Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq569 127 2e-24
seq116 127 2e-24
seq87 125 8e-24
seq49 122 1e-22
seq22 109 6e-19
seq203 107 2e-18
seq652 102 9e-17
seq31095 84.2 2e-11
seq4891 84.2 2e-11
seq88 84.2 2e-11
seq23 84.2 2e-11
>seq569
Length=4400913
Score = 127 bits (140), Expect = 2e-24
Identities = 152/203 (75%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || || || || || |||| || |||||||| || |||||
Sbjct 2057987 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2058046
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||||| || | || |||||||||| ||| || |||| |||
Sbjct 2058047 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2058105
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || ||||| |||| |||||||| || |||||||| || || |
Sbjct 2058106 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 2058165
Query 43171 CAAAGATTTGCATTTTTACGCCG 43193
| ||||| ||||| || |||||
Sbjct 2058166 CGAAGATCTGCATCTT--CGCCG 2058186
Score = 109 bits (120), Expect = 6e-19
Identities = 145/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || || || || || |||| || |||||||| || |||||
Sbjct 2054736 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2054795
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | || ||| || ||| ||| || |||| |||
Sbjct 2054796 GATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCTTTATCCTGGATCTTGGCCTTGA-CGT 2054854
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || ||||| || | |||||||| || |||||||| || || |
Sbjct 2054855 TGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 2054914
Query 43171 CAAAGATTTGCATTTTTAC 43189
| ||||| ||||| || ||
Sbjct 2054915 CGAAGATCTGCATCTTCAC 2054933
>seq116
Length=10441785
Score = 127 bits (140), Expect = 2e-24
Identities = 148/196 (76%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || ||||||||||| || || |||| |||| || |||||||| ||||||||
Sbjct 4726480 CTCCTTCTGGATATTGTAATCGGCGAGGGTCCTACCGTCCTCGAGCTGCTTTCCAGCGAA 4726421
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || |||||||| || | ||| | || |||||||||| |||||| |||| |||
Sbjct 4726420 GATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTGA-CGT 4726362
Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | |||||| |||| || || |||| ||||||||| || || || || ||||
Sbjct 4726361 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGCGTGATGGTCTTCCCGGTCAGGGTCT 4726305
Query 43168 TTACAAAGATTTGCAT 43183
| || ||||| |||||
Sbjct 4726304 TGACGAAGATCTGCAT 4726289
Score = 118 bits (130), Expect = 1e-21
Identities = 144/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || |||||||| || || |||| |||| || |||||||| || |||||
Sbjct 4711879 CTCCTTCTGGATGTTGTAATCGGCGAGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 4711938
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || |||||||| || | ||| | || |||||||||| ||| || |||| |
Sbjct 4711939 GATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 4711998
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | |||||| |||| || || |||| ||||||||||||||| || || |||||
Sbjct 4711999 ATCGATCGTGTCCGAGCTC---TCGACCTCGAGCGTGATGGTTTTGCCGGTCAGGGTCTT 4712055
Query 43169 TACAAAGATTTGCAT 43183
|| ||||| |||||
Sbjct 4712056 GACGAAGATCTGCAT 4712070
Score = 100 bits (110), Expect = 3e-16
Identities = 140/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || ||||||||||| || || || || |||| || |||||||| || |||||
Sbjct 4711651 CTCCTTCTGGATATTGTAATCGGCGAGGGTGCGACCGTCCTCCAGCTGCTTCCCGGCGAA 4711710
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| |||||||| || | ||| | | |||||||||| || || || | |
Sbjct 4711711 GATGAGCCGCTGCTGATCCGGCGGGATCCCCTCCTTGTCCTGTATCTTCGCCTTCACATT 4711770
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | |||||| |||| ||||| || | |||||| || || || || || |||||
Sbjct 4711771 GTCGATCGTGTCCGAGCTC---TCCACCTCCAGCGTGATCGTCTTCCCGGTCAGGGTCTT 4711827
Query 43169 TACAAAGATTTGCAT 43183
|| ||||| |||||
Sbjct 4711828 CACGAAGATCTGCAT 4711842
Score = 100 bits (110), Expect = 3e-16
Identities = 144/199 (72%), Gaps = 8/199 (4%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || || || || || |||| || |||||||| || |||||
Sbjct 4726252 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTCCCGGCGAA 4726193
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | || ||||||||| || || |||| |||
Sbjct 4726192 GATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGTATCTTGGCCTTGA-CGT 4726134
Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | ||||| |||| || || |||| ||||| ||| ||||| || || ||||
Sbjct 4726133 TGTCGATGGTGTCGGAGCTC---TCGACCTCGAGCGTGACGGTCTTGCCGGTCAGGGTCT 4726077
Query 43168 TTACAAAGATTTGCATTTT 43186
| || ||||| ||||| ||
Sbjct 4726076 TGACGAAGATCTGCATCTT 4726058
>seq87
Length=12262769
Score = 125 bits (138), Expect = 8e-24
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || || || ||||| |||| || |||||||| || |||||
Sbjct 7257239 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 7257298
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | || |||||||||| ||| || || | |
Sbjct 7257299 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 7257358
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | ||||||||||| || || |||| || ||||| || |||||||| || || ||
Sbjct 7257359 GTCGATGGTGTCGCTCGACTCGACCTCGAGGGTTATGGTCTTCCCCGTTAGGGTTTTCAC 7257418
Query 43172 AAAGATTTGCATTTTTACGCCGAATAC 43198
||||| ||||| ||| | |||| ||
Sbjct 7257419 GAAGATCTGCATCTTTCCTTCGAAGAC 7257445
>seq49
Length=4798478
Score = 122 bits (134), Expect = 1e-22
Identities = 168/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||| | ||| | ||||||||| | ||| |||||||| || ||||||||||||
Sbjct 2846206 CCACCTCTCAGACGAAGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCC 2846147
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || ||| | || || |||||||| ||||| || ||||| | ||||||||| | ||
Sbjct 2846146 AGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 2846087
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132
| | ||| |||| | ||| | || | |||| | | | |||||| ||| |||
Sbjct 2846086 ATTCCCTCTTTGT-CTTGAATCTTGGCCTTGACATTATCAATCGTGTCCGAGCT---TTC 2846031
Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| |||| || ||||| ||||| || || ||||| |||||||| |||||
Sbjct 2846030 AACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2845980
Score = 116 bits (128), Expect = 4e-21
Identities = 145/195 (74%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|||||||| || |||||||||||||| || ||| | || || |||||||| ||||| ||
Sbjct 2840364 TCCTTTTGGATGTTGTAATCAGCCAGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAG 2840305
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
||||| | ||||||||| | || | | |||||||| | ||| | || | |||| |
Sbjct 2840304 ATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCCTTGT-CTTGAATCTTGGCCTTGACATT 2840246
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| |||||||| ||| ||| || |||| || ||||| ||||| || || |||||
Sbjct 2840245 ATCAACCGTGTCCGAGCT---TTCAACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTT 2840189
Query 43169 TACAAAGATTTGCAT 43183
|||||||| |||||
Sbjct 2840188 CACAAAGATCTGCAT 2840174
Score = 107 bits (118), Expect = 2e-18
Identities = 143/195 (73%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || || |||||||||||||| || ||| | || || |||||||| ||||| ||
Sbjct 2869648 TCCTTCTGGATGTTGTAATCAGCCAGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAG 2869589
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
||||| | ||||||||| | || | | |||||||| | ||| | || | |||| |
Sbjct 2869588 ATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCCTTGT-CTTGAATCTTGGCCTTGACATT 2869530
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| |||||||| ||| ||| || || | || ||||| ||||| || || |||||
Sbjct 2869529 ATCAACCGTGTCCGAGCT---TTCAACCTCAAGGGTAATGGTCTTGCCGGTGAGGGTCTT 2869473
Query 43169 TACAAAGATTTGCAT 43183
|||||||| |||||
Sbjct 2869472 CACAAAGATCTGCAT 2869458
Score = 105 bits (116), Expect = 8e-18
Identities = 165/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || | ||||| ||||| || | || ||| || || || || ||||| |||
Sbjct 2870140 CCTCCCCTCAGACGCAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTATAATCTGCC 2870081
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||||| | || |||||||| || ||||| || || || | |||||| || | ||
Sbjct 2870080 AGAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2870021
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132
| || || |||||| ||| |||||| ||||| | | | ||||| |||| ||
Sbjct 2870020 ATGCCTTCTTTGTCC-TGAATTTTTGCTTTGACATTGTCGATAGTGTCAGAGCTC---TC 2869965
Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| || | ||||| ||||| || || || ||||| |||||||||||||||
Sbjct 2869964 AACTTCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTGACAAAGATTTGCATT 2869913
Score = 104 bits (114), Expect = 3e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||| | ||| | ||||||||| | ||| ||||| || || || |||||||||
Sbjct 2840628 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTATAATCAGCC 2840569
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || |||||||| || || || ||||| | ||||||||| | ||
Sbjct 2840568 AGGGTGCGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 2840509
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132
| | |||||| | | ||| | || | |||| | | | |||||| ||| |||
Sbjct 2840508 ATTCCCTCCTTAT-CTTGAATCTTGGCCTTGACATTATCAATCGTGTCAGAGCT---TTC 2840453
Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| |||| || ||||| ||||| || || ||||| |||||||| |||||
Sbjct 2840452 AACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2840402
Score = 100 bits (110), Expect = 3e-16
Identities = 140/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||||||||||||||| ||||| ||||| | || || ||||| || || || ||
Sbjct 2841277 CTCCTTTTGAATATTGTAATCGGCCAGTGTCCGGCCATCCTCGAGCTGTTTCCCTGCAAA 2841218
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | ||||||||||| | || | || ||||||||| || || ||||| |
Sbjct 2841217 AATCAACCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGTATCTTCGCTTTGACATT 2841158
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | |||||| |||| || || || | ||||| || ||||| || || |||||
Sbjct 2841157 ATCAATCGTGTCCGAGCTC---TCGACTTCCAAAGTGATAGTCTTGCCAGTCAGAGTCTT 2841101
Query 43169 TACAAAGATTTGCAT 43183
||||| || |||||
Sbjct 2841100 CACAAAAATCTGCAT 2841086
Score = 96.9 bits (106), Expect = 4e-15
Identities = 139/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||| ||||| || ||||| ||||| | || || || ||||| || |||||
Sbjct 2870333 CTCCTTTTGAATGTTGTAGTCGGCCAGTGTCCGGCCATCCTCAAGTTGCTTCCCTGCGAA 2870274
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||| | ||||||||||| | || | || ||||| ||| || || |||| |
Sbjct 2870273 TATCAACCGCTGCTGGTCCGGGGGAATGCCTTCCTTATCCTGTATCTTCGACTTGACATT 2870214
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | |||||| |||| ||||| || | ||||| || ||||| || || |||||
Sbjct 2870213 ATCGATCGTGTCAGAGCTC---TCCACTTCCAAGGTGATAGTCTTGCCGGTAAGGGTCTT 2870157
Query 43169 TACAAAGATTTGCAT 43183
||||| || |||||
Sbjct 2870156 CACAAAAATCTGCAT 2870142
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||| | ||| | ||||||||| | ||| |||| || || || |||||||||
Sbjct 2846617 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGATCCCTTCTGGATGTTATAATCAGCC 2846558
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || |||||||| | || || ||||| | ||||||||| | ||
Sbjct 2846557 AGGGTGCGACCATCCTCGAGCTGCTTGCTTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 2846498
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | |||||| | | ||| | || | || | | | | ||||||| ||| ||
Sbjct 2846497 ATTCCCTCCTTAT-CTTGAATCTTGGCCTTAACATTATCGATCGTGTCGGAGCTTTCAAC 2846439
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| || ||||| ||||| || || ||||| |||||||| |||||
Sbjct 2846438 CTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2846391
Score = 91.5 bits (100), Expect = 2e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||| |||||||| ||||| ||||| | || | || ||||| || || ||
Sbjct 2847265 CTCCTTTTGAATGTTGTAATCGGCCAGTGTCCGGCCATCCCCGAGTTGCTTCCCTGCAAA 2847206
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | ||||||||||| | || | || |||||||||| || || ||||| |
Sbjct 2847205 AATCAACCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGTATCTTCGCTTTGACATT 2847146
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | |||||| |||| || || || | ||||| || ||||| || || |||||
Sbjct 2847145 ATCAATCGTGTCCGAGCTC---TCAACTTCCAAGGTGATAGTCTTGCCAGTCAGAGTCTT 2847089
Query 43169 TACAAAGATTTGCAT 43183
||||| | |||||
Sbjct 2847088 CACAAAAACCTGCAT 2847074
>seq22
Length=3960921
Score = 109 bits (120), Expect = 6e-19
Identities = 144/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || || || || || |||| || |||||||| ||||||||
Sbjct 262918 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAA 262977
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||||||||| | || | | |||||||||| ||| || |||| |||
Sbjct 262978 GATGAGACGCTGCTGGTCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 263036
Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | |||||| |||| || || |||| |||||||| ||||| || | ||||
Sbjct 263037 TGTCAATCGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCT 263093
Query 43168 TTACAAAGATTTGCAT 43183
| || ||||| |||||
Sbjct 263094 TGACGAAGATCTGCAT 263109
Score = 104 bits (114), Expect = 3e-17
Identities = 143/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || || || || ||| |||| || |||||||| || |||||
Sbjct 263374 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTTCGCCCGTCCTCCAGCTGCTTCCCGGCGAA 263433
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | | |||||||||| ||| || |||| |||
Sbjct 263434 GATCAGACGCTGCTGGTCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 263492
Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | ||||| |||| ||||| |||| |||||||| || || || || ||||
Sbjct 263493 TGTCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCT 263549
Query 43168 TTACAAAGATTTGCAT 43183
| || ||||| |||||
Sbjct 263550 TGACGAAGATCTGCAT 263565
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || || || || || || || || |||| || |||||||| || |||||
Sbjct 263146 CTCCTTCTGGATGTTATAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 263205
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | || | | |||||||||| ||| || || | |||
Sbjct 263206 GATCAGACGCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 263264
Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167
| | | ||||| |||| ||||| |||| |||||||| ||||| || || ||||
Sbjct 263265 TGTCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCT 263321
Query 43168 TTACAAAGATTTGCAT 43183
| || ||||| |||||
Sbjct 263322 TGACGAAGATCTGCAT 263337
>seq203
Length=8626763
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||| || | ||| | |||||| || | || |||||| ||||| || ||||| |||
Sbjct 5730156 CCTCCCCTGAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCC 5730097
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| || || | || || |||||||| ||||| || || || | ||||||||| | ||
Sbjct 5730096 AAGGTTCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 5730037
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | |||||||| ||| |||||| ||| | | | | |||||| ||||||
Sbjct 5730036 ATCCCTTCCTTGTCT-TGAATTTTTGCTTTTACATTATCGATTGTGTCGGAGCTTTCCAC 5729978
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||||| || |||||||| || || || ||||||||||||||
Sbjct 5729977 CTCAAGGGTGATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTGCAT 5729930
Score = 107 bits (118), Expect = 2e-18
Identities = 142/196 (72%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| ||||| ||||| || |||| | | || || ||||||||||| |||||
Sbjct 5731033 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTCCCATCCTCCAGCTGCTTACCGGCGAA 5730974
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| |||| ||| ||||| | || | | ||||||||| ||| ||| || | |
Sbjct 5730973 GATCAGTCTCTGTTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTTTGCCTTAACATT 5730914
Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168
| | |||||| |||| || || || | ||||||||||| ||||| || |||||
Sbjct 5730913 ATCAATCGTGTCCGAGCTC---TCGACCTCCAAGGTGATGGTTTTTCCCGTCAGGGTCTT 5730857
Query 43169 TACAAAGATTTGCATT 43184
||||| || ||||||
Sbjct 5730856 GACAAAAATCTGCATT 5730841
Score = 84.2 bits (92), Expect = 2e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC 60131
|| ||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 2927410 GCCGGGGATCGAACCCGGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAC 2927468
>seq652
Length=2384379
Score = 102 bits (112), Expect = 9e-17
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||| || | ||| | |||||| || | ||| ||||||||||| ||||| || ||
Sbjct 465057 TCCTCCCCTCAGACGGAGCACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCTGC 464998
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| |||| | || || || ||||| ||||| || || | | ||||||||| | ||
Sbjct 464997 GAGCGTCCTGCCATCCTCGAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGG 464938
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA---TTC 43132
| | |||||||||| |||||| || | | | | ||||| ||| |||
Sbjct 464937 GATTCCCTCCTTGTCCTGGATTTTCGCCTTCACGTTATCGATAGTGTC---CGAACTTTC 464881
Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| |||| || ||||| ||||| || || ||||| ||||||||||||||
Sbjct 464880 GACCTCGAGGGTTATGGTCTTGCCAGTGAGGGTCTTCACAAAGATTTGCAT 464830
Score = 93.3 bits (102), Expect = 5e-14
Identities = 162/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || || |||| |||||| || | ||| |||||| || || || ||||| |||
Sbjct 465284 CCCCCCCTCAATCGCAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAATCCGCC 465225
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| ||||| | || || || || || || || || || || | ||||| || | ||
Sbjct 465224 AAAGTCCTACCATCCTCAAGTTGTTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGA 465165
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132
| || ||||||||| ||| |||| | ||||| | | | ||||| |||| ||
Sbjct 465164 ATGCCTTCCTTGTCC-TGAATTTTCGCTTTGACATTGTCAATGGTGTCAGAGCTC---TC 465109
Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| || | ||||| || || || ||||| ||||| |||||||||||||||
Sbjct 465108 AACTTCCAAGGTGATCGTCTTCCCAGTTAGGGTCTTGACAAAGATTTGCATT 465057
>seq31095
Length=6821297
Score = 84.2 bits (92), Expect = 2e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC 60131
|| ||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 2909555 GCCGGGGATCGAACCCGGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAC 2909497
>seq4891
Length=3437377
Score = 84.2 bits (92), Expect = 2e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC 60131
|| ||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 526266 GCCGGGGATCGAACCCGGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAC 526324
>seq88
Length=6199832
Score = 84.2 bits (92), Expect = 2e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||| || ||||| || || || ||||| | | || |||||||| || |||||
Sbjct 5458663 CTCCTTTTGGATGTTGTAGTCGGCAAGGGTCCGGCTGCCCTCCAGCTGCTTGCCGGCGAA 5458722
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
||||| ||||||||||| | ||| | || |||||||||
Sbjct 5458723 GATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 5458761
>seq23
Length=5704166
Score = 84.2 bits (92), Expect = 2e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 60073 GCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC 60131
|| ||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 13735 GCCGGGGATCGAACCCGGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAC 13677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571557594537280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |