Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq444 673 0.0
seq10427 569 3e-157
seq32303 437 1e-117
seq31551 315 9e-81
seq31730 262 5e-65
seq31523 183 4e-41
seq34854 178 2e-39
seq328 168 8e-37
seq111 158 2e-33
seq203 154 2e-32
seq155 154 2e-32
seq77 149 8e-31
seq85 140 4e-28
seq31544 122 1e-22
seq134 100 4e-16
seq151 89.7 6e-13
seq7573 86.0 8e-12
>seq444
Length=4271
Score = 673 bits (746), Expect = 0.0
Identities = 745/993 (75%), Gaps = 0/993 (0%)
Strand=Plus/Plus
Query 7528 CTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCAT 7587
|||| ||||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||
Sbjct 122 CTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCAT 181
Query 7588 GCCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATC 7647
||||| ||||||||| | | || ||||| || || | ||||| ||||||| |||
Sbjct 182 ACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTGACTATC 241
Query 7648 AATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAG 7707
|| | || |||||||| |||||||| || |||||||| ||||| || |||| ||| |
Sbjct 242 AACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAA 301
Query 7708 AGCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGA 7767
|||||| ||||| || || || || ||||| || || | |||||| || | ||||| ||
Sbjct 302 AGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGA 361
Query 7768 GTTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGAT 7827
|||||||| ||| |||||||| |||| || ||||| || ||||||||||| || ||
Sbjct 362 ATTGTTGAAACTAGCATATTGGAAAATCAATCGGCCAAAATAACCGTGAGCAGCTACAAT 421
Query 7828 GTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGT 7887
|||||| || ||||||||||| ||||| | ||||| | || || ||| || ||
Sbjct 422 GTTGTAAGTTTCTTCTTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGT 481
Query 7888 GGTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACC 7947
|||||| | | || | ||| ||||| | ||||||||||| ||||| || || || ||
Sbjct 482 GGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAAAAGGGAGCC 541
Query 7948 ACCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGC 8007
|| || |||||||| || || | |||||| || |||||||| || ||||||||||| ||
Sbjct 542 GCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGC 601
Query 8008 TTGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAA 8067
||||| |||| ||| ||||||| ||||||||||| || ||||||||| | ||||| ||
Sbjct 602 CTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAA 661
Query 8068 AGAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGA 8127
| || ||||| | ||||||| | ||| ||||||| || || ||||| ||||| ||
Sbjct 662 ACTTCCCTGACCAATTGGATAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGA 721
Query 8128 GTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACC 8187
||||| ||| ||||| ||||||||||| |||||| || ||||||||||||||||||
Sbjct 722 ATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 781
Query 8188 CATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTT 8247
||| || | | ||| | | ||||| | | || |||| ||||||| |||||
Sbjct 782 CATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTT 841
Query 8248 GTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGC 8307
||| ||||| ||||||| || || ||||||||||| || || || || | ||||||||
Sbjct 842 GTATAGCCATTCATCAACGGATGCAGCTTCCCAGATTGGGTAAAAATGCAATCCAATAGC 901
Query 8308 GTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGC 8367
||||| ||||| || ||||| || || || ||||| || || | || || ||||
Sbjct 902 TGCAGAAGTAGGAATAATGGCACCGGAAATAATATTGTTTCCGTAAAGAAGAGATCCAGA 961
Query 8368 GACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA 8427
|| |||||||| || || ||||| || || ||||||||||| | ||| |||| || ||
Sbjct 962 AACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGATAATAAA 1021
Query 8428 ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAG 8487
| | || || | | | ||||| ||||||| ||||| ||||| || | || ||
Sbjct 1022 AACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 1081
Query 8488 ACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520
||| || | ||| |||| ||||||||||||
Sbjct 1082 ACGGTTTTCAGTGCTAGTTATCCAGTTACAGAA 1114
>seq10427
Length=4047
Score = 569 bits (630), Expect = 3e-157
Identities = 736/1014 (73%), Gaps = 2/1014 (0%)
Strand=Plus/Minus
Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322
|||||||| || | ||| | || || ||||| |||| || ||||||||| || |||||
Sbjct 1788 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 1729
Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382
| |||||||| ||||| | |||||| || || || || || || |||||||| |||
Sbjct 1728 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAAAGTC 1669
Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442
|| || |||||||| |||||||| | ||| || || ||||| |||||||| || | |||
Sbjct 1668 TCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 1609
Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502
|| | || | ||| | | |||| | |||| | ||| | || || |||||
Sbjct 1608 TTCAAAGCTAAACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 1549
Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562
| |||||||||||||| |||||| |||||| || || | |||||||| || |||||
Sbjct 1548 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGACCAA 1489
Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622
|| || ||||| |||||||| ||||| || || || |||| || || | ||| || |
Sbjct 1488 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGG 1429
Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682
|| ||||||| |||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct 1428 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATA 1369
Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742
|| || |||| || | || | | ||| || || |||||||||||||| ||||| |
Sbjct 1368 GCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGTTCAAT 1309
Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802
||||| || || || || || | ||||| | ||| || ||||| || || ||||||||
Sbjct 1308 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 1249
Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862
|||||||||||||||| || || || || ||||| || || |||||||| |||||
Sbjct 1248 CTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAACAAAA 1189
Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921
||||||||||||||||| || ||||||||||| || || || | | || ||| || ||
Sbjct 1188 ACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGATCGAGC 1130
Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981
| ||||| || || | ||| |||||||| | || || || |||||||| || |||||
Sbjct 1129 AAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCAACAAA 1070
Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041
|| |||||| || || | ||| ||| || |||||||| || ||||| ||||||||
Sbjct 1069 AGCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCA 1010
Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101
|| | | | ||||| | | | | ||||||||| || || ||||| || | ||
Sbjct 1009 CAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTTAAAAA 950
Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161
||| || || || | ||| ||| || | || ||||| ||||| || || || ||
Sbjct 949 ATTGCAACCTTCTAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACAAAGGT 890
Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221
||| || |||| |||||| || | || | || ||| ||| || || | ||||| ||
Sbjct 889 TGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGACCAGA 830
Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275
|||||| ||||||||||| | || | | | ||||||||| | | ||||||
Sbjct 829 CCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 776
>seq32303
Length=834
Score = 437 bits (484), Expect = 1e-117
Identities = 540/733 (74%), Gaps = 4/733 (1%)
Strand=Plus/Plus
Query 6545 CCAAAGATCTGAGACCAGAAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGT 6604
|||||||| || ||||| || |||||||| |||||||| ||||| || || || ||||
Sbjct 6 CCAAAGATTTGGGACCAAAAGCGATTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGA 65
Query 6605 GTAGGCTCAAACGCCTTGAAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCT 6664
|| || | ||| || ||| ||||||| |||||||||||||| |||||||| |||
Sbjct 66 GTTGGGTTAAAAGCACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCT 125
Query 6665 ACAGTAGCACCGTGAATAGCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATC 6724
|| |||||||| |||||||| || || | || | || || | ||| || || ||||||
Sbjct 126 ACGGTAGCACCATGAATAGCGCATAGGAGAGCAGCGCCCAATACACCGGCAACTCCCATC 185
Query 6725 ATATGAAACGGGTTGAGCGTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAAT 6784
|||||||| ||||| | ||||| || || || || || | || || | |||||| |||
Sbjct 186 ATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAAAGGATGAAGCGAAAT 245
Query 6785 ATCGCTGCAACACCAAACGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATG 6844
|| ||||| |||||||| |||||||||||||||| ||||| || || ||||| ||
Sbjct 246 ATAGCTGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGGATAAATC 305
Query 6845 AGAAAGACAGACACAAAGACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGA 6904
|| || ||||| ||||| |||||||| ||||||||||| ||||||||||| || || ||
Sbjct 306 AGGAATACAGAAACAAAAACAGCAATTGGACCAGAAAATGCGATTGCATTATAAGGTCGC 365
Query 6905 ATACCGACTAGA-CGTGCGATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGC 6963
| | || ||| || || | ||||| || || | |||||||||||| || | || ||
Sbjct 366 A-ATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCCGAAAGC 424
Query 6964 TCCGTGGAGCGCCACAAAAGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCC 7023
|||||||| |||||||||| ||| || || || | |||| ||| || ||||||||
Sbjct 425 GCCGTGGAGAGCCACAAAAGTCCACAGACCACCTAATTGGCACCAACGAGTAAAATCTCC 484
Query 7024 CTGAGCTTCTGGACCCCATAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGA 7083
|| ||||| ||||||||||| | | | |||||| | | | | ||||||||| ||
Sbjct 485 TTGTGCTTCAGGACCCCATAGTAACAACAAAGAATGTGCTAAACTATTAGCAGGAGTAGA 544
Query 7084 TACAGCAGCAGTAAGGAAATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTA 7143
|| || ||||| | ||| || ||||| || | ||| ||| || | || || || ||
Sbjct 545 AACTGCGGCAGTTAAGAAGTTGCATCCTTCCAAATAGGAACTGGCCAATCCATGGGTATA 604
Query 7144 CCAGCTCGTGACGAAAGTTGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGG 7203
||| || || || ||||| || |||| |||||| || | || | || ||| |||
Sbjct 605 CCATGAAGTTACAAAGGTTGTACCTGTGAACCAACCACCTAAGGCGAAATAGGCACAAGG 664
Query 7204 GAACAGAAGAAGACCTGACCAACCAACAAAAACGAACCTATCAC-GCTTAAGCCAGTCAT 7262
|| || | ||||| |||||||| ||||||||||| | || | | ||| ||||||||
Sbjct 665 AAAGAGCAATAGACCGGACCAACCTACAAAAACGAAACGGTCTCTACGTAA-CCAGTCAT 723
Query 7263 CGAGTACATCAAA 7275
| | | ||||||
Sbjct 724 CCATAATATCAAA 736
>seq31551
Length=1713
Score = 315 bits (348), Expect = 9e-81
Identities = 333/438 (76%), Gaps = 7/438 (2%)
Strand=Plus/Plus
Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588
||| ||||||| ||||| || |||||||| ||||||||||| || ||||| ||||||||
Sbjct 719 TCAACAGCAGCTAGGTCTAGGGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 778
Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTT------GA 7642
||||| ||||||||| | | || |||||||| || | ||| |||||| ||
Sbjct 779 CCAAGGTTAGCACGGTTAATGAGATCAGCCCAGGTATTAATTACATGACCTTTTCCTTGA 838
Query 7643 CCATCAATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACA 7702
| ||||| | || |||||||| ||||||||||| | || || ||||||||||||| |
Sbjct 839 CTATCAACTACAGATTGGTTGAAATTGAAACCGTTTAAGTGAAAAGCCATGGTGCTAATA 898
Query 7703 CCAAGAGCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAA 7762
|| | ||||||||||||||| || || || ||||| || || |||||||| || | |||
Sbjct 899 CCTAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAGGAA 958
Query 7763 CGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCA 7822
|| || ||||||| ||| ||||||||||||| || ||||| || || ||||||||
Sbjct 959 CGAGAATTGTTGACACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCT 1018
Query 7823 ACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGAC 7882
||||| || || || ||||||||||||||||| | ||||| || || |||
Sbjct 1019 ACGATATTATAAGTTTCTTCTTCTTGACCGAATCTGTAACCTACATTAGCAGATTCATTT 1078
Query 7883 TCAGTGGTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGA 7942
|| |||||||| | | || | ||||||||| | ||||||||||| |||||||| |||
Sbjct 1079 TCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGA 1138
Query 7943 GAACCACCAAAG-ACACC 7959
|| || || ||| |||||
Sbjct 1139 GAGCCGCCGAAGTACACC 1156
>seq31730
Length=297
Score = 262 bits (290), Expect = 5e-65
Identities = 229/285 (80%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 7906 AGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAAGACACCAGCGAC 7965
||||||||| | ||||||||||| |||||||| || || || || || |||||||| ||
Sbjct 285 AGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTAC 226
Query 7966 GCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAGACAAGCATGTA 8025
||| | |||||| || |||||||| |||||||||||||| || ||||| |||| |||| |
Sbjct 225 GCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAA 166
Query 8026 GTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACCTTGACCGAAAGG 8085
|||||| |||||||| || || ||||||||| | ||||| ||| |||||||| | ||
Sbjct 165 GTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAACTTCCTTGACCAATTGG 106
Query 8086 ATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCTACACAGATCCA 8145
|||| | ||| ||||||| || || ||||| ||||| || ||||| ||| |||||
Sbjct 105 GTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCA 46
Query 8146 GGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCAT 8190
|| |||||||| |||||| || |||||||||||||||||||||
Sbjct 45 AGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCAT 1
>seq31523
Length=225
Score = 183 bits (202), Expect = 4e-41
Identities = 161/201 (80%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 7663 GAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTGAACCAGAT 7722
||| |||||||| || |||||||| ||||| ||||| | ||| | |||||||||||||||
Sbjct 225 GAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGTGAACCAGAT 166
Query 7723 GCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGC 7782
|| || || ||||| || || ||||||||||| | ||||| || |||||||| |||
Sbjct 165 ACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAATTGTTGAAACTAGC 106
Query 7783 GTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTC 7842
||||||||||||| || ||||| || || |||||||| ||||| || || || |||||
Sbjct 105 ATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTTTCTTC 46
Query 7843 TTCTTGACCGAACTTATAACC 7863
||||||||||| | |||||
Sbjct 45 CTCTTGACCGAATCTGTAACC 25
>seq34854
Length=328
Score = 178 bits (196), Expect = 2e-39
Identities = 213/287 (74%), Gaps = 2/287 (1%)
Strand=Plus/Minus
Query 8235 AAGGACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGT 8294
||||||| |||||||| | ||| ||||||| ||| || |||||||| || || || || |
Sbjct 317 AAGGACCGCCGTTGTATAACCATTCATCAACAGATGCCGCTTCCCATATTGGGTAAAAAT 258
Query 8295 GGAGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACA 8354
| | ||| ||||| ||||| ||||| || ||||| ||||| || ||||| ||||| |
Sbjct 257 GCAAACCTATAGCTGCAGAAGTAGGAATAATGGCACCCGAGATAATATTGTTTCCATAAA 198
Query 8355 TGAGCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGA 8414
|| || |||| || |||||||| || || ||||| || || ||||||||||| | ||
Sbjct 197 GTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGA 138
Query 8415 AAGCGACGATGAA-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAAC 8473
| || | || || ||| | || || | | | ||||| ||||||| ||||| |||
Sbjct 137 AGGCAATAATAAATACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAAC 79
Query 8474 CAACCGACATACAGACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520
|| || | || ||||| || | |||| ||||| ||||||||||||
Sbjct 78 CATCCAATGTAAAGACGGTTTTCGGTGCTGGTTATCCAGTTACAGAA 32
>seq328
Length=921196
Score = 168 bits (186), Expect = 8e-37
Identities = 204/278 (73%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 6300 CAAAGTTTTCATGTGGTTGATCCACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATA 6359
||| ||||||||| || ||||| | |||||||| ||||| | ||||| || || |
Sbjct 671393 CAAGGTTTTCATGAGGCTGATCTTGAGCCGCCATCCAAGCACGAATACCTTTGTTTAAGA 671452
Query 6360 GGATGTTCTTGGTATAGAACGTCTCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTG 6419
| || || ||||| ||||| || || || || ||||| |||||||| | |||||| || |
Sbjct 671453 GAATATTTTTGGTGTAGAAAGTTTCAAATTCAGGATCTTCCGCTGCACGGATCTCCTGGG 671512
Query 6420 AAACAAAGTCATAAGCTCTAAGGTTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCC 6479
|||| |||||||| || | ||||| || || ||||| | | |||| | |||
Sbjct 671513 AAACGAAGTCATAGGCACGTAGGTTCAGAGCCAGACCGACTACTCCAAGAGCACTCATCC 671572
Query 6480 AAAGACCCATAACAGGAACAAACAGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGG 6539
| | ||| | || || ||||| | |||||||||||||| |||||| |||||| || |
Sbjct 671573 ATAAACCGGTTACTGGTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAG 671632
Query 6540 CGATACCAAAGATCTGAGACCAGAAACGATTAGCCGTG 6577
| | |||||||| || ||||| || |||||||| |||
Sbjct 671633 CAACCCCAAAGATTTGGGACCAAAAGCGATTAGCGGTG 671670
>seq111
Length=3019079
Score = 158 bits (174), Expect = 2e-33
Identities = 197/270 (73%), Gaps = 0/270 (0%)
Strand=Plus/Plus
Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322
|||| ||| || | || | || || ||||| |||| || ||||||||| || |||||
Sbjct 6520 AGAGGGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 6579
Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382
| |||||||| ||||| | |||||| || || || || || ||||| ||||| ||
Sbjct 6580 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAAAGTT 6639
Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442
|| || || ||||| |||||||| | |||||| || ||||| |||||||| || | |||
Sbjct 6640 TCAAATTCAGGATCTTCCGCTGCACGGATCTCCTGGGAAACGAAGTCATAGGCACGTAGG 6699
Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502
|| || || ||||| | | |||| | |||| | ||| | || || |||||
Sbjct 6700 TTCAGAGCCAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTACAAAT 6759
Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTG 6532
| |||||||||||||| |||||| ||||||
Sbjct 6760 AACATAAAGAAATGTAACCAACGTTTATTG 6789
>seq203
Length=8626763
Score = 154 bits (170), Expect = 2e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 7976 TGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAGACAAGCATGTAGTTGAACGTA 8035
|| || || | ||| |||||||||||||| |||||||| |||| |||| | ||||| | |
Sbjct 3756301 TGCAATGGATACATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAATTGAAAGCA 3756360
Query 8036 CCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACGAGG 8095
| || || || ||||||||| | ||| | || |||||||| | || |||| | |
Sbjct 3756361 CTGGAAATTCCTAGAGGCATATCATCATAAAATCTTCCTTGACCAATTGGGTAGATCAAG 3756420
Query 8096 AATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCTACACAGATCCAGGGACGCATA 8155
|| ||||||| || | ||||| ||||| || ||||| ||| ||||| || ||||||
Sbjct 3756421 AAAACAGCAGTAGCAGTTGCAACCGGAGCTGAATATGCAACAACAATCCAAGGGCGCATA 3756480
Query 8156 CCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193
||||||||| || ||||||| ||||| |||||||||
Sbjct 3756481 CCTAGACGGAAACTAAGTTCCTACTCATAACCCATGTA 3756518
Score = 82.4 bits (90), Expect = 9e-11
Identities = 123/172 (72%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 7838 TCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCACGA 7897
||||| ||||||||||| || ||||| | || ||| ||| || | ||||| | |
Sbjct 3392035 TCTTCCTCTTGACCGAATTTGTAACCTTCATTAGTGGATTCATTTTCTATAGTTTCCCTA 3392094
Query 7898 ACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAA-CCACCAAAGAC 7956
| || | ||||||||| | ||| ||||||| | ||||| ||||| || ||||| ||
Sbjct 3392095 ATCAAACTAGAGGTTACCAAAGAAGCATGCATAAAATTGAAC-GAGAAGCCCCCAAATAC 3392153
Query 7957 ACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCT 8008
|||| | | | |||||| || |||||| || |||||||||||| ||
Sbjct 3392154 ACCAACTATCTCTGACATGTGAAATAAGTGCATAAGAATGTTGTGCTCTACT 3392205
>seq155
Length=2184526
Score = 154 bits (170), Expect = 2e-32
Identities = 346/510 (68%), Gaps = 15/510 (3%)
Strand=Plus/Plus
Query 6720 CCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGC 6779
||||||| ||||| ||||| | |||| | || || || || | | | | ||||
Sbjct 252593 CCATCATTTGAAATGGGTTCAATGTCCGATAATGAAACCCTTGGAAAGAAATGATAAAGC 252652
Query 6780 GGAATATCGCTGCAACACCAAACGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGAT 6839
||||| ||||| | |||||| || |||||||||||||||||||| || || ||||
Sbjct 252653 AAAATATAGCTGCTATACCAAAATTAGGTGCAAAGAACCAACTGGACTGACCTAGCGGAT 252712
Query 6840 ACATGAGAAAGACAGACACAAAGACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGG 6899
| || || || ||||| ||| |||| |||||| | || | ||||||||| || |
Sbjct 252713 AAAT-TGAGAG-----TACAAAAACAACAATTGGACCATAGAATGTGATTGCATTATAAG 252766
Query 6900 GACGAATACCGACTAGA-CGTGCGATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCA 6958
| || | | || ||| | || | ||||| || || | |||||||||||| || |
Sbjct 252767 GTCGCA-ATTGAACAGATTGAGCAAGTTCAAATTGACGTA-CATGAAACCTATTAGTTTA 252824
Query 6959 AAGGCTCCGTGGAGCGCCACAAAAGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAA 7018
|| || || ||||| |||||||||| ||| | | || | ||| | | | | |||
Sbjct 252825 AAAGCGCCATGGAGAGCCACAAAAGTCCACGGATCGCCTAATTG--ACATGAGTA--AAA 252880
Query 7019 TCTCCCTGAGCTTCTGGACCCCATAG-AAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGG 7077
||||| || || || || ||||||| || || | || |||| | | | | | ||||
Sbjct 252881 TCTCCTTGTGCATCAAGATCCCATAGTAACAACAAAGG-ATGTGCTAAACTATTAACAGG 252939
Query 7078 AGTTGATACAGCAGCAGTAAGGAAATTACATCCCTCAAGATACGAAGAAGCAATCCCGTG 7137
||| | || || || || | ||| |||||||| || | ||| ||| ||| | | ||
Sbjct 252940 AGTAAAAACTGCGGCGGTTAAGAAGTTACATCCGTCCAAATAGGAACTAGCCAATTCATG 252999
Query 7138 AGTGTACCAGCTCGTGACGAAAGTTGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGC 7197
||| |||| || || || ||||| || ||||||||||| | | || | || ||
Sbjct 253000 AGTATACCGTGAAGTTACAAAGGTTGTACCTGTGAGCCAACCACTTAAAGCGAAATATGC 253059
Query 7198 AGTAGGGAACAGAAGAAGACCTGACCAACC 7227
| ||| || || || |||| |||| |||
Sbjct 253060 ACAAGGAAAGAGCAGTTGACCGGACCGACC 253089
>seq77
Length=8408033
Score = 149 bits (164), Expect = 8e-31
Identities = 214/302 (71%), Gaps = 0/302 (0%)
Strand=Plus/Minus
Query 8114 GCAACTGGAGCAGAGTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGT 8173
||||| ||||| || ||||| ||| ||||| | | |||||||||||| || ||||
Sbjct 2698996 GCAACAGGAGCTGAATATGCAACAGCAATCCAAGAGCACATACCTAGACGAAAACTAAGT 2698937
Query 8174 TCCCACTCACGACCCATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGG 8233
|||||||||||||||||||| | | ||| | | |||||| | | || || |
Sbjct 2698936 TCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGTACAATTAGCTCA 2698877
Query 8234 AAAGGACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAG 8293
||||||| |||||||| | ||| ||||||| || | ||||||| | || || || |
Sbjct 2698876 TAAGGACCGCCGTTGTATAACCATTCATCAACTGATGATGCTTCCTACATTGGGTAAATA 2698817
Query 8294 TGGAGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATAC 8353
|| | ||| ||||| ||||| |||| || ||||| ||||| || ||||| |||||
Sbjct 2698816 TGCAAACCTATAGCTGAAGAAGTTGGAATAATGGCACCGGAGATAATATTGTTTCCATAA 2698757
Query 8354 ATGAGCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACG 8413
| || || | | | |||| || || || ||||| || | ||||||||||| | |
Sbjct 2698756 AGTAGAGATCTGGAAATAGGTTTGCGAATACCATCAATATCTATTGGAGGAGCAGCCATG 2698697
Query 8414 AA 8415
||
Sbjct 2698696 AA 2698695
>seq85
Length=5226098
Score = 140 bits (154), Expect = 4e-28
Identities = 134/172 (78%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593
|| ||| ||||| ||||||||||| |||||||||| || ||||| |||||||| |||||
Sbjct 1123183 AGTAGCTAGGTCTAGAGGGAAGTTATGAGCATTACATTCATGCATAACTTCCATACCAAG 1123242
Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653
||||| || | | || |||| || || | ||||||||||||| ||||| |
Sbjct 1123243 GTTAGCACAATTAATAATATCAACCCATGTATTAATTACACGACCTTGACTATCAACTAC 1123302
Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCA 7705
||| |||||||| |||||||| || |||||||| ||||| ||||| | ||||
Sbjct 1123303 GGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCA 1123354
>seq31544
Length=164
Score = 122 bits (134), Expect = 1e-22
Identities = 106/132 (80%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588
||| ||||||| ||||| ||||||||||| ||||||||||| || ||||| ||||||||
Sbjct 132 TCAACAGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 73
Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCA 7648
|||||| |||||| || | | || |||||||| || | ||||||||||||| ||||
Sbjct 72 CCAAGATTAGCACGATTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCA 13
Query 7649 ATGATGGACTGG 7660
| | ||| |||
Sbjct 12 ACTACGGATTGG 1
>seq134
Length=15115857
Score = 100 bits (110), Expect = 4e-16
Identities = 169/243 (70%), Gaps = 5/243 (2%)
Strand=Plus/Plus
Query 8235 AAGGACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGT 8294
|||||| ||||||| | ||| ||||||| ||| ||||||||||| || | || || |
Sbjct 3765759 AAGGACTGTCGTTGTATAACCATTCATCAACAGATGCTGCTTCCCATATTGAGTAAAAAT 3765818
Query 8295 GGAGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACA 8354
| | ||| |||| ||| || ||||| || || || | || || ||||| ||||| |
Sbjct 3765819 GCAAACCTATAGTTGTAGGAGTAGGAATAATGCCATCATAAATAATATTGTTACCATAAA 3765878
Query 8355 TGAGCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGA 8414
|| || |||| | || | || ||| || ||||| || || ||||||||| | | ||
Sbjct 3765879 GTAGAGATCCAGAAATAGGCTTACAGATACCATCAATATCAACTGGAGGAGCAACAATGA 3765938
Query 8415 AAGCGACGATGAAACAAATAGCAGC--AGCGAGCAGCGTAGGAATCATCAGGACACCGAA 8472
| | | || | | | |||| ||| || | | ||||| ||||||| ||||| ||
Sbjct 3765939 A---GGCAATAATAAATATAGAAGCTGAGTCAATAAGGTAGGGATCATCAAAACACCAAA 3765995
Query 8473 CCA 8475
|||
Sbjct 3765996 CCA 3765998
>seq151
Length=2833985
Score = 89.7 bits (98), Expect = 6e-13
Identities = 87/111 (78%), Gaps = 2/111 (2%)
Strand=Plus/Minus
Query 7739 GCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGA 7798
|| || ||||||||||| | |||||| || |||||||| ||| ||| |||||||||
Sbjct 2328121 GCAGCTAGGAAGAAGTGTAACGAACGAGAATTGTTGAAACTAGCATATAGGAAGATCAAT 2328062
Query 7799 CGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGA 7849
|| ||||| || || |||||||| ||||| || || || ||||| |||||
Sbjct 2328061 CGGCCAAAATAACCATGAGCAGCTACGATATTATAAGTTTCTTC--CTTGA 2328013
>seq7573
Length=101
Score = 86.0 bits (94), Expect = 8e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 7613 TCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGATGGACTGGTTGAAGTTGAAA 7672
|| |||||||| || | ||||||||||||| ||||| | ||| |||||||| ||||||
Sbjct 9 TCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGATTGGTTGAAATTGAAA 68
Query 7673 CCGTTGAGGTTGAATGCCATGGTGCTAACACC 7704
|| || ||||| || ||||| ||||| | |||
Sbjct 69 CCATTTAGGTTTAAAGCCATAGTGCTGATACC 100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 621841919853440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |