Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Metrosideros_20polymorpha_20var._20glaberrima_20[genbank_20GCA_5F001
662345.1_202016-04-28] 36,376 sequences; 304,365,553 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq161 120 4e-22
>seq161
Length=5110746
Score = 120 bits (132), Expect = 4e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || || || ||||| ||||||||||| || |||| || || |||||||| ||
Sbjct 1384383 TGGAGGCCCTCGTCCCGGGAGATGAGCTCGTTCGAGAAGGTGAGCCCCGGCATGAGGCCG 1384324
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| ||||| ||||| |||||||| || ||||| || || |||||||||||||| || |||
Sbjct 1384323 CGCTTCTTGAGCCAGAAGATGGCGCAGAAACTGCCGGAGAAGAAGATGCCCTCGACGCAG 1384264
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTCGAACCACTTGAGAGCCCA 119686
||||| |||| || ||||| || || | ||| | ||||| ||| ||| |||||
Sbjct 1384263 GCGAAGGCGAGGAGGCGCTCGGCGAAGGACTCG-GCGCCGTCGACCCAGCGGAGGGCCCA 1384205
Query 119687 GTTGGCCTTACGCTCTATGCAGGGGACAGT 119716
|| ||||| || | | | |||||| ||
Sbjct 1384204 GTCCGCCTTGCGAGCGACGGCGGGGACGGT 1384175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588708192612800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |