Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001 662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq31095 104 2e-17 >seq31095 Length=6821297 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA 5643 |||| |||||||||||| || | ||||||| |||| || ||||| ||| ||| | || Sbjct 3050997 CTCGATGATCAGCTGCGCGATCCTGTCGCCCATCTTCACTTCGAAGTCGATGTCGGAGAG 3050938 Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703 ||||||||| | ||| || || ||| | |||||| || || ||||||||||| || || Sbjct 3050937 GTTGAACAGGATCACCCCAACCGGGCCTCTGTAGTCCGCATCGATCACGCCCGCCCCGAC 3050878 Query 5704 GTCGATGAAGTGCTT 5718 |||||| | ||||| Sbjct 3050877 GTCGATCGAATGCTT 3050863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429863742907712