Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001 662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq161 91.5 2e-13 >seq161 Length=5110746 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296 || || |||| ||| ||||||||||| |||||||| |||||||| ||||| ||||| || Sbjct 1384128 TAGGTCTCGAGGAGGAGGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAG 1384069 Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTT 17356 ||||| ||| ||||| || | | || || ||| ||| || | || || || Sbjct 1384068 CCGTAGAAGGCGCGGGCCTCGGAGAGCTGGACCTCCTTCATGAAGCGGACGGCGAGGTTC 1384009 Query 17357 TCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||| |||||||||||| |||||||| || || Sbjct 1384008 TCGAGGACGATGCCGTCGGAGGCGGCGAAGAAGGC 1383974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517310272015680