Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq203 113 4e-20
seq49 111 1e-19
seq116 100 2e-16
seq22 95.1 1e-14
seq652 87.8 2e-12
seq569 86.0 5e-12
>seq203
Length=8626763
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || |||||||| |||||| || || || ||||||||| || || |||
Sbjct 5730126 GTAGACTCCTTCTGAATGTTATAATCGGCCAAGGTTCGGCCATCTTCAAGCTGCTTGCCA 5730067
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| || | ||| ||||||||||| || ||||| ||||| ||| ||| ||||
Sbjct 5730066 GCAAAGATAAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGAATTTTTGCTTTT 5730007
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | ||||||| | ||| || || | ||| | || ||||| || || |||
Sbjct 5730006 ACATTATCGATTGTGTCGGAGCTTTCCACCTCAAGGGTGATTGTCTTGCCCGTAAGGGTT 5729947
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| || |||||
Sbjct 5729946 TTCACAAAGATTTGCAT 5729930
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| ||||| ||||| || ||||| ||| || || | ||||||||||||||||||
Sbjct 5730810 GTCGATTCCTTTTGGATATTGTAGTCGGCCAGTGTCCTGCCATCTTCAAGTTGTTTACCC 5730751
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| || | || |||||||||||||| || |||||||| ||| || ||
Sbjct 5730750 GCAAAGATCAGCCTTTGCTGGTCCGGAGGAATACCCTCTTTGTCCTGAATTTTAGCCTTC 5730691
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||||| | |||||| || | || | || || || || |||||
Sbjct 5730690 ACATTGTCGATGGTGTCGGAGCTTTCGACCTCGAGAGTAATTGTCTTCCCAGTAAGAGTC 5730631
Query 114366 TTTACAAAAATCTGCAT 114382
|| || |||||||||||
Sbjct 5730630 TTCACGAAAATCTGCAT 5730614
Score = 98.7 bits (108), Expect = 8e-16
Identities = 164/236 (69%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 114147 TTACAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTG 114206
||||||| || ||||| || | | || | || | |||||| || || |||||||||
Sbjct 5731075 TTACAAA--CCCCCACGAAGGCGGAGCACCAGGTGGAGCGTAGACTCCTTCTGAATGTTG 5731018
Query 114207 TAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGG 114266
|| || | || | ||| || || || ||||| ||| |||| || | |||||||
Sbjct 5731017 TAGTCAGCAAGGGTCCTCCCATCCTCCAGCTGCTTACCGGCGAAGATCAGTCTCTGTTGG 5730958
Query 114267 TCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTG 114326
||||| || || || || ||||| |||||| || | | |||| ||||| | |
Sbjct 5730957 TCCGGTGGGATCCCCTCCTTGTCTTGGATCTTTGCCTTAACATTATCAATCGTGTCCGAG 5730898
Query 114327 GATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||||| |||| ||| | ||||| || ||||| || || ||||||||||||||
Sbjct 5730897 CTCTCGACCTCCAAGGTGATGGTTTTTCCCGTCAGGGTCTTGACAAAAATCTGCAT 5730842
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| ||||| || ||||| || || | ||| | ||||||||| || || |||
Sbjct 5730582 GTAGACTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTGCCATCTTCAAGCTGCTTGCCA 5730523
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| || | ||| |||||||| ||||| || || ||||| ||| ||| | ||
Sbjct 5730522 GCGAAGATAAGTCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGAAT-TTTCGCCTT 5730464
Query 114306 AGCTGT-TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | | |||| |||||| | | ||| || |||| || | || || ||||| || ||
Sbjct 5730463 AACATTGTCAATGGTGTCCGAGCTTTCCACTTCCAAAGTTATGGTCTTCCCGGTAAGCGT 5730404
Query 114365 TTTTACAAAAATCTGCAT 114382
|| || |||||||||||
Sbjct 5730403 CTTCACGAAAATCTGCAT 5730386
>seq49
Length=4798478
Score = 111 bits (122), Expect = 1e-19
Identities = 165/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || | ||| | ||| || || |||||||| |||||||||
Sbjct 2841315 ATCCCACCACGCAGACGGAGGACAAGATGGAGCGTCGACTCCTTTTGAATATTGTAATCG 2841256
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || || ||||| || || | || | ||||| ||||| ||
Sbjct 2841255 GCCAGTGTCCGGCCATCCTCGAGCTGTTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGG 2841196
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||||| ||| | | |||| ||||| | | |||
Sbjct 2841195 GGAATGCCTTCCTTGTCCTGTATCTTCGCTTTGACATTATCAATCGTGTCCGAGCTCTCG 2841136
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|| |||| || | || ||||| |||||||| || ||||||||||||||| ||
Sbjct 2841135 ACTTCCAAAGTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAATCTGCATGCCT 2841082
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232
||| || |||| || ||||| ||||| ||||||||||| || || || ||| ||
Sbjct 2840383 AACCAAGTGTAGGGTTGATTCCTTTTGGATGTTGTAATCAGCCAGGGTGCGCCCATCCTC 2840324
Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292
|| || || ||||| ||||||| | ||| ||||| ||||| || || || |||||
Sbjct 2840323 GAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCCTTGTCTTG 2840264
Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352
|||||| || | | ||||| ||||| | | ||| || || | ||| | || ||
Sbjct 2840263 AATCTTGGCCTTGACATTATCAACCGTGTCCGAGCTTTCAACCTCGAGGGTAATGGTCTT 2840204
Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|||||| || || || ||||| |||||||||
Sbjct 2840203 GCCGGTGAGGGTCTTCACAAAGATCTGCATG 2840173
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
|| ||||| | || ||||| ||||| ||||||||||| || || || ||| ||
Sbjct 2846188 ACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCCAGGGTGCGCCCATCCTCG 2846129
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293
|| || || ||||| ||||||| | ||| ||||| ||||| || || |||||||| |
Sbjct 2846128 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCTTTGTCTTGA 2846069
Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353
||||| || | | |||| ||||| | | ||| || || | ||| | || |||
Sbjct 2846068 ATCTTGGCCTTGACATTATCAATCGTGTCCGAGCTTTCAACCTCGAGGGTAATGGTCTTG 2846009
Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
||||| || || || ||||| |||||||||
Sbjct 2846008 CCGGTGAGGGTCTTCACAAAGATCTGCATG 2845979
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232
||| || |||| || ||||| || || ||||||||||| || || || ||| ||
Sbjct 2869667 AACCAAGTGTAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAGGGTGCGCCCATCCTC 2869608
Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292
|| || || ||||| ||||||| | ||| ||||| ||||| || || || |||||
Sbjct 2869607 GAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCCTTGTCTTG 2869548
Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352
|||||| || | | ||||| ||||| | | ||| || || | ||| | || ||
Sbjct 2869547 AATCTTGGCCTTGACATTATCAACCGTGTCCGAGCTTTCAACCTCAAGGGTAATGGTCTT 2869488
Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|||||| || || || ||||| |||||||||
Sbjct 2869487 GCCGGTGAGGGTCTTCACAAAGATCTGCATG 2869457
Score = 102 bits (112), Expect = 7e-17
Identities = 163/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || | ||| | || || || |||||||||||||| |||
Sbjct 2870371 ATCCCACCACGGAGACGGAGGACCAGATGGAGAGTCGACTCCTTTTGAATGTTGTAGTCG 2870312
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| |||||||| || || ||| | || | ||||| ||||||||
Sbjct 2870311 GCCAGTGTCCGGCCATCCTCAAGTTGCTTCCCTGCGAATATCAACCGCTGCTGGTCCGGG 2870252
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| || || ||||| || | | || | ||||| | | ||
Sbjct 2870251 GGAATGCCTTCCTTATCCTGTATCTTCGACTTGACATTATCGATCGTGTCAGAGCTCTCC 2870192
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|| |||| ||| | || |||||||| || || || ||||||||||||||| ||
Sbjct 2870191 ACTTCCAAGGTGATAGTCTTGCCGGTAAGGGTCTTCACAAAAATCTGCATGCCT 2870138
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || | ||| | || || || ||||||||||||||||||
Sbjct 2847303 ATCCCACCACGCAGACGGAGGACAAGATGGAGAGTCGACTCCTTTTGAATGTTGTAATCG 2847244
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| | ||||| || || || | || | ||||| ||||| ||
Sbjct 2847243 GCCAGTGTCCGGCCATCCCCGAGTTGCTTCCCTGCAAAAATCAACCGCTGCTGGTCTGGG 2847184
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| ||||| ||| | | |||| ||||| | | ||
Sbjct 2847183 GGAATGCCCTCCTTGTCCTGTATCTTCGCTTTGACATTATCAATCGTGTCCGAGCTCTCA 2847124
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|| |||| ||| | || ||||| |||||||| || ||||||| ||||||| ||
Sbjct 2847123 ACTTCCAAGGTGATAGTCTTGCCAGTCAGAGTCTTCACAAAAACCTGCATGCCT 2847070
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229
|| ||| || || | || || || || || ||||||||||| || ||| | | |||
Sbjct 2847058 CAGAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCCAAAGTCCTACCATC 2846999
Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289
||| || ||||| ||||| | || || | ||| || ||||| ||||||||||| |||||
Sbjct 2846998 TTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTC 2846939
Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349
||| ||| ||| | | || | |||||| | | || || |||| || | ||
Sbjct 2846938 CTGAATTTTTGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCAACTTCCAAAGTGATTGT 2846879
Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||| || || || || || |||||||| |||||
Sbjct 2846878 TTTCCCAGTAAGGGTCTTCACAAAAATTTGCAT 2846846
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229
|| ||| || || | || || ||||| || ||||||||||| || ||| | | |||
Sbjct 2841070 CAGAACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCCGCCAAAGTCCTACCATC 2841011
Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289
||| || ||||| || || | || || | ||| || ||||| ||||||||||| |||||
Sbjct 2841010 TTCTAGCTGTTTCCCGGCAAAAATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTC 2840951
Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349
||| || ||| | | || | |||||| | | || || |||| || | ||
Sbjct 2840950 CTGAATTTTCGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCAACTTCCAAAGTGATTGT 2840891
Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||| || || || || || |||||||| |||||
Sbjct 2840890 TTTCCCAGTAAGGGTCTTCACAAAAATTTGCAT 2840858
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232
||| || |||| || ||||| || || ||||||||||| || ||| || ||| ||
Sbjct 2869439 AACCAAGTGTAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAAAGTGCGCCCATCCTC 2869380
Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292
|| || || ||||| ||||||| | || ||||| ||||| || || || |||||
Sbjct 2869379 GAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCAGGAGGGATTCCCTCCTTGTCTTG 2869320
Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352
|||||| |||| | || | ||||| | || || || | ||| | || ||
Sbjct 2869319 AATCTTGGCCTTTACATTGTCGATTGTGTCTGAACTCTCAACCTCAAGGGTGATGGTCTT 2869260
Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||| || |||||||| ||||| ||||||||
Sbjct 2869259 GCCAGTAAGAGTTTTCACAAAGATCTGCAT 2869230
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229
|| ||| || || | || || ||||| || ||||| ||||| || ||| | | |||
Sbjct 2870126 CAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTATAATCTGCCAGAGTCCTACCATC 2870067
Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289
||| || ||||| ||||| | || || | ||| || ||||| |||||||||||||||||
Sbjct 2870066 TTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGAATGCCTTCTTTGTC 2870007
Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349
||| ||| ||| | | || | ||||| | | || || |||| || | ||
Sbjct 2870006 CTGAATTTTTGCTTTGACATTGTCGATAGTGTCAGAGCTCTCAACTTCCAAAGTGATTGT 2869947
Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||| || || || || || ||||| || |||||
Sbjct 2869946 TTTCCCAGTAAGGGTCTTGACAAAGATTTGCAT 2869914
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
|| || |||| || ||||| || || ||||||||||| || ||| || ||| ||
Sbjct 2840154 ACCAAGTGTAGGGTTGATTCCTTCTGGATGTTGTAATCAGCCAAAGTGCGCCCATCCTCG 2840095
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293
|| || |||||||| ||||||| | || ||||| |||| || || || ||||| |
Sbjct 2840094 AGCTGCTTACCAGCAAAGATGAGCCTTTGCTGGTCAGGAGTGATTCCCTCCTTGTCTTGA 2840035
Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353
||||| |||| | || | ||||| | || || || | ||| | || |||
Sbjct 2840034 ATCTTGGCCTTTACATTGTCGATTGTGTCTGAACTCTCAACCTCAAGGGTGATGGTCTTG 2839975
Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || |||||||| ||||| || |||||
Sbjct 2839974 CCAGTAAGAGTTTTCACAAAGATTTGCAT 2839946
Score = 82.4 bits (90), Expect = 6e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
|| ||||| ||||| |||||||| || ||| | || || ||| || ||||| || ||
Sbjct 2869882 GTGGATTCCTTTTGGATGTTGTAGTCCGCTAGT-GTCCGGCCATCCTCGAGTTGCTTTCC 2869824
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
||| | || | ||||| ||||| || ||||| ||||||||||| || || ||
Sbjct 2869823 AGCAAAAATCAACCGCTGCTGGTCTGGGGGAATCCCTTCTTTGTCCTGGATTTTGGCCTT 2869764
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | |||| ||| |||| || || || | || | || |||||||| |||||
Sbjct 2869763 CACATTGTCAATGGTATCGGAACTCTCCACCTCAAGAGTAATGGTCTTGCCGGTGAGAGT 2869704
Query 114365 TTTTACAAAAATCTGCATG 114383
|| ||||| |||||||||
Sbjct 2869703 CTTCACAAAGATCTGCATG 2869685
>seq116
Length=10441785
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244
||| || || || || |||||||| ||| | ||||| || || || || || ||
Sbjct 4726258 CGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTCCC 4726199
Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304
||| ||||||| ||||| ||||||||||| |||||||| ||||| ||||| ||
Sbjct 4726198 GGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGTATCTTGGCCTT 4726139
Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | || | |||||||| | ||||| || | || || || ||||||||||| ||
Sbjct 4726138 GACGTTGTCGATGGTGTCGGAGCTCTCGACCTCGAGCGTGACGGTCTTGCCGGTCAGGGT 4726079
Query 114365 TTTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 4726078 CTTGACGAAGATCTGCAT 4726061
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || |||| || | || | ||| || || || || ||||||||||||
Sbjct 4711841 ATACCTCCGCGGAGCCTCAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAATCG 4711900
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | || || || || || || ||| |||| |||||||| || |||||
Sbjct 4711901 GCGAGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGC 4711960
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| || | | || | ||||| | | |||
Sbjct 4711961 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATCGTGTCCGAGCTCTCG 4712020
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|| || | || | |||||||||||||| || || || || ||||||||| ||
Sbjct 4712021 ACCTCGAGCGTGATGGTTTTGCCGGTCAGGGTCTTGACGAAGATCTGCATGCCT 4712074
>seq22
Length=3960921
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | ||||| || || || |||||||| |||
Sbjct 262880 ATACCTCCACGAAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCG 262939
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| || || || || || |||||| ||||||||||||| |||||||||
Sbjct 262940 GCGAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 262999
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| ||||| || | | |||| ||||| | | |||
Sbjct 263000 GGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGCTCTCG 263059
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || |||||||||| || || || || ||||||||
Sbjct 263060 ACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 263109
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || ||||||||||| || || || || || || || || ||
Sbjct 262457 GTCGACTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 262516
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| || | ||| ||||| || || |||||||| ||||| ||||| ||
Sbjct 262517 GCGAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTG 262576
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||||| | ||||| |||| ||| | || |||||||| || ||
Sbjct 262577 ACATTGTCGATGGTGTCGGAGCTCTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTC 262636
Query 114366 TTTACAAAAATCTGCATGGCT 114386
|| ||||| ||||||||| ||
Sbjct 262637 TTGACAAAGATCTGCATGCCT 262657
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || || || || || ||||| || |||
Sbjct 263108 ATACCTCCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTATAGTCG 263167
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| || || || || || || ||| |||| |||||||| |||||||||
Sbjct 263168 GCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGA 263227
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || ||||| ||||| || | | || | |||||||| | ||
Sbjct 263228 GGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCC 263287
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|| || | ||| | || |||||||| || || || || || ||||||||| ||
Sbjct 263288 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCT 263341
>seq652
Length=2384379
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || | ||||| || || || ||||| |||||||||||
Sbjct 465515 ATTCCACCACGGAGGCGAAGCACAAGATGTAGAGTTGACTCCTTTTGGATGTTGTAATCC 465456
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || || || || ||||| | || | | ||| || || ||
Sbjct 465455 GCCAGTGTCCGGCCATCCTCGAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGATCTGGG 465396
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||||| ||| | | |||||||| || | | |||
Sbjct 465395 GGAATGCCTTCCTTGTCCTGTATCTTAGCTTTGACATTATCAACGGTATCCGAGCTCTCG 465336
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| |||| || | || || ||||| || || || ||||| |||||||||
Sbjct 465335 ACTTCCAAAGTTATGGTCTTCCCGGTAAGGGTCTTGACAAATATCTGCATG 465285
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || ||||| ||||| || ||| | | ||| ||||||||||| ||
Sbjct 465254 GTGGACTCCTTCTGGATGTTATAATCCGCCAAAGTCCTACCATCCTCAAGTTGTTTCCCG 465195
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| || | || || || || ||||||||||| ||||| ||| || |||
Sbjct 465194 GCAAAGATAAGCCTTTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGAATTTTCGCTTTG 465135
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| | | || || |||| ||| | ||| || || || || ||
Sbjct 465134 ACATTGTCAATGGTGTCAGAGCTCTCAACTTCCAAGGTGATCGTCTTCCCAGTTAGGGTC 465075
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| || |||||
Sbjct 465074 TTGACAAAGATTTGCAT 465058
>seq569
Length=4400913
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| ||| | || || || || || || || ||
Sbjct 2054731 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 2054790
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| ||||||| ||||| ||||||||||| ||||| ||||| || ||||| ||
Sbjct 2054791 GCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCTTTATCCTGGATCTTGGCCTTG 2054850
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||||| ||| || || || | ||| | || || || || || |||
Sbjct 2054851 ACGTTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTT 2054910
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 2054911 TTCACGAAGATCTGCAT 2054927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419948140766112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |