAGGTGA 1709
Query 34670 TCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || |||| || || || |||||||||||
Sbjct 1708 TCGTCTTTCCAGTTAGGGTCTTAACGAAAATCTGCAT 1672
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | |||| ||| | ||| || || || ||||| ||||| ||||| |
Sbjct 2126 CCACCTCTCAATCGCAGCACAAGATGAAGGGTCGATTCTTTTTGTATGTTGTAATCCGCC 2067
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||||| | || || |||||||| || ||||| || || | || || ||||| ||
Sbjct 2066 AGTGTTCTGCCATCCTCGAGTTGTTTGCCTGCAAAAATCAATCTTTGCTGATCCGGAGGG 2007
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||||| || || | | |||||| |||||| ||
Sbjct 2006 ATACCTTCCTTGTCTTGGAT-TTTTGCCTTCACATTGTCGACTGTGTCGGAGCTCTCAAC 1948
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || || || || || || |||||||||||||||||
Sbjct 1947 CTCCAAAGTGATGGTCTTCCCCGTCAAGGTCTTCACAAAAATCTGCAT 1900
>seq55212
Length=5247
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| |||| ||| || || ||||| || || || ||||| |
Sbjct 2983 CCACCTCTCAACCTCAAAACCAGATGTAGGGTCGATTCCTTCTGGATATTGTAATCAGCT 2924
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| |||| || ||||| || || ||||| || |||||||| ||||| || ||
Sbjct 2923 AGGGTTCGACCGTCCTCGAGTTGCTTCCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 2864
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| || |||||||| ||||| | || || | || || || |||||| ||
Sbjct 2863 ATGCCTTCCTTGTCCTGAATCTTG-GCCTTGACATTGTCGATGGTATCCGAGCTCTCAAC 2805
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || ||||| ||||| | ||||||||||||||| |||||
Sbjct 2804 TTCAAGGGTGATGGTTTTTCCGGTGAGCGTTTTCACAAAAATTTGCAT 2757
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| |||| ||| ||||| |||||| ||||| || ||||| |
Sbjct 3464 CCACCTCTCAACCTCAAAACCAGATGAAGAGTCGACTCCTTCTGAATATTGTAATCAGCT 3405
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | | | ||||| || || || || ||||| || || |||||||||||||| ||
Sbjct 3404 AGCGTCCTCCCATCTTCTAGCTGCTTCCCAGCAAAGATCAAGCGCTGTTGGTCCGGAGGA 3345
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||| || ||| |||| || || | ||| |||||| || || ||
Sbjct 3344 ATTCCTTCCTTATC-CTGAATCTTTGCCTTGACATTGTCAATCGTGTCTGAACTTTCAAC 3286
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || || || || || | || ||||| |||||||||||
Sbjct 3285 TTCGAGTGTAATGGTCTTTCCAGTAAGAGTCTTCACGAAAATCTGCAT 3238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313997444138108
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |