Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq31095 104 2e-17
>seq31095
Length=6821297
Score = 104 bits (114), Expect = 2e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA 5643
|||| |||||||||||| || | ||||||| |||| || ||||| ||| ||| | ||
Sbjct 3050997 CTCGATGATCAGCTGCGCGATCCTGTCGCCCATCTTCACTTCGAAGTCGATGTCGGAGAG 3050938
Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703
||||||||| | ||| || || ||| | |||||| || || ||||||||||| || ||
Sbjct 3050937 GTTGAACAGGATCACCCCAACCGGGCCTCTGTAGTCCGCATCGATCACGCCCGCCCCGAC 3050878
Query 5704 GTCGATGAAGTGCTT 5718
|||||| | |||||
Sbjct 3050877 GTCGATCGAATGCTT 3050863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429863742907712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |