Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_006884.2
Length=178249
Score E
Sequences producing significant alignments: (Bits) Value
seq444 547 8e-151
seq10427 396 3e-105
seq32303 288 1e-72
seq31551 250 3e-61
seq31730 168 8e-37
seq31523 161 1e-34
seq34854 147 2e-30
seq77 125 8e-24
seq155 123 3e-23
seq231 122 1e-22
seq85 116 4e-21
seq134 107 2e-18
seq151 100 3e-16
seq31544 86.0 7e-12
>seq444
Length=4271
Score = 547 bits (606), Expect = 8e-151
Identities = 725/1001 (72%), Gaps = 4/1001 (0%)
Strand=Plus/Minus
Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 170725
|| ||| | ||| |||| |||||| || || | ||| |||| ||||||||||| ||
Sbjct 1114 TTCTGTAACTGGATAACTAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1055
Query 170726 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 170784
|||||||| | ||| | || || || || ||| ||| | |||||||| ||||||||
Sbjct 1054 ATGATCCC-TACCTTATTGACCGCAACTTCTGTTTTTATTATCGCATTCATTGCTGCTCC 996
Query 170785 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAACA 170843
|||||| ||||| || || || | ||||| ||| | || ||| ||||| || || ||||
Sbjct 995 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTT-TACGGAAACA 937
Query 170844 ACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCA 170903
| || || || ||||| | |||| |||| || || ||||| || || || || |
Sbjct 936 ATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGATTGCATTTTTACCCAA 877
Query 170904 TCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTA 170963
|||||||||| || | | || || ||| | |||||||| |||||||| | || ||
Sbjct 876 TCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGCGGTCCTTATGAACTAATTG 817
Query 170964 TTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACA 171023
|| | ||||| | |||| | || || |||||| | |||||||||| | |
Sbjct 816 TTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 757
Query 171024 GACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTG 171083
| || || ||| | |||||||| ||| ||||| ||||| ||||| | || || ||
Sbjct 756 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 697
Query 171084 CAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTA 171143
| || ||| | | |||||| | |||||||| || |||||||||||||| ||||| |
Sbjct 696 CTGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 637
Query 171144 TCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACC 171203
|||| ||||| |||||||| ||| | || ||||| || || |||||||| || |||||||
Sbjct 636 TCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACC 577
Query 171204 CCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACG 171263
| || || ||| ||||||||| ||| | ||||| || || || ||||| ||||| |
Sbjct 576 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATG 517
Query 171264 GTTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACG 171323
|||| | || || ||| | | ||||| || || || || || || | || | |
Sbjct 516 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 457
Query 171324 GCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCG 171383
| || | ||||| |||||||||||||| || |||||||| |||||||| || || || |
Sbjct 456 GTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTG 397
Query 171384 GTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCG 171443
| |||| || ||||| ||||| |||||||| |||||||| ||||| |||||| | |
Sbjct 396 GCCGATTGATTTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 337
Query 171444 CTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCA 171503
| | | || ||||| || | ||||| || || | ||||| |||| ||||| ||||
Sbjct 336 CGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 277
Query 171504 ACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAA 171563
|||| || || ||||| |||||||||||||| || ||| | ||| || | |
Sbjct 276 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATA 217
Query 171564 CATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATG 171623
| |||| ||| || ||||| | || |||||||| |||||||||||||||||| | ||||
Sbjct 216 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 157
Query 171624 CACACAACTTCCCACTAGACCTAGCATCTGCTGAGTCTACA 171664
| ||||||||||| ||||||||||| ||| |||| || ||
Sbjct 156 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 116
>seq10427
Length=4047
Score = 396 bits (438), Expect = 3e-105
Identities = 717/1049 (68%), Gaps = 21/1049 (2%)
Strand=Plus/Plus
Query 171784 AAAGAGAATGGTTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCG 171843
||| ||| | ||||| || | ||||| |||||| ||| || || ||||| || | |
Sbjct 765 AAAAAGATTTATTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAG 824
Query 171844 GATGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAG 171903
| ||||||||||| || || || |||||||| || | || | || ||||||||| ||
Sbjct 825 GTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAG 884
Query 171904 GAACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAG 171963
| || || || || || |||||||| || ||||| | || || ||| | || ||
Sbjct 885 GTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTT 944
Query 171964 CAAACTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGT 172023
|| |||||||| || ||||| || || |||| | || | | | ||| | | ||||
Sbjct 945 GCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGT 1004
Query 172024 TCCTATGGGGACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTAT 172083
| || ||||| ||||| |||||||||||| || || |||| |||||||||||| ||||
Sbjct 1005 TACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTAT 1064
Query 172084 GGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTG 172143
|| ||||| || | || || | || | | | |||||||| ||| | | || ||||
Sbjct 1065 GGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTG 1124
Query 172144 AGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTG 172203
| |||| || |||| | || ||||| || ||| | |||||||| | ||||
Sbjct 1125 AACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTG 1184
Query 172204 CAGTATTCACGAGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCAC 172263
| || || |||| ||||| |||||| ||||||| | |||||||||| || |
Sbjct 1185 CTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGC 1244
Query 172264 CTTCATTTGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATA 172323
|| |||||||| || || || ||||| | || | || | || || || || |||
Sbjct 1245 CTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATT 1304
Query 172324 TAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTAT 172383
|| | || ||||||||||||||||| || || ||| |||| || | || | ||||
Sbjct 1305 GGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTAT 1364
Query 172384 GTGCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTG 172443
| || || |||||||| || ||| | || || || | |||||| ||
Sbjct 1365 GCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGA---------------TG 1409
Query 172444 AAGGTAAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTT 172503
| | | | ||| |||| ||| | || || | || || || | ||||||||||
Sbjct 1410 --GTGATGGTGCAA-ATACA---TTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTT 1463
Query 172504 ATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACA 172563
|| ||| | || |||||| | || |||||||| || ||||| | || ||||| || |
Sbjct 1464 ATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATA 1523
Query 172564 AAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTA 172623
|| | | ||||| ||| ||||||| || ||||| || | ||| | |||| ||
Sbjct 1524 AACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTC 1583
Query 172624 TAGGTATCGTAGGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAA 172683
| || | || ||| | || | ||||| | || || ||||| || || || || ||
Sbjct 1584 TTGGAGTAGTCGGTTTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCC 1643
Query 172684 GAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAG 172743
| ||||| ||||| ||||| ||||| || ||||| ||||| || |||||| | || ||||
Sbjct 1644 GTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAG 1703
Query 172744 GTATGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAG 172803
|||| | || |||||| | || ||||| || ||||| ||| || | ||||| || |
Sbjct 1704 GTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGG 1763
Query 172804 AAGTCTTGCCACGAGGCAACGCACTATAA 172832
| || | ||||| || ||||| || |||
Sbjct 1764 AGGTTCTACCACGTGGAAACGCTCTTTAA 1792
>seq32303
Length=834
Score = 288 bits (318), Expect = 1e-72
Identities = 443/632 (70%), Gaps = 0/632 (0%)
Strand=Plus/Minus
Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854
||||| || | ||||| |||||| ||||| |||||||| || | || ||||| |||
Sbjct 736 TTTGATATTATGGATGACTGGTTACGTAGAGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 677
Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914
|| || || || |||||||| || | || | || ||||||||| ||| || || ||
Sbjct 676 CTATTGCTCTTTCCTTGTGCCTATTTCGCCTTAGGTGGTTGGTTCACAGGTACAACCTTT 617
Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974
|| || |||||||| || ||||| | || || ||| | || ||| ||||| |||
Sbjct 616 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAACTTCTTA 557
Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034
||||| ||||| || || |||| | || | | | ||| | | ||||| ||||||||
Sbjct 556 ACTGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 497
Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094
||||| |||||||||||| || || |||| ||||||||||| || |||| |||||
Sbjct 496 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGCCAATTAGGTGGTCTGTGGACTTTTGTG 437
Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154
|| | || || | || ||||| |||||||||||| | | || ||||| |||| ||
Sbjct 436 GCTCTCCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 377
Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214
|||| | || ||||| || ||| | ||||| || | ||||| || ||
Sbjct 376 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTT 317
Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGT 172274
| || || || |||||| |||||||| | |||||||||| || ||| ||||||
Sbjct 316 TCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 257
Query 172275 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 172334
|| ||||| || ||||| | || | || | || || || || ||| || | ||
Sbjct 256 GTAGCAGCTATATTTCGCTTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 197
Query 172335 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 172394
||||||||||||||||| || || ||| || | || | || | ||||| || || |||
Sbjct 196 CCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTCCTATGCGCTATTCAT 137
Query 172395 GGTGCAACAGTACAGAACACATTGTATGAAGA 172426
||||| || ||| | || || || | ||||||
Sbjct 136 GGTGCTACCGTAGAAAATACTTTATTTGAAGA 105
>seq31551
Length=1713
Score = 250 bits (276), Expect = 3e-61
Identities = 318/432 (74%), Gaps = 8/432 (2%)
Strand=Plus/Minus
Query 171233 TTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGTGACATCTTCTCTAATCAGA 171292
||||| || ||| |||||||| ||||| ||||| | || || ||| | | |||||
Sbjct 1149 TTCGGCGGCTCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGG 1090
Query 171293 GAGACAACTGAGAACGAGAGT-CAAAACTACGGCTATAAGTTCGGACAAGAAGAAGAAAC 171351
|| || || || || || | | || || || || | ||||| ||||||||||||||
Sbjct 1089 GAAACCACAGAAAATGAATCTGCTAATGTA-GGTTACAGATTCGGTCAAGAAGAAGAAAC 1031
Query 171352 ATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTCCAGTATGCATCATT 171411
||||| || || ||||||||||| || || || |||| |||||||| ||||| |
Sbjct 1030 TTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTGT 971
Query 171412 CAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTT 171471
|||||| |||||||| ||||| |||||||| |||| | |||||||| || | |||||
Sbjct 970 CAACAATTCTCGTTCCTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTT 911
Query 171472 AACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGATTCAACTTCAACCAATC 171531
|| || | ||||| | || ||||| || || | ||||| ||||| |||||||||||
Sbjct 910 CACTGCTTTAGGTATTAGCACCATGGCTTTTCACTTAAACGGTTTCAATTTCAACCAATC 851
Query 171532 AGTTGTAGAT-GCAAACGGAAAGAT--TGTA---CCAACATGGGGAGATGTTCTTAACAG 171585
|| || ||| | || | |||| | |||| || |||| ||| | ||||| |
Sbjct 850 TGTAGTTGATAGTCAAGGAAAAGGTCATGTAATTAATACCTGGGCTGATCTCATTAACCG 791
Query 171586 AGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCT 171645
|| |||||||| |||||||||||||||||| | ||||| || |||||||| ||||||||
Sbjct 790 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCCCTAGACCT 731
Query 171646 AGCATCTGCTGA 171657
||| ||| |||
Sbjct 730 AGCTGCTGTTGA 719
>seq31730
Length=297
Score = 168 bits (186), Expect = 8e-37
Identities = 215/296 (73%), Gaps = 0/296 (0%)
Strand=Plus/Plus
Query 170996 ATGGGTAGACAGTGGGAACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCA 171055
|||||| | |||||||||| | | | || || ||| | |||||||| ||| |||
Sbjct 1 ATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCA 60
Query 171056 TACTCAGCACCTGTATCTGCAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGT 171115
|| ||||| ||||| | || || ||| || ||| | | || ||| | ||||| ||
Sbjct 61 TATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGA 120
Query 171116 TCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTC 171175
|| |||||||||||||| ||||| || || ||||| |||||||||||| | || |||
Sbjct 121 AGTTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTC 180
Query 171176 CAAGCAGAACACAACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTC 171235
|| || || |||||||| || |||||||| || || ||| ||| ||||| ||| | |||
Sbjct 181 CAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTC 240
Query 171236 GGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGTGACATCTTCTCTAATCAG 171291
|| || || |||||||| ||||| ||||| | || || ||| | | |||||
Sbjct 241 GGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAG 296
>seq31523
Length=225
Score = 161 bits (178), Expect = 1e-34
Identities = 151/192 (79%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 171332 TTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTA 171391
||||| ||||| |||||||| ||||| || || ||||||||||| || || || ||||
Sbjct 34 TTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTG 93
Query 171392 ATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTC 171451
|||||||| ||||| |||||||| |||||||| |||||||||||||| |||| |
Sbjct 94 ATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGG 153
Query 171452 CCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAAC 171511
|||||||| || | ||||| || || | |||||| | || ||||| |||||||| ||
Sbjct 154 CCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAAT 213
Query 171512 GGATTCAACTTC 171523
|| ||||| |||
Sbjct 214 GGTTTCAATTTC 225
>seq34854
Length=328
Score = 147 bits (162), Expect = 2e-30
Identities = 207/288 (72%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 170725
|| ||| | ||| |||| ||| || || || | ||| |||| ||||||||||| ||
Sbjct 32 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 91
Query 170726 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 170784
|||||||| | ||| | || || || || || ||| | || ||||| ||||||||
Sbjct 92 ATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCC 150
Query 170785 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAA 170844
|||||| ||||| || || || | ||||| ||| | || ||| | | ||||| |||||
Sbjct 151 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 210
Query 170845 CATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCAT 170904
|| ||||| ||||| | |||| |||| || ||||| || || || || || ||
Sbjct 211 TATTATCTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 270
Query 170905 CTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTA 170952
|||||||| || || | || || ||||| |||||||| ||||||||
Sbjct 271 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTTA 318
>seq77
Length=8408033
Score = 125 bits (138), Expect = 8e-24
Identities = 207/299 (69%), Gaps = 0/299 (0%)
Strand=Plus/Plus
Query 170771 TTCATCGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTC 170830
||||| |||||||||||| | ||||| || || || | |||| || | | ||| |
Sbjct 2698695 TTCATGGCTGCTCCTCCAATAGATATTGATGGTATTCGCAAACCTATTTCCAGATCTCTA 2698754
Query 170831 TTATATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTA 170890
| ||||| ||||| || ||||| ||||| | ||||| |||| || ||||| ||
Sbjct 2698755 CTTTATGGAAACAATATTATCTCCGGTGCCATTATTCCAACTTCTTCAGCTATAGGTTTG 2698814
Query 170891 CACTTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCT 170950
|| | || || || | ||||||| | | | || || ||||| |||||||| ||||||
Sbjct 2698815 CATATTTACCCAATGTAGGAAGCATCATCAGTTGATGAATGGTTATACAACGGCGGTCCT 2698874
Query 170951 TACCAGTTAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGG 171010
|| || || || | | |||||| | |||| | || ||||||||| | |||||
Sbjct 2698875 TATGAGCTAATTGTACTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 2698934
Query 171011 GAACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGT 171069
||||| | | ||||| ||| | ||||||| ||| ||||| ||||| |||||
Sbjct 2698935 GAACTTAGTTTTCGTCTAGGTATGTGCTCTTGGATTGCTGTTGCATATTCAGCTCCTGT 2698993
>seq155
Length=2184526
Score = 123 bits (136), Expect = 3e-23
Identities = 336/506 (66%), Gaps = 15/506 (3%)
Strand=Plus/Minus
Query 171847 GGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAA 171906
|||| |||| | || || |||||||| || | || | | |||||| || ||| |
Sbjct 253085 GGTCCGGTCAACTGCTCTTTCCTTGTGCATATTTCGCTTTAAGTGGTTGGCTCACAGGTA 253026
Query 171907 CTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAA 171966
| || || || || ||| |||| || |||| | || || ||| | || ||| |
Sbjct 253025 CAACCTTTGTAACTTCACGGTATACTCATGAATTGGCTAGTTCCTATTTGGACGGATGTA 252966
Query 171967 ACTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCC 172026
|||| ||||| || ||||| | || |||| | || | | | ||| | | ||||| |
Sbjct 252965 ACTTCTTAACCGCCGCAGTTTTTACTCCTGTTAATAGTTTAGCACATCCTTTGTTGTTAC 252906
Query 172027 TATGGGGACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGA 172086
|||||| | ||| ||||||||||| || ||| | | ||||||||| | | ||||
Sbjct 252905 TATGGGATCTTGATGCACAAGGAGA--TTTTAC--TCATGTCAATTAGGCGATCCGTGGA 252850
Query 172087 ACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGA 172146
||||| || | ||||| | ||| ||| |||||||||||| | | || |||||
Sbjct 252849 CTTTTGTGGCTCTCCATGGCGCTTTTAAACTAATAGGTTTCATG-TACGTCAATTTGAAC 252791
Query 172147 TTGCAGGACTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAG 172206
|||| | |||| | || ||||| || ||| | |||||| | |||| |
Sbjct 252790 TTGCTCAATCTGTTCAATTGCGACCTTATAATGCAATCACATTCTATGGTCCAATTGTTG 252731
Query 172207 TATTCACGAGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTT 172266
| || | | || || ||| ||||| |||||||| ||||||||||| ||||||
Sbjct 252730 TTTT----TGTA-CTCTC-AATTTATCCGCTAGGTCAGTCCAGTTGGTTCTTTGCACCTA 252677
Query 172267 CATTTGGTGTCGCAGCAATCTTT--CGTTATATTTTATTCATACAGGGTTTCCACAATAT 172324
|||||| | ||||| || ||| | |||| ||| || | || || || || ||
Sbjct 252676 ATTTTGGTATAGCAGCTATATTTTGCTTTATCATTTCTT--TCCAAGGGTTTCATTATCG 252619
Query 172325 AACTCTTAATCCATTTCATATGATGG 172350
|| | || |||||||| |||||||
Sbjct 252618 GACATTGAACCCATTTCAAATGATGG 252593
>seq231
Length=1485859
Score = 122 bits (134), Expect = 1e-22
Identities = 205/297 (69%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 172494 GAAGAAACTTATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCA 172553
|||||||| ||| ||| | || ||||| | || ||||| || || ||||| | ||
Sbjct 476701 GAAGAAACCTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 476642
Query 172554 TTTTCAAACAAAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGG 172613
||||| || ||| | | ||||| || ||||||| || ||||| || | ||| | |||
Sbjct 476641 TTTTCCAATAAATGTTGGTTACATTTGTTTATGTTATTTGTACCGGTAACCGGTTTATGG 476582
Query 172614 ACATCATCTATAGGTATCGTAGGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCT 172673
| || | || | || ||||| || | ||||| | || || |||| || |
Sbjct 476581 ATGAGTGCTCTTGGAGTGGTCGGTCTGGCTTTGAACCTACGTGCCTATAACTTCGTTTGC 476522
Query 172674 CAAGAGATAAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTT 172733
|| ||||| | ||||||||||| || || |||||||| ||||||| || || |||||
Sbjct 476521 CAGGAGATCTGTGCAGCAGAAGATCCTGAATTTGAAACTTTCTACATCAAAAATATTCTC 476462
Query 172734 CTTAATGAAGGTATGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTT 172790
| || ||| |||| | || | |||| | || |||||||| ||||| ||| ||
Sbjct 476461 TTAAACGAAAGTATTTGTGCTTAGATGGCGGCTCAAGATCAACCTCATGAAAACCTT 476405
>seq85
Length=5226098
Score = 116 bits (128), Expect = 4e-21
Identities = 126/167 (75%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 171482 GGTATCTGTACAATGGCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT 171541
|||||| | || ||||| |||||||| || || ||||| ||||||||||| || || |||
Sbjct 1123353 GGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCCGTAGTTGAT 1123294
Query 171542 GCAAACGGAAAGATTGTACCAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATG 171601
| || | | ||||||| ||| || |||| | || |||||||| |||
Sbjct 1123293 AGTCAAGGTCGTGTAATTAATACATGGGTTGATATTATTAATTGTGCTAACCTTGGTATG 1123234
Query 171602 GAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 171648
||||||||||||||| | ||||| || |||||||| |||||||||||
Sbjct 1123233 GAAGTTATGCATGAATGTAATGCTCATAACTTCCCTCTAGACCTAGC 1123187
>seq134
Length=15115857
Score = 107 bits (118), Expect = 2e-18
Identities = 185/265 (70%), Gaps = 3/265 (1%)
Strand=Plus/Minus
Query 170711 TGGTTTGGTGTCTTAATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGC 170769
||||||||||| || |||||||| | ||| | ||| | ||| || || ||| | ||
Sbjct 3765998 TGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACT-CAGCTTCTATATTTATTATTGC 3765941
Query 170770 ATTCATCGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTT 170829
||||| | |||||||||||| ||||| || || ||| | | || || | || ||| |
Sbjct 3765940 CTTCATTGTTGCTCCTCCAGTTGATATTGATGGTATCTGTAAGCCTATTTCTGGATCTCT 3765881
Query 170830 CTTATATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATT 170889
| ||||||||||| || || | || || | |||| || | | | ||||| ||
Sbjct 3765880 ACTTTATGGTAACAATATTATTTATGATGGCATTATTCCTACTCCTACAACTATAGGTTT 3765821
Query 170890 ACACTTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCC 170949
|| || || | || ||||||||||| || | || || ||||| ||||||| ||||
Sbjct 3765820 GCATTTTTACTCAATATGGGAAGCAGCATCTGTTGATGAATGGTTATACAACGACAGTCC 3765761
Query 170950 TTACCAGTTAGTTATTTTCCACTTC 170974
||| || || || || | ||||||
Sbjct 3765760 TTATGAGCTAATTGTTCTACACTTC 3765736
>seq151
Length=2833985
Score = 100 bits (110), Expect = 3e-16
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 171344 GAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAATCTTCCAGTAT 171403
|||||||| ||||| || || ||||||||||| || || || |||| ||||||| |||
Sbjct 2328018 GAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCTATAT 2328077
Query 171404 GCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTG 171446
|| |||||||| |||||||| |||||||||||||| ||||
Sbjct 2328078 GCTAGTTTCAACAATTCTCGTTCGTTACACTTCTTCCTAGCTG 2328120
>seq31544
Length=164
Score = 86.0 bits (94), Expect = 7e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 171563 ACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAAT 171622
|| |||| ||| || |||| | || || ||||| |||||||||||||||||| | |||
Sbjct 38 ACCTGGGCTGATATTATTAATCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAAT 97
Query 171623 GCACACAACTTCCCACTAGACCTAGCATCTGCTGA 171657
|| || |||||||| ||||||||||| ||| |||
Sbjct 98 GCTCATAACTTCCCTCTAGACCTAGCTGCTGTTGA 132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570009498776640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |