Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001 662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq5649 140 2e-28 seq22006 131 1e-25 seq1478 131 1e-25 seq1165 131 1e-25 seq195 131 1e-25 seq9178 127 1e-24 seq8768 127 1e-24 seq3210 127 1e-24 seq3006 127 1e-24 seq2225 127 1e-24 seq276 118 7e-22 seq49 107 1e-18 seq652 104 2e-17 seq13572 96.9 2e-15 seq22553 93.3 3e-14 seq7330 93.3 3e-14 seq3719 93.3 3e-14 seq9482 91.5 1e-13 seq74 87.8 1e-12 >seq5649 Length=13326 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3395 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3336 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3335 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3301 >seq22006 Length=341 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 266 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 207 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 206 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 172 >seq1478 Length=1309 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||| |||||||||| || |||||||| Sbjct 1301 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATGGTAGATAGGGACAGTGGGAATCTCGT 1242 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1241 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1207 >seq1165 Length=8953 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 4352 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 4293 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 4292 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 4258 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| |||| |||| |||||||||||||||||||||||| | Sbjct 2360 CTCTCTTTTCAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTC 2301 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 2300 GCCCGTATTTAGCCTT 2285 >seq195 Length=1358929 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 1339562 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 1339503 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1339502 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1339468 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||| || |||||||||||| | Sbjct 1357227 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTATTTGCTATCGGTCTCTC 1357168 Query 20007 GGTAATATTTAGCCTT 20022 | |||||||||||| Sbjct 1357167 GCCCATATTTAGCCTT 1357152 >seq9178 Length=525 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 107 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 48 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||| |||||||||||||||||||||||||||| Sbjct 47 TAATCTATTCATGCGCGTCACTAATTAGATGACGA 13 >seq8768 Length=1051 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| |||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 735 AAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 676 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 675 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 641 >seq3210 Length=410 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||| ||| ||||||||| |||| || |||||||| Sbjct 271 AAGCCCGTTCCCTTGGCTGTGGTTTTGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 212 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 211 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 177 >seq3006 Length=601 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 462 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 403 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||| ||||||||||||| Sbjct 402 TAATCCATTCATGCGCGTCACAAATTAGATGACGA 368 >seq2225 Length=7605 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||||||| || |||||||| Sbjct 6005 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGAGTAGTAGATAGGGACAGTGGGAATCTCGT 5946 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5945 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5911 >seq276 Length=2778623 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||||||||| | |||||||| Sbjct 2724972 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGATAGGGACAGTGAGAATCTCGT 2725031 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||| ||||||||| |||||| ||||||||||| Sbjct 2725032 TAATCTATTCATGCGCATCACTACTTAGATGACGA 2725066 Score = 84.2 bits (92), Expect = 1e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||| | |||||||| ||||||| |||||||| ||||||||||| |||||||||||| | Sbjct 2726964 CTCTATTTTCAAAGTCCTTTTCATCTTTCCCTTGCGGTACTTGTTTGCTATCGGTCTCTC 2727023 Query 20007 GGTAATATTTAGCCTT 20022 |||||||||||| Sbjct 2727024 ACCCATATTTAGCCTT 2727039 >seq49 Length=4798478 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || |||| ||||| ||||| |||||||| ||| || || || || ||||| | | Sbjct 2870140 CCTCCCCTCAGACGCAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTATAATCTGCC 2870081 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | | || |||| ||||| || ||||| || || | || ||||| | ||| Sbjct 2870080 AGAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2870021 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||||||| ||||||| || ||||| | || ||| || || |||||| Sbjct 2870020 ATGCCTTCTTTGTCCTGAATTTTTGCTTTGACATTGTCGATAGTGTCAGAGCTCTCAACT 2869961 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || ||||| || || | ||| || || || || ||||| Sbjct 2869960 TCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTGACAAAGATTTGCAT 2869914 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||||| ||| | |||||||||||| ||| |||||||| || |||||||||| | Sbjct 2846206 CCACCTCTCAGACGAAGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCC 2846147 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | || || || ||||| || || | || || || | ||| Sbjct 2846146 AGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 2846087 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || |||||||| ||| || ||| ||||| | | || || |||||||| Sbjct 2846086 ATTCCCTCTTTGTCTTGAATCTTGGCCTTGACATTATCAATCGTGTCCGAGCTTTCAACC 2846027 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||| || || || || | ||| ||||| || ||||||||| Sbjct 2846026 TCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATG 2845979 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || ||||||||||| | ||||| ||||| ||| |||||||| || ||||| | Sbjct 2869916 CATT-CCTCCTCTCAAACGGAGGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGT 2869858 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | | || | || || | ||| ||||| ||||| || | || || || || | Sbjct 2869857 CCGCTAGTGTCCGGCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCGCTGCTGGTCTG 2869798 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||| | |||||||||||| ||||| ||||||||| | | ||||| ||| | Sbjct 2869797 GGGGAATCCCTTCTTTGTCCTGGATTTTGGCCTTCACATTGTCAATGGTATCGGAACTCT 2869738 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || || | ||||| || || || || | || ||||| || ||||||||| Sbjct 2869737 CCACCTCAAGAGTAATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCATG 2869685 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/234 (69%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || ||||| | ||| | ||||| ||||| ||| |||||||| || ||||| | Sbjct 2840860 CATT-CCTCCTCTGAGACGGAGGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGT 2840802 Query 38146 CAGACAAAACACGTTCG-TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 | | ||| | | | || || | || || || ||||| || | || || || || Sbjct 2840801 CTG-CAAGCGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAACCGCTGCTGGTCT 2840743 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | ||||| |||||||||||| ||||| ||||||||| | | ||||| ||| Sbjct 2840742 GGGGGGATCCCTTCTTTGTCCTGGATTTTAGCCTTCACATTGTCAATGGTATCGGAACTC 2840683 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || | ||||| || || || || | ||| ||||| || ||||||||| Sbjct 2840682 TCGACCTCCAGAGTAATTGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 2840629 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | || ||| | || | ||| || || ||||||||||||||||||||| | | Sbjct 2841312 CCACCACGCAGACGGAGGACAAGATGGAGCGTCGACTCCTTTTGAATATTGTAATCGGCC 2841253 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | ||||| || ||||| || | || || || || | ||| Sbjct 2841252 AGTGTCCGGCCATCCTCGAGCTGTTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGGGGA 2841193 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| || || || ||||| | | || || || || ||| Sbjct 2841192 ATGCCTTCCTTGTCCTGTATCTTCGCTTTGACATTATCAATCGTGTCCGAGCTCTCGACT 2841133 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || ||||| || || |||| || ||||| || ||||||||| Sbjct 2841132 TCCAAAGTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAATCTGCATG 2841085 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | |||| ||| ||||| |||||||||||| ||||| || | | Sbjct 2870368 CCACCACGGAGACGGAGGACCAGATGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGCC 2870309 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | ||| || || || ||||| | || || || || | ||| Sbjct 2870308 AGTGTCCGGCCATCCTCAAGTTGCTTCCCTGCGAATATCAACCGCTGCTGGTCCGGGGGA 2870249 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| || ||| || || ||| ||||| | || || || || || ||| Sbjct 2870248 ATGCCTTCCTTATCCTGTATCTTCGACTTGACATTATCGATCGTGTCAGAGCTCTCCACT 2870189 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || ||||| || || || | ||| ||||| || ||||||||| Sbjct 2870188 TCCAAGGTGATAGTCTTGCCGGTAAGGGTCTTCACAAAAATCTGCATG 2870141 >seq652 Length=2384379 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| || | ||| | ||||| || || ||| ||||| ||||| || ||||||| | Sbjct 464600 CCACCCCTGAGACGGAGAACCAAGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGCC 464541 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 ||| ||| | || || | || || || ||||| || || | || || || | |||| Sbjct 464540 AAAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGG 464481 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| ||||| || || ||||||||| | || || ||| ||||||||| Sbjct 464480 ATTCCTTCCTTGTCTTGTATCTTGGCCTTCACATTGTCAACTGTGTCTGAACTTTCAACC 464421 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || || | |||||||||||| || ||||| Sbjct 464420 TCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACGAAAATTTGCAT 464374 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||| | ||| | |||||| ||||| || ||||| || |||||||| || | | Sbjct 464828 CCACCTCTGAGACGAAGCACCAAGTGAAGTGTTGATTCCTTCTGGATATTGTAGTCTGCC 464769 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | || || | || || || || || || | | ||| ||||| | ||| Sbjct 464768 AGGGTCCTACCATCCTCAAGCTGCTTGCCTGCGAAAATCAACCTTTGCTGATCTGGGGGA 464709 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| ||||| ||| ||||| | || || || ||||||||| Sbjct 464708 ATTCCCTCCTTGTCCTGGATTTTCGCCTTTACATTATCGATGGTGTCCGAACTTTCAACC 464649 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| ||||| || || || || | ||| ||||| |||||||||||| Sbjct 464648 TCTAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACAAATATCTGCATG 464601 >seq13572 Length=865 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| | Sbjct 681 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTC 622 Query 20007 GGTAATATTTAGCCTT 20022 | |||||||||||| Sbjct 621 GCCCATATTTAGCCTT 606 >seq22553 Length=245 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||| |||||||||||| | Sbjct 238 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGTGGTACTTGTTTGCTATCGGTCTCTC 179 Query 20007 GGTAATATTTAGCCTT 20022 | |||||||||||| Sbjct 178 GCCCATATTTAGCCTT 163 >seq7330 Length=199 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||| |||||| |||||||||||| | Sbjct 80 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTTCTTGTTTGCTATCGGTCTCTC 21 Query 20007 GGTAATATTTAGCCTT 20022 | |||||||||||| Sbjct 20 GCCCATATTTAGCCTT 5 >seq3719 Length=1027 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| ||||||||||| |||| ||||||| | Sbjct 92 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTACCGGTCTCTC 33 Query 20007 GGTAATATTTAGCCTT 20022 | |||||||||||| Sbjct 32 GCCCATATTTAGCCTT 17 >seq9482 Length=240 Score = 91.5 bits (100), Expect = 1e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 19950 TCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGT 20009 ||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| || Sbjct 118 TCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCC 59 Query 20010 AATATTTAGCCTT 20022 |||||||||||| Sbjct 58 CATATTTAGCCTT 46 >seq74 Length=10145792 Score = 87.8 bits (96), Expect = 1e-12 Identities = 75/93 (81%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| ||||||||| |||||||||| | |||||| | |||| || |||||||| Sbjct 448055 AAGCCCATTCCCTTGGTTGTGGTTTCGTTGAATAGTACACAGGGATAGTGGGAATCTCGT 448114 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 |||||| || |||| ||||| |||||| ||||| Sbjct 448115 TAATCCATTTATGCACGTCATTAATTACATGAC 448147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334798707020456