Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001 662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 4e-11 >seq12 Length=4956709 Score = 84.2 bits (92), Expect = 4e-11 Identities = 100/134 (75%), Gaps = 4/134 (3%) Strand=Plus/Plus Query 94902 TGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATC 94961 |||||| ||| ||||| |||||||||||||| || || | || ||||| | || Sbjct 4012318 TGTTCCTGCATTGAACAGGGTGGGGGAAGCATGAGTGAACCATCGCTGAGACATCATATG 4012377 Query 94962 ATATGTTTCAATGACAGATTTGATGTCTGATCC--GTGAATGCCGACAGCCACACGCATA 95019 |||||||| ||| |||| | |||||| |||| |||||| || ||||| || | ||| Sbjct 4012378 ATATGTTTTGATGGCAGAGTCGATGTC--ATCCTTGTGAATTCCAACAGCAACCCTCATC 4012435 Query 95020 ATCATGTCCTGAGG 95033 | ||||| |||||| Sbjct 4012436 AACATGTGCTGAGG 4012449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989122787059080