Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq569 129 6e-25
seq116 122 9e-23
seq87 122 9e-23
seq49 122 9e-23
seq203 111 2e-19
seq22 109 6e-19
seq652 100 3e-16
>seq569
Length=4400913
Score = 129 bits (142), Expect = 6e-25
Identities = 154/205 (75%), Gaps = 3/205 (1%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || || || || || |||| || |||||||| || |||||
Sbjct 2057987 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2058046
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||||| || | || |||||||||| ||| || |||| |||
Sbjct 2058047 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2058105
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | |||||| || ||||| |||| |||||||| || |||||||| || || |
Sbjct 2058106 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 2058165
Query 42196 CAAAGATTTGCATTTTC-ACGCCGA 42219
| ||||| ||||| ||| ||||||
Sbjct 2058166 CGAAGATCTGCATCTTCGCCGCCGA 2058190
Score = 113 bits (124), Expect = 5e-20
Identities = 146/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || || || || || |||| || |||||||| || |||||
Sbjct 2054736 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 2054795
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||| | || | || ||| || ||| ||| || |||| |||
Sbjct 2054796 GATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCTTTATCCTGGATCTTGGCCTTGA-CGT 2054854
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | |||||| || ||||| || | |||||||| || |||||||| || || |
Sbjct 2054855 TGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCCGTTAGGGTTTTCA 2054914
Query 42196 CAAAGATTTGCATTTTCAC 42214
| ||||| ||||| |||||
Sbjct 2054915 CGAAGATCTGCATCTTCAC 2054933
>seq116
Length=10441785
Score = 122 bits (134), Expect = 9e-23
Identities = 147/196 (75%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || ||||||||||| || || |||| |||| || |||||||| ||||||||
Sbjct 4726480 CTCCTTCTGGATATTGTAATCGGCGAGGGTCCTACCGTCCTCGAGCTGCTTTCCAGCGAA 4726421
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || |||||||| || | || | || |||||||||| |||||| |||| |||
Sbjct 4726420 GATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTGA-CGT 4726362
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | |||||| |||| || || |||| ||||||||| || || || || ||||
Sbjct 4726361 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGCGTGATGGTCTTCCCGGTCAGGGTCT 4726305
Query 42193 TTACAAAGATTTGCAT 42208
| || ||||| |||||
Sbjct 4726304 TGACGAAGATCTGCAT 4726289
Score = 114 bits (126), Expect = 1e-20
Identities = 143/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || |||||||| || || |||| |||| || |||||||| || |||||
Sbjct 4711879 CTCCTTCTGGATGTTGTAATCGGCGAGGGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 4711938
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || |||||||| || | || | || |||||||||| ||| || |||| |
Sbjct 4711939 GATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 4711998
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | |||||| |||| || || |||| ||||||||||||||| || || |||||
Sbjct 4711999 ATCGATCGTGTCCGAGCTC---TCGACCTCGAGCGTGATGGTTTTGCCGGTCAGGGTCTT 4712055
Query 42194 TACAAAGATTTGCAT 42208
|| ||||| |||||
Sbjct 4712056 GACGAAGATCTGCAT 4712070
Score = 104 bits (114), Expect = 3e-17
Identities = 146/201 (73%), Gaps = 8/201 (4%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || || || || || |||| || |||||||| || |||||
Sbjct 4726252 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTCCCGGCGAA 4726193
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||| | || | || ||||||||| || || |||| |||
Sbjct 4726192 GATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGTATCTTGGCCTTGA-CGT 4726134
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||||| |||| || || |||| ||||| ||| ||||| || || ||||
Sbjct 4726133 TGTCGATGGTGTCGGAGCTC---TCGACCTCGAGCGTGACGGTCTTGCCGGTCAGGGTCT 4726077
Query 42193 TTACAAAGATTTGCATTTTCA 42213
| || ||||| ||||| ||||
Sbjct 4726076 TGACGAAGATCTGCATCTTCA 4726056
Score = 96.9 bits (106), Expect = 4e-15
Identities = 139/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || ||||||||||| || || || || |||| || |||||||| || |||||
Sbjct 4711651 CTCCTTCTGGATATTGTAATCGGCGAGGGTGCGACCGTCCTCCAGCTGCTTCCCGGCGAA 4711710
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| |||||||| || | || | | |||||||||| || || || | |
Sbjct 4711711 GATGAGCCGCTGCTGATCCGGCGGGATCCCCTCCTTGTCCTGTATCTTCGCCTTCACATT 4711770
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | |||||| |||| ||||| || | |||||| || || || || || |||||
Sbjct 4711771 GTCGATCGTGTCCGAGCTC---TCCACCTCCAGCGTGATCGTCTTCCCGGTCAGGGTCTT 4711827
Query 42194 TACAAAGATTTGCAT 42208
|| ||||| |||||
Sbjct 4711828 CACGAAGATCTGCAT 4711842
>seq87
Length=12262769
Score = 122 bits (134), Expect = 9e-23
Identities = 144/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || || || ||||| |||| || |||||||| || |||||
Sbjct 7257239 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 7257298
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||| | || | || |||||||||| ||| || || | |
Sbjct 7257299 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 7257358
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | ||||||||||| || || |||| || ||||| || |||||||| || || ||
Sbjct 7257359 GTCGATGGTGTCGCTCGACTCGACCTCGAGGGTTATGGTCTTCCCCGTTAGGGTTTTCAC 7257418
Query 42197 AAAGATTTGCATTTT 42211
||||| ||||| ||
Sbjct 7257419 GAAGATCTGCATCTT 7257433
>seq49
Length=4798478
Score = 122 bits (134), Expect = 9e-23
Identities = 168/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| ||||| | ||| | ||||||||| | ||| |||||||| || ||||||||||||
Sbjct 2846206 CCACCTCTCAGACGAAGCACCAAATGAAGGGTGGATTCCTTTTGGATGTTGTAATCAGCC 2846147
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || ||| | || || |||||||| ||||| || ||||| | ||||||||| | ||
Sbjct 2846146 AGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 2846087
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157
| | ||| |||| | ||| | || | |||| | | | |||||| ||| |||
Sbjct 2846086 ATTCCCTCTTTGT-CTTGAATCTTGGCCTTGACATTATCAATCGTGTCCGAGCT---TTC 2846031
Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||| || ||||| ||||| || || ||||| |||||||| |||||
Sbjct 2846030 AACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2845980
Score = 116 bits (128), Expect = 4e-21
Identities = 145/195 (74%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|||||||| || |||||||||||||| || ||| | || || |||||||| ||||| ||
Sbjct 2840364 TCCTTTTGGATGTTGTAATCAGCCAGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAG 2840305
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
||||| | ||||||||| | || | | |||||||| | ||| | || | |||| |
Sbjct 2840304 ATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCCTTGT-CTTGAATCTTGGCCTTGACATT 2840246
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| |||||||| ||| ||| || |||| || ||||| ||||| || || |||||
Sbjct 2840245 ATCAACCGTGTCCGAGCT---TTCAACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTT 2840189
Query 42194 TACAAAGATTTGCAT 42208
|||||||| |||||
Sbjct 2840188 CACAAAGATCTGCAT 2840174
Score = 107 bits (118), Expect = 2e-18
Identities = 143/195 (73%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || |||||||||||||| || ||| | || || |||||||| ||||| ||
Sbjct 2869648 TCCTTCTGGATGTTGTAATCAGCCAGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCAAAG 2869589
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
||||| | ||||||||| | || | | |||||||| | ||| | || | |||| |
Sbjct 2869588 ATGAGCCTCTGCTGGTCAGGAGGGATTCCCTCCTTGT-CTTGAATCTTGGCCTTGACATT 2869530
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| |||||||| ||| ||| || || | || ||||| ||||| || || |||||
Sbjct 2869529 ATCAACCGTGTCCGAGCT---TTCAACCTCAAGGGTAATGGTCTTGCCGGTGAGGGTCTT 2869473
Query 42194 TACAAAGATTTGCAT 42208
|||||||| |||||
Sbjct 2869472 CACAAAGATCTGCAT 2869458
Score = 105 bits (116), Expect = 7e-18
Identities = 165/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || | ||||| ||||| || | || ||| || || || || ||||| |||
Sbjct 2870140 CCTCCCCTCAGACGCAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTATAATCTGCC 2870081
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||||| | || |||||||| || ||||| || || || | |||||| || | ||
Sbjct 2870080 AGAGTCCTACCATCTTCTAGCTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCCGGGGGA 2870021
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157
| || || |||||| ||| |||||| ||||| | | | ||||| |||| ||
Sbjct 2870020 ATGCCTTCTTTGTCC-TGAATTTTTGCTTTGACATTGTCGATAGTGTCAGAGCTC---TC 2869965
Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || | ||||| ||||| || || || ||||| |||||||||||||||
Sbjct 2869964 AACTTCCAAAGTGATTGTTTTCCCAGTAAGGGTCTTGACAAAGATTTGCATT 2869913
Score = 104 bits (114), Expect = 3e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| ||||| | ||| | ||||||||| | ||| ||||| || || || |||||||||
Sbjct 2840628 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGATTCCTTCTGGATGTTATAATCAGCC 2840569
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || | || || |||||||| || || || ||||| | ||||||||| | ||
Sbjct 2840568 AGGGTGCGACCATCCTCGAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 2840509
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157
| | |||||| | | ||| | || | |||| | | | |||||| ||| |||
Sbjct 2840508 ATTCCCTCCTTAT-CTTGAATCTTGGCCTTGACATTATCAATCGTGTCAGAGCT---TTC 2840453
Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||| || ||||| ||||| || || ||||| |||||||| |||||
Sbjct 2840452 AACCTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2840402
Score = 100 bits (110), Expect = 3e-16
Identities = 140/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
||||||||||||||||||||| ||||| ||||| | || || ||||| || || || ||
Sbjct 2841277 CTCCTTTTGAATATTGTAATCGGCCAGTGTCCGGCCATCCTCGAGCTGTTTCCCTGCAAA 2841218
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | ||||||||||| | || | || ||||||||| || || ||||| |
Sbjct 2841217 AATCAACCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGTATCTTCGCTTTGACATT 2841158
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | |||||| |||| || || || | ||||| || ||||| || || |||||
Sbjct 2841157 ATCAATCGTGTCCGAGCTC---TCGACTTCCAAAGTGATAGTCTTGCCAGTCAGAGTCTT 2841101
Query 42194 TACAAAGATTTGCAT 42208
||||| || |||||
Sbjct 2841100 CACAAAAATCTGCAT 2841086
Score = 96.9 bits (106), Expect = 4e-15
Identities = 139/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||||||||| ||||| || ||||| ||||| | || || || ||||| || |||||
Sbjct 2870333 CTCCTTTTGAATGTTGTAGTCGGCCAGTGTCCGGCCATCCTCAAGTTGCTTCCCTGCGAA 2870274
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||| | ||||||||||| | || | || ||||| ||| || || |||| |
Sbjct 2870273 TATCAACCGCTGCTGGTCCGGGGGAATGCCTTCCTTATCCTGTATCTTCGACTTGACATT 2870214
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | |||||| |||| ||||| || | ||||| || ||||| || || |||||
Sbjct 2870213 ATCGATCGTGTCAGAGCTC---TCCACTTCCAAGGTGATAGTCTTGCCGGTAAGGGTCTT 2870157
Query 42194 TACAAAGATTTGCAT 42208
||||| || |||||
Sbjct 2870156 CACAAAAATCTGCAT 2870142
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| ||||| | ||| | ||||||||| | ||| |||| || || || |||||||||
Sbjct 2846617 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGATCCCTTCTGGATGTTATAATCAGCC 2846558
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || | || || |||||||| | || || ||||| | ||||||||| | ||
Sbjct 2846557 AGGGTGCGACCATCCTCGAGCTGCTTGCTTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 2846498
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | |||||| | | ||| | || | || | | | | ||||||| ||| ||
Sbjct 2846497 ATTCCCTCCTTAT-CTTGAATCTTGGCCTTAACATTATCGATCGTGTCGGAGCTTTCAAC 2846439
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| || ||||| ||||| || || ||||| |||||||| |||||
Sbjct 2846438 CTCGAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 2846391
Score = 91.5 bits (100), Expect = 2e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||||||||| |||||||| ||||| ||||| | || | || ||||| || || ||
Sbjct 2847265 CTCCTTTTGAATGTTGTAATCGGCCAGTGTCCGGCCATCCCCGAGTTGCTTCCCTGCAAA 2847206
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | ||||||||||| | || | || |||||||||| || || ||||| |
Sbjct 2847205 AATCAACCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGTATCTTCGCTTTGACATT 2847146
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | |||||| |||| || || || | ||||| || ||||| || || |||||
Sbjct 2847145 ATCAATCGTGTCCGAGCTC---TCAACTTCCAAGGTGATAGTCTTGCCAGTCAGAGTCTT 2847089
Query 42194 TACAAAGATTTGCAT 42208
||||| | |||||
Sbjct 2847088 CACAAAAACCTGCAT 2847074
>seq203
Length=8626763
Score = 111 bits (122), Expect = 2e-19
Identities = 143/196 (73%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| ||||| ||||| || |||| | | || || ||||||||||| |||||
Sbjct 5731033 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTCCCATCCTCCAGCTGCTTACCGGCGAA 5730974
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| |||| ||| ||||| | ||| | | ||||||||| ||| ||| || | |
Sbjct 5730973 GATCAGTCTCTGTTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTTTGCCTTAACATT 5730914
Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193
| | |||||| |||| || || || | ||||||||||| ||||| || |||||
Sbjct 5730913 ATCAATCGTGTCCGAGCTC---TCGACCTCCAAGGTGATGGTTTTTCCCGTCAGGGTCTT 5730857
Query 42194 TACAAAGATTTGCATT 42209
||||| || ||||||
Sbjct 5730856 GACAAAAATCTGCATT 5730841
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || | ||| | |||||| || | || |||||| ||||| || ||||| |||
Sbjct 5730156 CCTCCCCTGAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCC 5730097
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
| || || | || || |||||||| ||||| || || || | ||||||||| | ||
Sbjct 5730096 AAGGTTCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 5730037
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | |||||||| ||| |||||| ||| | | | | |||||| ||||||
Sbjct 5730036 ATCCCTTCCTTGTCT-TGAATTTTTGCTTTTACATTATCGATTGTGTCGGAGCTTTCCAC 5729978
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||| || |||||||| || || || ||||||||||||||
Sbjct 5729977 CTCAAGGGTGATTGTCTTGCCCGTAAGGGTTTTCACAAAGATTTGCAT 5729930
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/221 (69%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 41991 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 42050
||||| | |||||| || | |||| || || || || ||||| || || || ||||
Sbjct 5730375 AAACGGAGCACCAAGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCCGCAAGCGTCCTG 5730316
Query 42051 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCC 42110
| || || |||||||| || || || ||||| | ||||||||| | ||| | | ||||
Sbjct 5730315 CCATCTTCAAGCTGCTTTCCTGCAAAAATGAGCCTCTGCTGGTCCGGTGGAATACCCTCC 5730256
Query 42111 TTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACC 42167
||||| ||| || |||| | | | ||||| |||| || || || |
Sbjct 5730255 TTGTCTTGGATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTC---TCAACTTCTAGG 5730199
Query 42168 GTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || || || || || ||||| ||||||||||||||
Sbjct 5730198 GTAATTGTCTTCCCAGTGAGGGTCTTCACAAAGATTTGCAT 5730158
>seq22
Length=3960921
Score = 109 bits (120), Expect = 6e-19
Identities = 144/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || || || || || |||| || |||||||| ||||||||
Sbjct 262918 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAA 262977
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||| | || | | |||||||||| ||| || |||| |||
Sbjct 262978 GATGAGACGCTGCTGGTCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 263036
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | |||||| |||| || || |||| |||||||| ||||| || | ||||
Sbjct 263037 TGTCAATCGTGTCCGAGCTC---TCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCT 263093
Query 42193 TTACAAAGATTTGCAT 42208
| || ||||| |||||
Sbjct 263094 TGACGAAGATCTGCAT 263109
Score = 104 bits (114), Expect = 3e-17
Identities = 143/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || || || || ||| |||| || |||||||| || |||||
Sbjct 263374 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTTCGCCCGTCCTCCAGCTGCTTCCCGGCGAA 263433
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | || | | |||||||||| ||| || |||| |||
Sbjct 263434 GATCAGACGCTGCTGGTCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 263492
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||||| |||| ||||| |||| |||||||| || || || || ||||
Sbjct 263493 TGTCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCT 263549
Query 42193 TTACAAAGATTTGCAT 42208
| || ||||| |||||
Sbjct 263550 TGACGAAGATCTGCAT 263565
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/196 (72%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || || || || || || || || |||| || |||||||| || |||||
Sbjct 263146 CTCCTTCTGGATGTTATAGTCGGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 263205
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | || | | |||||||||| ||| || || | |||
Sbjct 263206 GATCAGACGCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 263264
Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | ||||| |||| ||||| |||| |||||||| ||||| || || ||||
Sbjct 263265 TGTCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCT 263321
Query 42193 TTACAAAGATTTGCAT 42208
| || ||||| |||||
Sbjct 263322 TGACGAAGATCTGCAT 263337
>seq652
Length=2384379
Score = 100 bits (110), Expect = 3e-16
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| || | ||| | |||||| || | ||| ||||||||||| ||||| || ||
Sbjct 465056 CCTCCCCTCAGACGGAGCACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCTGCG 464997
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| |||| | || || || ||||| ||||| || || | | ||||||||| | ||
Sbjct 464996 AGCGTCCTGCCATCCTCGAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGGG 464937
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA---TTCC 42158
| | |||||||||| |||||| || | | | | ||||| ||| |||
Sbjct 464936 ATTCCCTCCTTGTCCTGGATTTTCGCCTTCACGTTATCGATAGTGTC---CGAACTTTCG 464880
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||| || ||||| ||||| || || ||||| ||||||||||||||
Sbjct 464879 ACCTCGAGGGTTATGGTCTTGCCAGTGAGGGTCTTCACAAAGATTTGCAT 464830
Score = 93.3 bits (102), Expect = 5e-14
Identities = 162/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| || || || |||| |||||| || | ||| |||||| || || || ||||| |||
Sbjct 465284 CCCCCCCTCAATCGCAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAATCCGCC 465225
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
| ||||| | || || || || || || || || || || | ||||| || | ||
Sbjct 465224 AAAGTCCTACCATCCTCAAGTTGTTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGA 465165
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157
| || ||||||||| ||| |||| | ||||| | | | ||||| |||| ||
Sbjct 465164 ATGCCTTCCTTGTCC-TGAATTTTCGCTTTGACATTGTCAATGGTGTCAGAGCTC---TC 465109
Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || | ||||| || || || ||||| ||||| |||||||||||||||
Sbjct 465108 AACTTCCAAGGTGATCGTCTTCCCAGTTAGGGTCTTGACAAAGATTTGCATT 465057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542965801139840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |