Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mentha_20longifolia_20[genbank_20GCA_5F001642375.1_202016-05-11] 190,876 sequences; 353,287,234 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq26240 82.4 5e-11 seq21302 82.4 5e-11 >seq26240 Length=11166 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || |||||||||||||| || || || || || | || || || ||| || Sbjct 9323 ATGCAGATCTTTGTGAAAACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAGAGCTCC 9264 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || |||| ||||| || || ||||| ||||| |||| ||| | Sbjct 9263 GACACCATCGACAAC--GTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCCCCGGACC 9206 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| |||| || || ||||| ||||| | || |||| |||| | | |||| |||| Sbjct 9205 AGCAGAGGTTGATCTTCGCCGGCAAACAGCTCGAGGACGGCCGCACCCTTGCCGACTACA 9146 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 ||||||| || ||| |||| | || ||||| Sbjct 9145 ACATCCAGAAGGAGTCCACTCTCCACTTGGT 9115 >seq21302 Length=5313 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| |||||||| ||||||||||| || ||||| | || ||||| || || Sbjct 3312 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATTACCCTCGAGGTCGAGAGTTCC 3371 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | || || ||||| |||||| || || ||||| || || | || || | Sbjct 3372 GACACTATTGACAAT--GTCAAAGCTAAGATTCAAGACAAGGAGGGAATCCCTCCAGATC 3429 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || |||| || || ||||||||| | || || | ||| | | || ||||||| Sbjct 3430 AGCAGAGGCTAATCTTCGCTGGAAAACAACTTGAAGATGGACGTACCCTGGTGGATTACA 3489 Query 27968 ACATCCAAAAAGA 27980 | ||||| ||||| Sbjct 3490 ATATCCAGAAAGA 3502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355034556854052