Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq652 122 7e-23
seq116 114 1e-20
seq203 111 1e-19
seq22 105 5e-18
seq569 104 2e-17
seq87 100 2e-16
seq49 100 2e-16
seq91 84.2 2e-11
>seq652
Length=2384379
Score = 122 bits (134), Expect = 7e-23
Identities = 157/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| || ||||| || || ||||| || ||||||| || | ||||
Sbjct 465725 AGGACCAAGTGCAGAGTTGACTCTTTCTGGATGTTATAATCGGCCAGTGTCCTTCCGTCT 465666
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|||| ||| || || ||| |||| |||| ||| ||||| ||| | |||||| |||||
Sbjct 465665 TCCAGTTGCTTCCCGGCAAAAATCAGCCTCTGCTGGTCTGGAGGGATGCCCTCCTTGTCC 465606
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| ||||| |||||| | | | | ||||| |||| |||| |||||||
Sbjct 465605 TGGATCTTTGC--CTTCACATTGTCGATGGTGTCTGAACTCTCCACCTCCAGAGTGATGG 465548
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
| ||||||||||| || ||||||||||||||||||
Sbjct 465547 TCTTTCCGGTCAGAGTCTTGACAAAAATCTGCATT 465513
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| || || ||||||||||| || ||||| || || |||| || | | ||
Sbjct 465270 CAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAATCCGCCAAAGTCCTACCATC 465211
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
||| | |||||| || ||| | ||||||| || || || || | ||| || |||||
Sbjct 465210 CTCAAGTTGTTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGAATGCCTTCCTTGTC 465151
Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||||| | || || | | | | ||||| | ||| ||||| |||||| ||
Sbjct 465150 CTGAATTTTCGCTTTGACATTGTCAATGGTGTCAGAGCTCTCAACTTCCAAGGTGATCGT 465091
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| || || || || |||||||| || ||||||
Sbjct 465090 CTTCCCAGTTAGGGTCTTGACAAAGATTTGCATT 465057
>seq116
Length=10441785
Score = 114 bits (126), Expect = 1e-20
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || ||||| || || | || |||||||||||||| || |||||||| |||||
Sbjct 4712072 CCTCCGCGGAGCCTGAGCACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCG 4712131
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || ||||||| | || || || || | || || ||||| || || |||
Sbjct 4712132 AGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGAGGG 4712191
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||| ||||| || || || ||| || | | | | |||||| | ||||
Sbjct 4712192 ATGCCCTCCTTGTCCTGGATCTTAGC--CTTGACGTTGTCGATGGTGTCGGAGCTCTCCA 4712249
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| |||||||| || |||||||| || ||||| || ||||||||
Sbjct 4712250 CCTCCAGCGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4712298
Score = 111 bits (122), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || ||||| || || | || |||||||||||||| || ||||||||||||||
Sbjct 4712300 CCTCCACGGAGCCTGAGCACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 4712359
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | ||||||| | || ||||| || | || || ||||| || || |||
Sbjct 4712360 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 4712419
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||| ||||| || || || ||| || | | | | |||||| | |||
Sbjct 4712420 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCGGAGCTCTCGA 4712477
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|| | |||||||| || |||||||| || ||||| || |||||||| ||
Sbjct 4712478 CCTCGAGCGTGATGGTCTTCCCGGTCAGGGTCTTGACGAAGATCTGCATCTT 4712529
Score = 109 bits (120), Expect = 4e-19
Identities = 166/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || |||||||| || | || |||||||||||||| || |||||||| |||||
Sbjct 4711844 CCTCCGCGGAGCCTCAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCGGCG 4711903
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || ||||||| | || || || || | || || ||||| || ||| ||
Sbjct 4711904 AGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 4711963
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-C 16885
| |||||| ||||| || || || ||| || | | | |||| ||| |||| |
Sbjct 4711964 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACGTTATCGATCGTGT--CCGAGCTCTC 4712019
Query 16886 G-TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || | ||||||||||| |||||||| || ||||| || ||||||||
Sbjct 4712020 GACCTCGAGCGTGATGGTTTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4712070
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || ||||| || || | || |||||||||||||| || ||||||||||||||
Sbjct 4726287 CCTCCGCGGAGCCTGAGCACGAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 4726228
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | ||||||| | || || || || | || || ||||| |||||| |||
Sbjct 4726227 AGGGTACGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 4726168
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||| || ||||| || | ||| || | | | | |||||| | |||
Sbjct 4726167 ATGCCTTCCTTGTCCTGTATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACC 4726108
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|| | |||| ||| || |||||||| || ||||| || |||||||| ||
Sbjct 4726107 TCGAGCGTGACGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATCTT 4726058
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
||||| || |||||||| || || ||||||||||| | ||| | ||||||| | ||
Sbjct 4726947 TGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 4726888
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|| || || | || |||||||| || ||| || | ||||| ||||| ||| | |
Sbjct 4726887 TTCCCGGCGAAGATGAGCCGCTGCTGATCCGGCGGGATCCCCTCCTTGTCCTGAATCTTC 4726828
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||| | | | | ||||| | |||| |||| ||||| || || || |||
Sbjct 4726827 GCCTTCACATTGTCGATCGTGTCCGAGCTCTCCACCTCCAGCGTGATCGTCTTCCCTGTC 4726768
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || ||||||||
Sbjct 4726767 AGGGTCTTCACGAAGATCTGCAT 4726745
>seq203
Length=8626763
Score = 111 bits (122), Expect = 1e-19
Identities = 158/217 (73%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || ||||| |||||||| || ||||||||||| || | ||| | | |||
Sbjct 5731053 AGCACCAGGTGGAGCGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTCCCATCC 5730994
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|||| || || || || | || || | |||||||||| || | ||||| |||||
Sbjct 5730993 TCCAGCTGCTTACCGGCGAAGATCAGTCTCTGTTGGTCCGGTGGGATCCCCTCCTTGTCT 5730934
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CGTT-TCCACGGTGAT 16899
|| ||||| ||| || | | | ||||| || |||| || |||| ||||||
Sbjct 5730933 TGGATCTTTGC--CTTAACATTATCAATCGTGTC--CGAGCTCTCGACCTCCAAGGTGAT 5730878
Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
||||||||| ||||| || ||||||||||||||||||
Sbjct 5730877 GGTTTTTCCCGTCAGGGTCTTGACAAAAATCTGCATT 5730841
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || || |||||||| || ||||||||||||| || || | || || | ||||
Sbjct 5730816 TGGAGGGTCGATTCCTTTTGGATATTGTAGTCGGCCAGTGTCCTGCCATCTTCAAGTTGT 5730757
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|| |||||| | || |||| || |||||| ||| | ||||||||||| |||||
Sbjct 5730756 TTACCCGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGAATTTTA 5730697
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||| | | | | |||||| | || || | || || || || || ||
Sbjct 5730696 GCCTTCACATTGTCGATGGTGTCGGAGCTTTCGACCTCGAGAGTAATTGTCTTCCCAGTA 5730637
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || || || |||||||||||
Sbjct 5730636 AGAGTCTTCACGAAAATCTGCAT 5730614
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || ||||| || || ||||| ||||| || | || || | ||
Sbjct 5730597 AGCACCAAGTGGAGAGTAGACTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTGCCATCT 5730538
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || ||||| || | ||||| | ||| |||||| || | ||||| |||||
Sbjct 5730537 TCAAGCTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCT 5730478
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCT--CCGTTTCCACGGTGATGG 16901
||||| | ||| || | | | | ||||| || ||| || ||||| || ||||
Sbjct 5730477 TGAATTTTCGCCTTAACATTGTCAATGGTGTC--CGAGCTTTCCACTTCCAAAGTTATGG 5730420
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || ||||| ||||| || || |||||||||||
Sbjct 5730419 TCTTCCCGGTAAGCGTCTTCACGAAAATCTGCAT 5730386
>seq22
Length=3960921
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| | ||||| || || | || || ||||||||||| || ||||||||||||||
Sbjct 263339 CCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 263398
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| ||||||||| || || || || | || || ||||| |||||| |||
Sbjct 263399 AGCGTTCGCCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGG 263458
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||| ||||| || || || ||| || | | | | |||||| | ||||
Sbjct 263459 ATCCCCTCCTTGTCCTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCGGAGCTCTCCA 263516
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||||||| || ||||| || || ||||| || ||||||||
Sbjct 263517 CCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACGAAGATCTGCAT 263565
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| | |||||||| |||| || || || |||||||| || ||||||||||||||
Sbjct 262655 CCTCCCCTGAGCCTCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 262714
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | ||||| | || || || || | || |||| ||| |||||| ||
Sbjct 262715 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGA 262774
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||| ||||| || || || ||| || | | | | |||||| | |||
Sbjct 262775 ATACCCTCCTTGTCCTGGATCTTGGC--CTTGACGTTGTCAATGGTGTCGGAGCTCTCAA 262832
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||||||| || || |||| || ||||| || ||||||||
Sbjct 262833 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 262881
Score = 91.5 bits (100), Expect = 1e-13
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || || | || || || |||||||| || ||||||||||||||
Sbjct 262883 CCTCCACGAAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 262942
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | ||||||| | || || || || | || || ||||| |||||| |||
Sbjct 262943 AGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 263002
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-C 16885
| ||||| ||||| || || || ||| || | | | | |||| ||| |||| |
Sbjct 263003 ATCCCCTCCTTGTCCTGGATCTTGGC--CTTGACGTTGTCAATCGTGT--CCGAGCTCTC 263058
Query 16886 G-TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || | ||||||||| || ||||||| || ||||| || ||||||||
Sbjct 263059 GACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 263109
>seq569
Length=4400913
Score = 104 bits (114), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || |||||||||||||| | ||| | ||||||| | ||
Sbjct 2054725 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 2054784
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| || | || || ||||| |||||| ||| | ||||||||| || || ||
Sbjct 2054785 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCTTTATCCTGGATCTTG 2054844
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | | |||||| || |||| || | ||||||||| || || |
Sbjct 2054845 GC--CTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCCG 2054902
Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTT 16938
| || ||||| || || |||||||| ||
Sbjct 2054903 TTAGGGTTTTCACGAAGATCTGCATCTT 2054930
Score = 100 bits (110), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || |||||||||||||| | ||| | ||||||| | ||
Sbjct 2057976 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGC 2058035
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| || | || || ||||| ||||| ||| | |||||| ||||| || ||
Sbjct 2058036 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTG 2058095
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | | |||||| || |||| || | ||||||||| || || |
Sbjct 2058096 GC--CTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTCCCCG 2058153
Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTT 16938
| || ||||| || || |||||||| ||
Sbjct 2058154 TTAGGGTTTTCACGAAGATCTGCATCTT 2058181
>seq87
Length=12262769
Score = 100 bits (110), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || |||||||||||||| | ||| | ||||||| | ||
Sbjct 7257228 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCGTCCTCGAGCTGC 7257287
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| || | || || ||||| |||||| || | |||||| ||||| || ||
Sbjct 7257288 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTG 7257347
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| |||||| | | | | ||||||| | ||| || | ||| ||||| || || |
Sbjct 7257348 GC--CTTCACATTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTTATGGTCTTCCCCG 7257405
Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTT 16938
| || ||||| || || |||||||| ||
Sbjct 7257406 TTAGGGTTTTCACGAAGATCTGCATCTT 7257433
>seq49
Length=4798478
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| || || || | || |||| ||| || || ||||||||||| ||||||||||||||
Sbjct 2870369 CCCACCACGGAGACGGAGGACCAGATGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGC 2870310
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| || | | ||||| | ||| || || || | || | |||||| |||||| ||
Sbjct 2870309 CAGTGTCCGGCCATCCTCAAGTTGCTTCCCTGCGAATATCAACCGCTGCTGGTCCGGGGG 2870250
Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||| || || || || | | ||| || | | | ||||| | ||||
Sbjct 2870249 AATGCCTTCCTTATCCTGTATCTTCGACTTGACATTATCGATCGTGTCAGAGCTCTCCAC 2870190
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| |||||| || || ||||| || || || ||||||||||||||
Sbjct 2870189 TTCCAAGGTGATAGTCTTGCCGGTAAGGGTCTTCACAAAAATCTGCAT 2870142
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| |||| || ||||| || || ||||||||||| |||| || | |||||
Sbjct 2870581 AGGACCAAGTGCAAAGTCGACTCTTTCTGAATGTTGTAGTCAGCCAAAGTCCTCCCGTCC 2870522
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | ||| || || ||| | || |||| ||| |||||| || | |||||| || ||
Sbjct 2870521 TCGAGTTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTATCC 2870462
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | |||||| | | | | ||||| |||| |||| ||||||||
Sbjct 2870461 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAACTCTCCACCTCCAAAGTGATGGTC 2870402
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| ||||| || |||||||| ||||||||
Sbjct 2870401 TTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 2870370
Score = 93.3 bits (102), Expect = 3e-14
Identities = 151/215 (70%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| || || ||||||||||| || |||||||| || |||| || | | ||
Sbjct 2847058 CAGAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCCAAAGTCCTACCATC 2846999
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|| | ||||| || ||| ||||||||| ||| || ||| || | ||| || |||||
Sbjct 2846998 TTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTC 2846939
Query 16843 GGCAATTTGCTGC-TTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
||||| ||| || || | | | | ||||| | ||| ||||| ||||| |
Sbjct 2846938 CTGAATTT-TTGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCAACTTCCAAAGTGATTG 2846880
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|||| || || || || || |||||||| ||||||
Sbjct 2846879 TTTTCCCAGTAAGGGTCTTCACAAAAATTTGCATT 2846845
Score = 89.7 bits (98), Expect = 4e-13
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| || || || | || || | ||| ||||| ||||||||||| || ||||| |||||
Sbjct 2841313 CCCACCACGCAGACGGAGGACAAGATGGAGCGTCGACTCCTTTTGAATATTGTAATCGGC 2841254
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| || | | ||||| | ||||| || ||| |||| | |||||| ||||| ||
Sbjct 2841253 CAGTGTCCGGCCATCCTCGAGCTGTTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGG 2841194
Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG 16886
| ||| || ||||| || | | || || | | | |||| ||| |||| ||
Sbjct 2841193 AATGCCTTCCTTGTCCTGTATCTTCGCTTTGACATTATCAATCGTGT--CCGAGCTCTCG 2841136
Query 16887 -TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| ||||| || || || ||||| || || ||||||||||||||
Sbjct 2841135 ACTTCCAAAGTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAATCTGCAT 2841086
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || ||||| || || ||||| ||||| |||| || | ||||
Sbjct 2841525 AGGACCAAGTGTAGAGTCGACTCTTTCTGGATGTTATAGTCAGCCAAAGTCCTCCCGTCT 2841466
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || || || ||| | || |||| ||| ||||| || | |||||| || ||
Sbjct 2841465 TCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCCTCCTTATCC 2841406
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | |||||| | | | | ||||| |||| ||||| ||||| ||
Sbjct 2841405 TGGATCTTCGCCTTCACGTTGTCAATGGTGTCTGAACTCTCCACTTCCAAAGTGATAGTC 2841346
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||||||||| || |||||||| ||||||||
Sbjct 2841345 TTTCCGGTCAGGGTCTTGACAAAGATCTGCAT 2841314
>seq91
Length=4251426
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| | ||||||| |||| ||| || || ||||||||||| ||||| ||||| ||
Sbjct 285775 CCTCCCCTGAGCCTCAACACCAGATGAAGAGTCGACTCCTTTTGGATGTTATAGTCTGCA 285834
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | || |||||||| || || ||| |||| | |||||||||||| |||
Sbjct 285835 AGAGTTCGTCCATCTTCCAATTGCTTACCAGCAAAAATCAATCGCTGTTGGTCCGGAGGA 285894
Query 16829 ACGCCCTCTTTGTC 16842
| || || |||||
Sbjct 285895 ATACCTTCCTTGTC 285908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404908411324240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |